EY679973
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679973 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 360.533 bits (924), Expect = 7.633e-99 Identity = 193/259 (74.52%), Postives = 209/259 (80.69%), Query Frame = 2 Query: 2 KNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTKGGDRIGVCKGIFRNEHVAE*QLVKLCPHLSPGPIQLDFLWKP*GAKSKNDEGKESGSRGVWCWEKLAKTL*TSKETPPNISSNPRIKREKTSLNYG 778 KNF+SLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT+ DRIGVCKGIFR ++VA+ +VKL PG +DF ++ K GV + + K L SKE PP+ P++ +K L YG Sbjct: 147 KNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR-EDRIGVCKGIFRTDNVADDDIVKLVDTF-PGQ-SIDFFGALRARVYHDEVRKWVSEVGV---DTIGKKLVNSKEGPPSF-EQPKMTIDKL-LGYG 397
BLAST of EY679973 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 359.762 bits (922), Expect = 1.302e-98 Identity = 192/263 (73.00%), Postives = 209/263 (79.47%), Query Frame = 2 Query: 2 KNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTKGGDRIGVCKGIFRNEHVAE*QLVKLCPHLSPGPIQLDFLWKP*GAKSKNDEGKESGSRGVWCWEKLAKTL*TSKETPPNISSNPRIKREKTSLNYGKHVI 790 KNF+SLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT+ DRIGVCKGIFR ++V E +VK+ PG +DF ++ K GV + + K L SKE PP P++ +K L YG ++ Sbjct: 147 KNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR-EDRIGVCKGIFRTDNVPEEDIVKVVDQF-PGQ-SIDFFGALRARVYDDEVRKWVSEVGV---DTIGKKLVNSKEGPPTF-EQPKMTIDKL-LQYGNMLV 401
BLAST of EY679973 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 358.607 bits (919), Expect = 2.901e-98 Identity = 190/259 (73.36%), Postives = 207/259 (79.92%), Query Frame = 2 Query: 2 KNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTKGGDRIGVCKGIFRNEHVAE*QLVKLCPHLSPGPIQLDFLWKP*GAKSKNDEGKESGSRGVWCWEKLAKTL*TSKETPPNISSNPRIKREKTSLNYG 778 KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKE+NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT+ DR+GVCKGIFR ++V + +VK+ PG +DF ++ K GV E + K L S+E PP P++ EK + YG Sbjct: 138 KNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR-DDRVGVCKGIFRTDNVPDEDIVKIVDSF-PGQ-SIDFFGALRARVYDDEVRKWVSDTGV---ENIGKRLVNSREGPPEF-EQPKMTIEKL-MEYG 388
BLAST of EY679973 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 353.599 bits (906), Expect = 9.331e-97 Identity = 188/263 (71.48%), Postives = 209/263 (79.47%), Query Frame = 2 Query: 2 KNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTKGGDRIGVCKGIFRNEHVAE*QLVKLCPHLSPGPIQLDFLWKP*GAKSKNDEGKESGSRGVWCWEKLAKTL*TSKETPPNISSNPRIKREKTSLNYGKHVI 790 KNF++LPNIKVPLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCL INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM+KFYWAPT+ DRIG+C GIFR + V +VKL PG +DF ++ K + GV E++ + L SKE+PP P++ EK L YG ++ Sbjct: 144 KNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTR-EDRIGICTGIFRTDGVPFEDIVKLVDTF-PGQ-SIDFFGALRARVYDDEVRKWAVGVGV---ERIGRNLVNSKESPPTF-DQPKMTIEKL-LEYGNMLV 398
BLAST of EY679973 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 351.673 bits (901), Expect = 3.546e-96 Identity = 186/263 (70.72%), Postives = 209/263 (79.47%), Query Frame = 2 Query: 2 KNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTKGGDRIGVCKGIFRNEHVAE*QLVKLCPHLSPGPIQLDFLWKP*GAKSKNDEGKESGSRGVWCWEKLAKTL*TSKETPPNISSNPRIKREKTSLNYGKHVI 790 KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IKKGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT VQLPGMYNK ENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT+ DRIGVCKGIF+ ++V++ +VK+ PG +DF ++ K GS G+ E + K L S++ P P++ EK L YG ++ Sbjct: 137 KNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTR-DDRIGVCKGIFQTDNVSDESVVKIVDTF-PGQ-SIDFFGALRARVYDDEVRKWVGSTGI---ENIGKRLVNSRDGPVTF-EQPKMTVEKL-LEYGHMLV 391
