EY680013

Overview
NameEY680013
Unique NameEY680013
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680013 vs. ExPASy Swiss-Prot
Match: PHOT2_ARATH (Phototropin-2 OS=Arabidopsis thaliana GN=PHOT2 PE=1 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 2.732e-56
Identity = 120/182 (65.93%), Postives = 134/182 (73.63%), Query Frame = 1
Query:    4 TREEILGRNCRFLQGPETDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVEPLRNRLSEKTEQQSAKIVKATAENVNEAVRELPDANLVRDQKTCGQFIHSLSFHGLIKETILRG*QFKRSLEVVKKL-------GYIISSQ*KPLGCGDTG 528
            +REEILGRNCRFLQGPETDQATV KIRDA+R+QREITVQLINYTKSGKKFWNLFHLQPMRD KGELQYFIGVQLDGSDHVEPL+NRLSE+TE QS+K+VKATA NV+EAVRELPDAN   +        HS   + L         +   S + +KK+       G       KPLG GDTG
Sbjct:  417 SREEILGRNCRFLQGPETDQATVQKIRDAIRDQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLQNRLSERTEMQSSKLVKATATNVDEAVRELPDANTRPEDLWAA---HSKPVYPLPHN------KESTSWKAIKKIQASGETVGLHHFKPIKPLGSGDTG 589          

HSP 2 Score: 117.087 bits (292), Expect = 1.462e-25
Identity = 67/132 (50.76%), Postives = 84/132 (63.64%), Query Frame = 3
Query:  363 RPEDLWAIHSQPVFPRPHKRDNSSWIAIQKITGSGEKIGLHHFKPIKTVGLW*HWQVNCML*RQWKNL*C*-------IVTRFPEHG--IEREIMSLLDLPFLPTLYASFQTSYHHLF*KQTFCPGGKVFCL 731
            RPEDLWA HS+PV+P PH ++++SW AI+KI  SGE +GLHHFKPIK +G      V+ +  +    L          ++ R   H   IEREI+SLLD PFLPTLYASFQTS H       FCPGG++F L
Sbjct:  535 RPEDLWAAHSKPVYPLPHNKESTSWKAIKKIQASGETVGLHHFKPIKPLGSGDTGSVHLVELKGTGELYAMKAMEKTMMLNRNKAHRACIEREIISLLDHPFLPTLYASFQTSTHVCL-ITDFCPGGELFAL 665          

HSP 3 Score: 87.8113 bits (216), Expect = 9.501e-17
Identity = 44/117 (37.61%), Postives = 71/117 (60.68%), Query Frame = 1
Query:   10 EEILGRNCRFLQGPETDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVEPLR------NRLSEKTEQQSAKIVKATAENVNEAVREL 342
            +EI+GRNCRFLQGP+TD+  V+KIRD V+  +    +L+NY K G  FWNL  + P++D +G    FIG+Q++ S + E +       N LS+   +  A+  +   +++ E V+ +
Sbjct:  163 KEIVGRNCRFLQGPDTDKNEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQVEVSKYTEGVNDKALRPNGLSKSLIRYDARQKEKALDSITEVVQTI 279          
BLAST of EY680013 vs. ExPASy Swiss-Prot
Match: PHOT1_ARATH (Phototropin-1 OS=Arabidopsis thaliana GN=PHOT1 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.963e-46
Identity = 100/176 (56.82%), Postives = 121/176 (68.75%), Query Frame = 1
Query:    4 TREEILGRNCRFLQGPETDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVEPLRNRLSEKTEQQSAKIVKATAENVNEAVRELPDANLVRDQKTCGQFIHSLSFH-GLIKETILRG*QFKRSLEVVKKLGYIISSQ*KPLGCGDTG 528
            +REEILGRNCRFLQGPETD  TV KIR+A+  Q E+TVQLINYTKSGKKFWN+FHLQPMRD KGE+QYFIGVQLDGS HVEP+RN + E   ++   +VK TA N++EAVRELPDAN+  +        HS   H    ++        ++ LE  + +G       KPLG GDTG
