EY744806

Overview
NameEY744806
Unique NameEY744806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length969
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6017 contig Csv1_Contig6017:99..1067. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY744806 vs. ExPASy Swiss-Prot
Match: Y4791_ARATH (Uncharacterized protein At4g17910 OS=Arabidopsis thaliana GN=At4g17910 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.120e-25
Identity = 53/130 (40.77%), Postives = 76/130 (58.46%), Query Frame = 2 
Query:  227 MVLRHLTSSFCPIDCYATDK--SLKKDDDLIGAPKNLSAYFATLMVDFLFILIPMTLFFTILADWAYIGS-FLGFMLFFATAAAKRFGSPPDLEHRIHSIRSFLTSYRVSTMLITCFCILAVDFKIFPKR 607
            ++LR+     C ID        S K DD+ I   +N   + A + +DF+FI+ PM LFFT+L++W Y G+  L  ++   +  AKR  S       + S R+ ++SYRV+ MLITC CILAVDF IFP+R
Sbjct:   10 VLLRYSIGFHCKIDNNGVKSVTSKKNDDEKIVISRN---WKAAISLDFIFIVFPMLLFFTVLSEWVYHGTGLLSLLVLILSVTAKRSFSGLQRGQSL-SFRASVSSYRVALMLITCLCILAVDFTIFPRR 135

HSP 2 Score: 35.4242 bits (80), Expect = 1.120e-25
Identity = 15/19 (78.95%), Postives = 16/19 (84.21%), Query Frame = 3 
Query:  597 FPKENAKTETYGTGLMDLG 653
            FP+  AKTETYGT LMDLG
Sbjct:  132 FPRRYAKTETYGTSLMDLG 150

HSP 3 Score: 35.039 bits (79), Expect = 1.120e-25
Identity = 18/40 (45.00%), Postives = 24/40 (60.00%), Query Frame = 1 
Query:  652 GVGSFVFANAILSQQPPNIQSKTW*ERPLNLLAPXFYLGF 771
            GVGSFV ANA++S+Q  ++ S  W    +   AP   LGF
Sbjct:  150 GVGSFVLANAVVSRQARDVSSGNW-ITGIKATAPLLLLGF 188
The following BLAST results are available for this feature:
BLAST of EY744806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4791_ARATH1.120e-2540.77Uncharacterized protein At4g17910 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-G04-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744806 ID=EY744806; Name=EY744806; organism=Citrus sinensis; type=EST; length=969bp
CCACGCGTCCGTAGACGGCGGCAAGCATTTCCGGCGGCACGCACGCGTTT
CTTCACCGATCAGAAAATGGAGAAATAGACTCACGGTGCATTAACTGATC
ACAACACTTGGGGGCCATTTTCACTTTTGTATTCATGGCGTCTTTCAACA
CAAGCAAGCAACTAAAAGAAGAGTACACACACTCCCTCTAGCTCATTTCT
TCATCATTTCCATTATTCATATTTCAATGGTTCTGCGACATTTAACCAGC
TCATTTTGCCCGATTGATTGCTACGCCACTGATAAGTCATTGAAGAAGGA
TGATGATTTGATTGGAGCTCCTAAGAATTTGAGTGCTTACTTTGCTACAT
TAATGGTGGATTTTCTCTTCATTCTCATTCCCATGACTTTATTTTTCACT
ATTCTAGCAGACTGGGCTTATATAGGGTCATTTTTGGGGTTTATGCTATT
TTTTGCAACGGCAGCAGCTAAAAGATTTGGTTCGCCTCCAGATTTGGAAC
ACAGAATCCATTCTATTAGGTCATTTTTAACATCATACCGAGTGTCTACG
ATGTTGATAACATGCTTCTGTATCTTGGCTGTTGACTTCAAAATATTTCC
CAAAAGAAAATGCTAAGACTGAAACTTATGGCACTGGGTTGATGGATCTA
GGGGGTTGGGTCCTTTGTGTTTGCAAATGCCATACTTTCCCAACAACCCC
CAAATATCCAATCAAAGACATGGTAAGAGCGCCCCTTAAACCTCCTGGCC
CCCCANTTTTACCTGGGGTTTGGGCCGAATGGTTTCTACAACAGGGGGGG
GAACAAACAGGGTTCTGGTGGGAAAAAATATGGGAGGCGCACGGGAAATT
TCCTTTTTTTAACCCCTGGGCGGGGGTATCCAAATTTCTTAAATCCCTAA
CTTTAAAAATTCCCCCCCCCAAAAAAATTTGGGGGGGAAATTCCTTGGGG
TTCACATAAATTTCTTATA
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