EY680012

Overview
NameEY680012
Unique NameEY680012
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length931
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY680012 vs. ExPASy Swiss-Prot
Match: SSG1_ANTMA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Antirrhinum majus GN=WAXY PE=2 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 2.384e-84
Identity = 149/200 (74.50%), Postives = 175/200 (87.50%), Query Frame = 2 
Query:    2 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGNEPGIDGEEIAPLAKE 601
            FIGRLEEQKGSDIL AAI  F+  +VQII+LGTGKK  E+Q+++LE+LYP+KARGVAKFN+PLAHMI AGADF+L+PSRFEPCGLIQLHAMRYGT+PI ASTGGLVDTV EGFTGF MG+F+V+C  VDP DV  ++TTV RALA YG+ A  EM++N MAQDLSWKGPAK WE+ LL+L V+G+EPG+DGEEIAPLAKE
Sbjct:  404 FIGRLEEQKGSDILVAAISKFVGLDVQIIILGTGKKKFEQQIQELEVLYPDKARGVAKFNVPLAHMITAGADFMLVPSRFEPCGLIQLHAMRYGTIPICASTGGLVDTVTEGFTGFHMGAFNVECATVDPADVQKIATTVERALAAYGSVAYKEMIQNCMAQDLSWKGPAKNWEKMLLSLGVSGSEPGVDGEEIAPLAKE 603
[Close]
BLAST of EY680012 vs. ExPASy Swiss-Prot
Match: SSG1_MANES (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 5.311e-84
Identity = 149/200 (74.50%), Postives = 172/200 (86.00%), Query Frame = 2 
Query:    2 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGNEPGIDGEEIAPLAKE 601
            FIGRLEEQKGSDI  AAI   ++ NVQI++LGTGKK  EKQ+E LE+LYP+KARGVAKFN+PLAHMI AGADF+L+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EG+TGFQMG+  V+C+ +D  DVAA+  TV RAL TY T AL EM+ N MAQDLSWKGPA+ WE+ LL+LEV G+EPG +GEEIAPLAKE
Sbjct:  404 FIGRLEEQKGSDIFVAAISQLVEHNVQIVILGTGKKKFEKQIEHLEVLYPDKARGVAKFNVPLAHMITAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGYTGFQMGALHVECDKIDSADVAAIVKTVARALGTYATAALREMILNCMAQDLSWKGPARMWEKMLLDLEVTGSEPGTEGEEIAPLAKE 603
[Close]
BLAST of EY680012 vs. ExPASy Swiss-Prot
Match: SSG1_IPOBA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Ipomoea batatas GN=WAXY PE=2 SV=2)

HSP 1 Score: 308.531 bits (789), Expect = 3.442e-83
Identity = 151/200 (75.50%), Postives = 173/200 (86.50%), Query Frame = 2 
Query:    2 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGNEPGIDGEEIAPLAKE 601
            FIGRLEEQKGSDIL AAI  FI  +VQI++LGTGKK  E+Q+EQLE++YP+KARGVAKFN+PLAHMI AGADF+LIPSRFEPCGLIQLHAMRYGT  I ASTGGLVDTV+EG+TGF MG+F+VDCE VDP DV  V TTV RALA YGT A  EM+KN M+Q+LSWKGPAK WE  LL+L VAG+EPG++G+EIAPLAKE
Sbjct:  404 FIGRLEEQKGSDILYAAISKFISMDVQILILGTGKKKFEQQIEQLEVMYPDKARGVAKFNVPLAHMITAGADFMLIPSRFEPCGLIQLHAMRYGTPCICASTGGLVDTVKEGYTGFHMGAFNVDCETVDPEDVLKVITTVGRALAMYGTLAFTEMIKNCMSQELSWKGPAKNWETVLLSLGVAGSEPGVEGDEIAPLAKE 603
[Close]
BLAST of EY680012 vs. ExPASy Swiss-Prot
Match: SSG1_SOLTU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum GN=WAXY PE=1 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 7.669e-83
Identity = 148/200 (74.00%), Postives = 173/200 (86.50%), Query Frame = 2 
Query:    2 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGNEPGIDGEEIAPLAKE 601
            FIGRLEEQKGSDIL AAI  FI  +VQI+VLGTGKK  E+++EQLE+LYP KA+GVAKFN+PLAHMI AGADF+L+PSRFEPCGLIQLHAMRYGTVPI ASTGGLVDTV+EG+TGF MG+F+V+C+ VDP DV  + TTV RALA YGT A AEM+KN M+++LSWK PAKKWE  LL L  +G+EPG++GEEIAPLAKE
Sbjct:  403 FIGRLEEQKGSDILVAAIHKFIGLDVQIVVLGTGKKEFEQEIEQLEVLYPNKAKGVAKFNVPLAHMITAGADFMLVPSRFEPCGLIQLHAMRYGTVPICASTGGLVDTVKEGYTGFHMGAFNVECDVVDPADVLKIVTTVARALAVYGTLAFAEMIKNCMSEELSWKEPAKKWETLLLGLGASGSEPGVEGEEIAPLAKE 602
