EY680046

Overview
NameEY680046
Unique NameEY680046
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY680046 vs. ExPASy Swiss-Prot
Match: Y3314_ARATH (Uncharacterized protein At3g63140, chloroplastic OS=Arabidopsis thaliana GN=At3g63140 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.412e-53
Identity = 98/124 (79.03%), Postives = 109/124 (87.90%), Query Frame = 1 
Query:  154 SSRRSSVSAFTVKASAA-EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLNTVRPVANWAKSSG 522
            +SRR S   FTVKAS+  EKK VLIVNTNSGGHAVIGFY AKELL +GH VTI+TVGDE+S+KMKKPPFNRF+EIVS GGKTVWG+PA V NVVGG TFDVVLDNNGK+L+TVRPV +WAKSSG
Sbjct:   60 TSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDESSEKMKKPPFNRFSEIVSGGGKTVWGNPANVANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSG 183

HSP 2 Score: 30.4166 bits (67), Expect = 7.412e-53
Identity = 23/62 (37.10%), Postives = 34/62 (54.84%), Query Frame = 3 
Query:  531 KFLFITCAGIYKPI*QTLLMSKGNVVNPRPFGHVQVEKQISKKFKKQGTLSAPNTLIDLGNS 716
            +FLFI+ AGIYK   Q   + +G+ V     GHV VEK +++ F    +   P  +I  GN+
Sbjct:  186 QFLFISSAGIYKSTEQPPHV-EGDAVK-ADAGHVVVEKYLAETFGNWASF-RPQYMIGSGNN 244
The following BLAST results are available for this feature:
BLAST of EY680046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y3314_ARATH7.412e-5379.03Uncharacterized protein At3g63140, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-006-H01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680046 ID=EY680046; Name=EY680046; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGGTCCTCTCTTCTCTTGTCATCGCCACCATCAAAGCTTGC
TCAAGCTTCCCTCCCTCCTTCTCTGCGACTTTCTTTCTCGTCTTACTCTC
ACTTGTCTTCTCTTGTCTCCATTTCACCTTCTTCGTTCCTTGCATGTCCT
GCAAGTTCAAGACGATCCTCTGTCTCTGCCTTCACTGTCAAGGCCAGTGC
CGCGGAGAAGAAGAAGGTCCTCATAGTCAACACAAACAGTGGTGGGCATG
CAGTTATTGGGTTCTATCTCGCGAAAGAGCTCCTGGGTTCTGGCCATGAG
GTCACTATCATGACTGTTGGTGATGAGAATTCTGACAAAATGAAGAAGCC
TCCTTTTAACAGATTCAACGAAATTGTGAGTGCTGGAGGCAAGACGGTGT
GGGGAGACCCGGCGGAAGTTGGGAACGTTGTGGGTGGGGTTACATTCGAT
GTGGTTCTGGATAACAATGGCAAAAACCTAAACACTGTGAGGCCTGTGGC
AAATTGGGCTAAGAGTTCCGGGCGTGAAGCAAATTCTTGTTCATCACCTG
TGCTGGAATTTACAAACCAATCTGACAAACCCTCCTAATGTCCAAAGGGA
ATGTAGTTAACCCCCGACCCTTCGGCCACGTACAGGTGGAAAAACAAATA
TCCAAAAAATTTAAAAAACAGGGGACCCTCAGCGCCCCCAATACACTAAT
TGATCTCGGGAACAGTGCCGGGCGGCCTAGTACTGTCTTCCTCGAGCACA
AATAAACACAAGGTACCACAAGGCATTTTAAGGAATGAAGACAGCTCATA
TACTCGACAATTAACCTGGAAACTGGATTAAGACGCAGCACGACGCAAAT
ACCAAGCACAAGCGTAGCACCAGGCAAGACGATTGAGCGAACCTAAAACA
A
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