EY679953
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679953 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 5.493e-65 Identity = 138/216 (63.89%), Postives = 163/216 (75.46%), Query Frame = 3 Query: 123 PLSFNGSGAATS-VPSSSFFGTSLKKVSSRIPPSKVPSASFKITA-EVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITQNFMSLPKSRF-LSSWVYGEAKGKEKSFQCELVFPKMGINPIIKNGRKIERWQWREKPPKFIQGKGYVRETKIIQKKGKSWC 761 PLS NGSGA S VPS++FFG+SLKK +++ P K S +FKI A E+ E++QT KD+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDYISQGLR YNLDN MDG YIAPAFMDKLVVHIT+NF+SLP + L ++G KG+ KSFQCELVF KMGINPI+ + ++E E P K I+ + RE I KKGK C Sbjct: 15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWG-GKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE-PAKLIRQR--YREAADIIKKGKMCC 224
BLAST of EY679953 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 5.493e-65 Identity = 138/216 (63.89%), Postives = 163/216 (75.46%), Query Frame = 3 Query: 123 PLSFNGSGAATS-VPSSSFFGTSLKKVSSRIPPSKVPSASFKITA-EVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITQNFMSLPKSRF-LSSWVYGEAKGKEKSFQCELVFPKMGINPIIKNGRKIERWQWREKPPKFIQGKGYVRETKIIQKKGKSWC 761 PLS NGSGA S VPS++FFG+SLKK +++ P K S +FKI A E+ E++QT KD+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDYISQGLR YNLDN MDG YIAPAFMDKLVVHIT+NF+SLP + L ++G KG+ KSFQCELVF KMGINPI+ + ++E E P K I+ + RE I KKGK C Sbjct: 15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWG-GKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE-PAKLIRQR--YREAADIIKKGKMCC 224
BLAST of EY679953 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 2.087e-64 Identity = 134/220 (60.91%), Postives = 163/220 (74.09%), Query Frame = 3 Query: 123 PLSFNGSGAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITQNFMSLPKSRF-LSSWVYGEAKGKEKSFQCELVFPKMGINPIIKNGRKIERWQWREKPPKFIQGKGYVRETKIIQKKGKSWCAP*LNE 779 P + NGS ++ SVPSS+F G+SLKKV+SR SKV S S +I A VDE+KQT KDRWKGLA+D SDDQQDITRGKG VDSLFQAP G+GTH+A+MSSY+YIS GLR YN DN MDG YIAPAFMDKLVVHIT+NFM+LP + L ++G KG+ KSFQCELVF KM I+PI+ + ++E E P K I+ + RE I +KGK CA +N+ Sbjct: 15 PPNLNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWG-GKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGE-PAKLIRQR--YREAADIIRKGK-MCALFIND 229
BLAST of EY679953 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 9.696e-62 Identity = 132/214 (61.68%), Postives = 157/214 (73.36%), Query Frame = 3 Query: 126 LSFNGSGAATSVPSSSFFGTSLKKV-SSRIPPSKVPSASFKITA---EVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITQNFMSLPKSRF-LSSWVYGEAKGKEKSFQCELVFPKMGINPIIKNGRKIERWQWREKPPKFIQGKGYVRETKIIQKKGK 752 L+ NGSG S PSS+FFGTSLKKV SSR+P SK+ S SFKI A E++E +QT+ DRW+GLAYD SDDQQDITRGKG VDSLFQAPM GTHYAV+SS+ Y+S GLR YN DN DG YIAPAF+DKLVVHI +NFM+LP + L V+G KG+ KSFQCELVF KMGINPI+ + ++E E P K I+ + RE + KKGK Sbjct: 16 LNLNGSGGGASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWG-GKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE-PAKLIRQR--YREASDLIKKGK 225
BLAST of EY679953 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 235.728 bits (600), Expect = 2.821e-61 Identity = 135/223 (60.54%), Postives = 163/223 (73.09%), Query Frame = 3 Query: 126 LSFNGSGAATSVPSSSFFGTSLKK-VSSRIPPSKVPSASFKITA---EVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITQNFMSLPKSRF-LSSWVYGEAKGKEKSFQCELVFPKMGINPIIKNGRKIERWQWREKPPKFIQGKGYVRETKIIQKKGKSWCAP*LNE 779 L+ NGSGA S P+S+FFGTSLKK V+SR+P SKV + SFKI A E++E++QT KDRWKGLAYD SDDQQDITRGKG VD LFQAPM GTHYAVMSSY+Y+S GLR LDN DG YIAPAF+DKLVVHIT+NFM+LP + L ++G KG+ KSFQCELVF KMGINPI+ + ++E E P K I+ + RE + KGK CA +N+ Sbjct: 16 LNLNGSGAGASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLR--QLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWG-GKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE-PAKLIRQR--YREAADLIAKGK-MCALFIND 231