[Close]
BLAST of EY680012 vs. ExPASy Swiss-Prot
Match: SSG1B_HORVU (Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.497e-78
Identity = 144/200 (72.00%), Postives = 165/200 (82.50%), Query Frame = 2 
Query:    2 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGNEPGIDGEEIAPLAKE 601
            FIGRLEEQKGSDIL AA P F++ENVQIIVLGTGKK ME++L  LE+ YP+ ARG+AKFN+PLAHM+ AGADFI+IPSRFEPCGLIQL  M YG VPI +STGGLVDTV EG TGF MGSF+V+ E VDP DVAAV + V RAL  Y T     M++N MAQDLSWKGPAKKWEE LL+L V G++PGI+GEEIAPLAK+
Sbjct:  361 FIGRLEEQKGSDILIAASPEFVEENVQIIVLGTGKKKMEEELMLLEVKYPQNARGIAKFNVPLAHMMFAGADFIIIPSRFEPCGLIQLQGMSYGVVPICSSTGGLVDTVREGVTGFHMGSFNVEFETVDPTDVAAVGSNVTRALKQYRTPVFHAMVQNCMAQDLSWKGPAKKWEEALLSLGVEGSQPGIEGEEIAPLAKQ 560
[Close]
BLAST of EY680012 vs. ExPASy Swiss-Prot
Match: SSG1_PEA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 1.267e-77
Identity = 145/200 (72.50%), Postives = 164/200 (82.00%), Query Frame = 2 
Query:    2 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGNEPGIDGEEIAPLAKE 601
            FIGRLEEQKGSDIL  AI  F  ENVQI+VLGTGKK MEKQ+E LE  YP KA G+ KFN PLAH IIAGADFI+IPSRFEPCGL+QLHAM YGTVPIV+STGGLVDTV+EG+TGF  G F V+CE VDP DV  ++ TV+RAL TYGTQA+ +++ N MAQ+ SWK PAK WE+ LLNLEV GN  GIDG+EIAPLAKE
Sbjct:  399 FIGRLEEQKGSDILVEAIAKFADENVQIVVLGTGKKIMEKQIEVLEEKYPGKAIGITKFNSPLAHKIIAGADFIVIPSRFEPCGLVQLHAMPYGTVPIVSSTGGLVDTVKEGYTGFHAGPFDVECEDVDPDDVDKLAATVKRALKTYGTQAMKQIILNCMAQNFSWKKPAKLWEKALLNLEVTGNVAGIDGDEIAPLAKE 598
[Close]
BLAST of EY680012 vs. ExPASy Swiss-Prot
Match: SSG1_ARATH (Probable granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=WAXY PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 6.288e-77
Identity = 141/200 (70.50%), Postives = 165/200 (82.50%), Query Frame = 2 
Query:    2 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGNEPGIDGEEIAPLAKE 601
            FIGRLEEQKGSDIL  AI  F+  NVQ+++LGTGKK ME Q+ +LE  +P KA GVAKFN+PLAHMI AGADFI++PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV++G+TGF +G F+V CE VDP DV A +  V RA+A YGT A+ EM+KN M QD SWKGPA+ WE+ LL+L VAG+E G +GEEIAPLAKE
Sbjct:  406 FIGRLEEQKGSDILVEAISKFMGLNVQMVILGTGKKKMEAQILELEEKFPGKAVGVAKFNVPLAHMITAGADFIIVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKDGYTGFHIGRFNVKCEVVDPDDVIATAKAVTRAVAVYGTSAMQEMVKNCMDQDFSWKGPARLWEKVLLSLNVAGSEAGTEGEEIAPLAKE 605
[Close]
BLAST of EY680012 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa GN=WAXY PE=3 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 1.039e-71
Identity = 133/200 (66.50%), Postives = 156/200 (78.00%), Query Frame = 2 
Query:    2 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGNEPGIDGEEIAPLAKE 601
            FIGRLEEQKG D++AAAIP  ++ENVQI++LGTGKK  EK L+ +E  YP K R V KFN PLAH+I+AGAD + +PSRFEPCGLIQL  MRYGT    ASTGGLVDTV EG TGF MG  SVDC+ V+P DV  V+TT++RA+   GT A  EM++N M QDLSWKGPAK WE  LL L VAG+EPG++GEEIAPLAKE
Sbjct:  402 FIGRLEEQKGPDVMAAAIPELMQENVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVQKVATTLKRAIKIVGTPAYNEMVRNCMNQDLSWKGPAKNWENVLLGLGVAGSEPGVEGEEIAPLAKE 601
[Close]
BLAST of EY680012 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSJ (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=WAXY PE=1 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 7.445e-70
Identity = 130/200 (65.00%), Postives = 154/200 (77.00%), Query Frame = 2 