Sbjct:  503 SREEILGRNCRFLQGPETDLTTVKKIRNAIDNQTEVTVQLINYTKSGKKFWNIFHLQPMRDQKGEVQYFIGVQLDGSKHVEPVRNVIEETAVKEGEDLVKKTAVNIDEAVRELPDANMTPEDLWAN---HSKVVHCKPHRKDSPPWIAIQKVLESGEPIGLKHFKPVKPLGSGDTG 675          

HSP 2 Score: 92.0485 bits (227), Expect = 5.038e-18
Identity = 58/131 (44.27%), Postives = 75/131 (57.25%), Query Frame = 3
Query:  366 PEDLWAIHSQPVFPRPHKRDNSSWIAIQKITGSGEKIGLHHFKPIKTVGLW*HWQVNCML*RQWKNL*C*-------IVTRFPEHGI--EREIMSLLDLPFLPTLYASFQTSYHHLF*KQTFCPGGKVFCL 731
            PEDLWA HS+ V  +PH++D+  WIAIQK+  SGE IGL HFKP+K +G      V+ +       L          ++ R   H    EREI+ LLD PFLP LYASFQT   H+     + PGG++F L
Sbjct:  622 PEDLWANHSKVVHCKPHRKDSPPWIAIQKVLESGEPIGLKHFKPVKPLGSGDTGSVHLVELVGTDQLFAMKAMDKAVMLNRNKVHRARAEREILDLLDHPFLPALYASFQTK-THICLITDYYPGGELFML 751          

HSP 3 Score: 78.9518 bits (193), Expect = 4.413e-14
Identity = 41/116 (35.34%), Postives = 63/116 (54.31%), Query Frame = 1
Query:    4 TREEILGRNCRFLQGPETDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVEPLR------NRLSEKTEQQSAKIVKATAENVNEAV 333
            T +E++GRNCRFLQG  TD   ++KIR+ +        +++NY K G  FWNL  + P++D  G++  FIG+Q++ S H E  +      N L E   +  A+       +V E V
Sbjct:  225 TSKEVVGRNCRFLQGSGTDADELAKIRETLAAGNNYCGRILNYKKDGTSFWNLLTIAPIKDESGKVLKFIGMQVEVSKHTEGAKEKALRPNGLPESLIRYDARQKDMATNSVTELV 340          
BLAST of EY680013 vs. ExPASy Swiss-Prot
Match: LOVHK_PSESM (Blue-light-activated protein OS=Pseudomonas syringae pv. tomato GN=PSPTO_2896 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.914e-17
Identity = 44/98 (44.90%), Postives = 62/98 (63.27%), Query Frame = 1
Query:    4 TREEILGRNCRFLQGPETDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVEPLRNRLSEKTEQQSAKI 297
            T EEILG NCRFLQGP+TD A V  IRDA+ ++ +I+ ++INY K G  FWN   + P+ +  G+L YF   QLD S      R + +E+  +Q+ K+
Sbjct:   61 TAEEILGTNCRFLQGPDTDPAVVQSIRDAIAQRNDISAEIINYRKDGSSFWNALFISPVYNDAGDLIYFFASQLDIS------RRKDAEEALRQAQKM 152          
BLAST of EY680013 vs. ExPASy Swiss-Prot
Match: LOVHK_PSEU2 (Blue-light-activated protein OS=Pseudomonas syringae pv. syringae (strain B728a) GN=Psyr_2700 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.621e-16
Identity = 42/96 (43.75%), Postives = 61/96 (63.54%), Query Frame = 1
Query:   10 EEILGRNCRFLQGPETDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVEPLRNRLSEKTEQQSAKI 297
            EEI+G NCRFLQGP+TD+  V  IRDA+ ++ +I+ +++NY K G  FWN   + P+ +  GEL YF   QLD S      R R +E+  +Q+ K+
Sbjct:   63 EEIIGSNCRFLQGPDTDRTAVQSIRDAIDQRVDISTEILNYRKDGSSFWNALFISPVYNDAGELIYFFASQLDIS------RRRDAEEALRQAQKM 152          
BLAST of EY680013 vs. ExPASy Swiss-Prot
Match: LOVHK_PSE14 (Blue-light-activated protein OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=PSPPH_2483 PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.621e-16
