EY680035

Overview
NameEY680035
Unique NameEY680035
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length281
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8645 contig Csv1_Contig8645:35..315. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
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BLAST of EY680035 vs. ExPASy Swiss-Prot
Match: PTFBC_ECOLI (PTS system fructose-specific EIIBC component OS=Escherichia coli (strain K12) GN=fruA PE=4 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.654e-13
Identity = 40/75 (53.33%), Postives = 46/75 (61.33%), Query Frame = -1 
Query:    3 YCVKFISRAIRLPQSXXXXXXXXXXXXXXXLFTGLAMIYLVGPPVAKMLTGLTDFLSTMGTTNAVLLGILLGGMM 227
            Y  K IS  ++LPQS               L  GLAMIYL+G PVA +L GLT +L TMGT NAVLLG +LGGMM
Sbjct:  328 YIAKLISTQLKLPQSMEALKPILIIPLISSLVVGLAMIYLIGKPVAGILEGLTHWLQTMGTANAVLLGAILGGMM 402
[Close]
BLAST of EY680035 vs. ExPASy Swiss-Prot
Match: PTF3E_RHOCA (PTS system fructose-specific EIIBBC component OS=Rhodobacter capsulatus GN=fruA PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.430e-11
Identity = 32/75 (42.67%), Postives = 46/75 (61.33%), Query Frame = -1 
Query:    3 YCVKFISRAIRLPQSXXXXXXXXXXXXXXXLFTGLAMIYLVGPPVAKMLTGLTDFLSTMGTTNAVLLGILLGGMM 227
            Y  +++  AI+LP++                 TGL M+Y+VG PVA +L  +T FL  +GTTNAV+LG++LGGMM
Sbjct:  343 YVARWLRDAIKLPRTLEGLKPVLILPLLSTAITGLIMVYVVGTPVAAILAAMTAFLQGLGTTNAVVLGLILGGMM 417
The following BLAST results are available for this feature:
BLAST of EY680035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PTFBC_ECOLI4.654e-1353.33PTS system fructose-specific EIIBC component OS=Es... [more]
PTF3E_RHOCA7.430e-1142.67PTS system fructose-specific EIIBBC component OS=R... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-006-G02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680035 ID=EY680035; Name=EY680035; organism=Citrus sinensis; type=EST; length=281bp
CACATCATGCCGCCCAACAAGATGCCCAGCAGCACGGCGTTGGTGGTGCC
CATGGTGCTGAGGAAATCCGTGAGGCCGGTAAGCATCTTCGCCACCGGCG
GCCCCACCAGGTAAATCATCGCCAGGCCCGTGAACAGGCTCGCCAGCAAC
GGGATGATCAGGATCGGCTTGAGGGCTTCGAGGCTCTGGGGCAAACGGAT
CGCACGACTGATGAATTTGACGCAGTAGCCGGCCAGGAAACCGGCGAAGA
TCCCGCCGATAAACCCCGCGCCCAAGGTGCT
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