Query:    2 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGNEPGIDGEEIAPLAKE 601
            FIGRLEEQKG D++AAAIP  ++E+VQI++LGTGKK  EK L+ +E  YP K R V KFN PLAH+I+AGAD + +PSRFEPCGLIQL  MRYGT    ASTGGLVDTV EG TGF MG  SVDC+ V+P DV  V+ T++RA+   GT A  EM++N M QDLSWKGPAK WE  LL L VAG+ PGI+G+EIAPLAKE
Sbjct:  405 FIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIEGDEIAPLAKE 604
[Close]
BLAST of EY680012 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSI (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=WAXY PE=3 SV=2)

HSP 1 Score: 264.233 bits (674), Expect = 7.445e-70
Identity = 130/200 (65.00%), Postives = 154/200 (77.00%), Query Frame = 2 
Query:    2 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGNEPGIDGEEIAPLAKE 601
            FIGRLEEQKG D++AAAIP  ++E+VQI++LGTGKK  EK L+ +E  YP K R V KFN PLAH+I+AGAD + +PSRFEPCGLIQL  MRYGT    ASTGGLVDTV EG TGF MG  SVDC+ V+P DV  V+ T++RA+   GT A  EM++N M QDLSWKGPAK WE  LL L VAG+ PGI+G+EIAPLAKE
Sbjct:  405 FIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIEGDEIAPLAKE 604
The following BLAST results are available for this feature:
BLAST of EY680012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 361
Match NameE-valueIdentityDescription
SSG1_ANTMA2.384e-8474.50Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_MANES5.311e-8474.50Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_IPOBA3.442e-8375.50Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_SOLTU7.669e-8374.00Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1B_HORVU1.497e-7872.00Granule-bound starch synthase 1b, chloroplastic/am... [more]
SSG1_PEA1.267e-7772.50Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_ARATH6.288e-7770.50Probable granule-bound starch synthase 1, chloropl... [more]
SSG1_ORYSA1.039e-7166.50Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_ORYSJ7.445e-7065.00Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_ORYSI7.445e-7065.00Granule-bound starch synthase 1, chloroplastic/amy... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-006-E03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680012 ID=EY680012; Name=EY680012; organism=Citrus sinensis; type=EST; length=931bp
CTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCAGATATTCTTGCAGCTG
CCATTCCCCATTTCATCAAAGAGAATGTTCAGATAATAGTCCTTGGTACT
GGCAAAAAACCAATGGAGAAGCAGCTTGAACAGTTGGAGATACTGTACCC
TGAGAAAGCCAGAGGAGTAGCGAAATTCAATATTCCTCTGGCGCATATGA
TAATAGCAGGAGCTGATTTTATTTTGATTCCAAGCAGATTTGAACCTTGT
GGTCTCATTCAATTACATGCCATGCGTTATGGAACCGTACCTATCGTGGC
TTCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACAGGATTCC
AGATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCAGTAGATGTG
GCTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCAACCTATGGTACTCA
AGCTTTGGCTGAAATGATGAAAAATGGCATGGCTCAAGATCTTTCATGGA
AAGGACCAGCTAAGAAATGGGAGGAGACCCTACTTAACCTGGAAGTTGCT
GGTAATGAACCTGGAATTGACGGCGAAGAAATTGCTCCTCTTGCCAAGGA
AAAATGTGGCCACTCCTTGATCGAGGCTACAAAAATCTCCACTTTTTATT
TTTGGACCGCAAACATGTTCCTGTAATTTCTCCCCACCCAAGATATTACT
TAAGGAAAAAACATAGGGTGGGCAGTATATGGCACAAGGCCCTTTTTTTC
AAAAATGGTTTGGGATTTGAAAACATTATTGTTTACCTTGGTATAAGGAA
AAAATTAAATTTCTGGTTTTTCAATTTTTTGGTAAAAGGGGCTCCTGAAG
GGGTTGTCCCCCCCCTTCCCCCGAAAAGGAAAAAATTTTCCCTTTGAAAC
AATTTTTTTAAGATTTTTAAAAAAAAAAAAA
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