Identity = 43/96 (44.79%), Postives = 61/96 (63.54%), Query Frame = 1
Query:   10 EEILGRNCRFLQGPETDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVEPLRNRLSEKTEQQSAKI 297
            EEI+G NCRFLQGPETD+A V  IR+A+ E+ +I+ +++NY K G  FWN   + P+ +  G+L YF   QLD S      R R +E   +Q+ K+
Sbjct:   63 EEIIGTNCRFLQGPETDRAVVQSIREAIDERVDISTEILNYRKDGSTFWNALFISPVYNDAGDLIYFFASQLDIS------RRRDAEDALRQAQKM 152          
BLAST of EY680013 vs. ExPASy Swiss-Prot
Match: LVHK1_ERYLH (Blue-light-activated histidine kinase 1 OS=Erythrobacter litoralis (strain HTCC2594) GN=ELI_02980 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.158e-16
Identity = 41/89 (46.07%), Postives = 54/89 (60.67%), Query Frame = 1
Query:    7 REEILGRNCRFLQGPETDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVEPLRNRLSEK 273
            REEI+GRNCRFLQG +TD   V K+R+ +  +R   V L+NY K G  FWN  H+ P+    G LQYF G Q D +D V   R   +++
Sbjct:   77 REEIVGRNCRFLQGADTDPEQVRKLREGIAAERYTVVDLLNYRKDGIPFWNAVHVGPIYGEDGTLQYFYGSQWDITDIVAERRKAETQR 165          
BLAST of EY680013 vs. ExPASy Swiss-Prot
Match: LOVHK_BRUSU (Blue-light-activated histidine kinase OS=Brucella suis GN=BRA0588 PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.340e-15
Identity = 35/73 (47.95%), Postives = 50/73 (68.49%), Query Frame = 1
Query:   10 EEILGRNCRFLQGPETDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLD 228
            +E++GRNCRFLQG  TD A V  I+ A+  ++ I + +INY KSG+ FWN  H+ P+ +  G LQ+F+  QLD
Sbjct:   62 DEVMGRNCRFLQGHGTDPAHVRAIKSAIAAEKPIDIDIINYKKSGEAFWNRLHISPVHNANGRLQHFVSSQLD 134          
BLAST of EY680013 vs. ExPASy Swiss-Prot
Match: LOVHK_BRUSI (Blue-light-activated histidine kinase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=BSUIS_B0585 PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.340e-15
Identity = 35/73 (47.95%), Postives = 50/73 (68.49%), Query Frame = 1
Query:   10 EEILGRNCRFLQGPETDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLD 228
            +E++GRNCRFLQG  TD A V  I+ A+  ++ I + +INY KSG+ FWN  H+ P+ +  G LQ+F+  QLD
Sbjct:   62 DEVMGRNCRFLQGHGTDPAHVRAIKSAIAAEKPIDIDIINYKKSGEAFWNRLHISPVHNANGRLQHFVSSQLD 134          
BLAST of EY680013 vs. ExPASy Swiss-Prot
Match: LOVHK_BRUO2 (Blue-light-activated histidine kinase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=BOV_A0554 PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.340e-15
Identity = 35/73 (47.95%), Postives = 50/73 (68.49%), Query Frame = 1
Query:   10 EEILGRNCRFLQGPETDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLD 228
            +E++GRNCRFLQG  TD A V  I+ A+  ++ I + +INY KSG+ FWN  H+ P+ +  G LQ+F+  QLD
Sbjct:   62 DEVMGRNCRFLQGHGTDPAHVCAIKSAIAAEKPIDIDIINYKKSGEAFWNRLHISPVHNANGRLQHFVSSQLD 134          
BLAST of EY680013 vs. ExPASy Swiss-Prot