BLAST of EY679973 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 351.288 bits (900), Expect = 4.631e-96 Identity = 190/263 (72.24%), Postives = 207/263 (78.71%), Query Frame = 2 Query: 2 KNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTKGGDRIGVCKGIFRNEHVAE*QLVKLCPHLSPGPIQLDFLWKP*GAKSKNDEGKESGSRGVWCWEKLAKTL*TSKETPPNISSNPRIKREKTSLNYGKHVI 790 KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI PIMMSAGELESGNAGEPAKLIRQRYREA+D+IKKGKM CL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKE+NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT+ DRIGVCKGIFR + V E +V+L PG +DF ++ + GV E +A+ L SKE PP P+I EK L YG ++ Sbjct: 143 KNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMSCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR-EDRIGVCKGIFRTDGVDEEHVVQLVDTF-PGQ-SIDFFGALRARVYDDEVRRWVSETGV---ENIARKLVNSKEGPPTF-EQPKITIEKL-LEYGHMLV 397
BLAST of EY679973 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 351.288 bits (900), Expect = 4.631e-96 Identity = 188/263 (71.48%), Postives = 206/263 (78.33%), Query Frame = 2 Query: 2 KNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTKGGDRIGVCKGIFRNEHVAE*QLVKLCPHLSPGPIQLDFLWKP*GAKSKNDEGKESGSRGVWCWEKLAKTL*TSKETPPNISSNPRIKREKTSLNYGKHVI 790 KNF++LPNIKVPLILGIWGGKGQGKSFQCELV AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IKKGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEEN RVPII TGNDFSTLYAPLIRDGRMEKFYWAPT+ DRIGVCKGIFR + + + +V L PG +DF ++ K S GV EK+ K L S+E PP + P + EK + YG ++ Sbjct: 147 KNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPTR-EDRIGVCKGIFRTDKIKDEDIVTLVDQF-PGQ-SIDFFGALRARVYDDEVRKFVESLGV---EKIGKRLVNSREGPP-VFEQPEMTYEKL-MEYGNMLV 401
BLAST of EY679973 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 349.362 bits (895), Expect = 1.760e-95 Identity = 190/263 (72.24%), Postives = 208/263 (79.09%), Query Frame = 2 Query: 2 KNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTKGGDRIGVCKGIFRNEHVAE*QLVKLCPHLSPGPIQLDFLWKP*GAKSKNDEGKESGSRGVWCWEKLAKTL*TSKETPPNISSNPRIKREKTSLNYGKHVI 790 KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN GEPAKLIRQRYREAADII KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT+ DRIGVCKGIFR ++V + +V+L PG +DF ++ K G GV E ++K L S+E PP P++ EK + YG ++ Sbjct: 135 KNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN-GEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR-EDRIGVCKGIFRTDNVPDEAVVRLVDTF-PGQ-SIDFFGALRARVYDDEVRKWVGEIGV---ENISKRLVNSREGPPTF-DQPKMTIEKL-MEYGHMLV 388
BLAST of EY679973 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 347.051 bits (889), Expect = 8.734e-95 Identity = 188/263 (71.48%), Postives = 208/263 (79.09%), Query Frame = 2 Query: 2 KNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTKGGDRIGVCKGIFRNEHVAE*QLVKLCPHLSPGPIQLDFLWKP*GAKSKNDEGKESGSRGVWCWEKLAKTL*TSKETPPNISSNPRIKREKTSLNYGKHVI 790 KNFM+LPN+KVPLILGIWGGKGQGKSFQCELVFAKM I+PIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMC L INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT+ DRIGVC GIFR+++VA+ +VKL PG +DF ++ K GV + + K L SKE PP P++ EK L YG ++ Sbjct: 147 KNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR-EDRIGVCIGIFRSDNVAKEDIVKLVDTF-PGQ-SIDFFGALRARVYDDEVRKWITGVGV---DSIGKKLVNSKEGPPTF-EQPKMTIEKL-LEYGNMLV 401
BLAST of EY679973 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 346.665 bits (888), Expect = 1.141e-94 Identity = 187/263 (71.10%), Postives = 203/263 (77.19%), Query Frame = 2 Query: 2 KNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTKGGDRIGVCKGIFRNEHVAE*QLVKLCPHLSPGPIQLDFLWKP*GAKSKNDEGKESGSRGVWCWEKLAKTL*TSKETPPNISSNPRIKREKTSLNYGKHVI 790 KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KGKMC L INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEEN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT+ DR+GVCKGIFR + V E + KL PG +DF ++ K GV + K L SKE PP P++ +K L YG ++ Sbjct: 149 KNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR-DDRVGVCKGIFRTDGVPEEDITKLVDTF-PGQ-SIDFFGALRARVYDDEVRKWISGVGV---DATGKKLVNSKEGPPTF-DQPKMSLDKL-LQYGNMLV 403 The following BLAST results are available for this feature:
BLAST of EY679973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY679973 ID=EY679973; Name=EY679973; organism=Citrus sinensis; type=EST; length=933bpback to top |