Match: LOVHK_BRUME (Blue-light-activated histidine kinase OS=Brucella melitensis GN=BMEII0679 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.340e-15
Identity = 35/73 (47.95%), Postives = 50/73 (68.49%), Query Frame = 1
Query:   10 EEILGRNCRFLQGPETDQATVSKIRDAVREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLD 228
            +E++GRNCRFLQG  TD A V  I+ A+  ++ I + +INY KSG+ FWN  H+ P+ +  G LQ+F+  QLD
Sbjct:   62 DEVMGRNCRFLQGHGTDPAHVRAIKSAIAAEKPIDIDIINYKKSGEAFWNRLHISPVHNANGRLQHFVSSQLD 134          
The following BLAST results are available for this feature:
BLAST of EY680013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
PHOT2_ARATH2.732e-5665.93Phototropin-2 OS=Arabidopsis thaliana GN=PHOT2 PE=... [more]
PHOT1_ARATH1.963e-4656.82Phototropin-1 OS=Arabidopsis thaliana GN=PHOT1 PE=... [more]
LOVHK_PSESM1.914e-1744.90Blue-light-activated protein OS=Pseudomonas syring... [more]
LOVHK_PSEU21.621e-1643.75Blue-light-activated protein OS=Pseudomonas syring... [more]
LOVHK_PSE141.621e-1644.79Blue-light-activated protein OS=Pseudomonas syring... [more]
LVHK1_ERYLH6.158e-1646.07Blue-light-activated histidine kinase 1 OS=Erythro... [more]
LOVHK_BRUSU2.340e-1547.95Blue-light-activated histidine kinase OS=Brucella ... [more]
LOVHK_BRUSI2.340e-1547.95Blue-light-activated histidine kinase OS=Brucella ... [more]
LOVHK_BRUO22.340e-1547.95Blue-light-activated histidine kinase OS=Brucella ... [more]
LOVHK_BRUME2.340e-1547.95Blue-light-activated histidine kinase OS=Brucella ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-006-E04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680013 ID=EY680013; Name=EY680013; organism=Citrus sinensis; type=EST; length=929bp
AATACACGTGAAGAAATTTTGGGGAGAAACTGCAGGTTTCTTCAAGGACC
TGAAACAGATCAAGCAACTGTCTCAAAGATAAGAGATGCTGTCAGAGAAC
AAAGGGAAATTACCGTTCAGTTGATTAACTACACTAAGAGTGGAAAAAAA
TTCTGGAATTTATTCCACTTGCAACCAATGCGTGATCATAAGGGTGAACT
GCAATACTTCATTGGTGTCCAGCTAGACGGAAGTGATCATGTGGAACCCT
TGCGGAACCGCTTGTCAGAGAAAACAGAGCAACAAAGTGCAAAGATAGTC
AAGGCTACTGCAGAAAATGTTAATGAAGCTGTTCGAGAACTTCCTGACGC
CAACTTGGTAAGAGACCAGAAGACCTGTGGGCAATTCATTCACAGCCTGT
CTTTCCACGGCCTCATAAAAGAGACAATTCTTCGTGGATAGCAATTCAAA
AGATCACTGGAAGTGGTGAAAAAATTGGGCTACATCATTTCAAGCCAATA
AAAACCGTTGGGCTGTGGTGACACTGGCAGGTGAACTGTATGCTATGAAG
GCAATGGAAAAATCTGTAATGTTGAATCGTAACAAGGTTTCCCGAGCATG
GCATTGAAAGGGAAATCATGTCACTACTGGATCTCCCTTTTCTTCCCACT
CTTTACGCCTCCTTTCAGACTTCCTACCACCATTTGTTTTGAAAACAAAC
CTTTTGCCCGGGGGGAAAAGTTTTTTGCCTTGGTTGACAAGCCGCCCTAT
GAAAAATATTTAAAAAGGGAATTCCCCTTAGGTCCTTATGCACCAAAAGG
TTGGTCCTTGGGCTTGGAAAAATTCTCCCCCTGGGTTTAAATTATTAAAG
CCCTGGCCCCCCTCCAAGAGGGTGGGGAAAAAAATTCTAGGGGATCCCCC
CCCCCCCGCCCCAACATTTTTTTGGGGAA
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