BLAST of EY679953 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 229.95 bits (585), Expect = 1.548e-59 Identity = 132/229 (57.64%), Postives = 160/229 (69.87%), Query Frame = 3 Query: 108 MAAAV---------PLSFNGSGA-ATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITQNFMSLPKSRF-LSSWVYGEAKGKEKSFQCELVFPKMGINPIIKNGRKIERWQWREKPPKFIQGKGYVRETKIIQKKGKSWC 761 MAAAV PLS NGSG+ A S P+S+F G + VS +K + SFK+ A V E+KQT DRW+GLAYD SDDQQDITRGKG VDS+FQAPMGTGTH+AV+SSY+Y+SQGLR YNLDN MDG YIAPAFMDKLVVHIT+NF++LP + L ++G KG+ KSFQCELV KMGINPI+ + ++E E P K I+ + RE + KKGK C Sbjct: 1 MAAAVSTVGAINRAPLSLNGSGSGAVSAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLA-VKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWG-GKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGE-PAKLIRQR--YREAADLIKKGKMCC 224
BLAST of EY679953 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 3.449e-59 Identity = 128/218 (58.72%), Postives = 153/218 (70.18%), Query Frame = 3 Query: 123 PLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITAE---VDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITQNFMSLPKSRF-LSSWVYGEAKGKEKSFQCELVFPKMGINPIIKNGRKIERWQWREKPPKFIQGKGYVRETKIIQKKGKSWC 761 PLS N S A TSVPS++FFG +LKKV + + KV + S +I AE VD KQT DRWKGL D SDDQQDITRGKG VDSLFQAP GTGTH+AV+ SY+Y+SQGLR YNLDN +DG YIAPAFMDKLVVHIT+NF+ LP + L ++G KG+ KSFQCELVF KMGINPI+ + ++E E P K I+ + RE I +KG C Sbjct: 15 PLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWG-GKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGE-PAKLIRQR--YREAAEIIRKGNMCC 228
BLAST of EY679953 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 2.919e-58 Identity = 127/222 (57.21%), Postives = 153/222 (68.92%), Query Frame = 3 Query: 111 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITAE---VDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITQNFMSLPKSRF-LSSWVYGEAKGKEKSFQCELVFPKMGINPIIKNGRKIERWQWREKPPKFIQGKGYVRETKIIQKKGKSWC 761 A PLS N S A TSVPS++FFG +LKKV + + KV + S +I AE D KQT DRWKGL D SDDQQDI RGKG VDSLFQAP GTGTH+AV+ SY+Y+SQGLR YN+DNT+DG YIAP+FMDKLVVHIT+NF+ LP + L V+G KG+ KSFQCELVF KMGINPI+ + ++E E P K I+ + RE I +KG C Sbjct: 11 ANKAPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNRSLRIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWG-GKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGE-PAKLIRQR--YREAAEIIRKGNICC 228
BLAST of EY679953 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 8.494e-58 Identity = 125/221 (56.56%), Postives = 153/221 (69.23%), Query Frame = 3 Query: 102 SLMAAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITQNFMSLPKSRF-LSSWVYGEAKGKEKSFQCELVFPKMGINPIIKNGRKIERWQWREKPPKFIQGKGYVRETKIIQKKGKSWC 761 S + A + N S VP+S+F G+ LK VSSR SK+ + +FKI AE DE KQT+KD+W+GLA+D SDDQQDITRGKG D LFQAPMGTGTH AV+SSY+YIS GLR Y+ DN +DG YIAPAFMDKL VHI +NF++LP + L V+G KG+ KSFQCELVF KMGINPI+ + ++E E P K I+ + RE I KKGK C Sbjct: 6 STIGAVNRTTLNNSNYGGLVPNSAFLGSRLK-VSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWG-GKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE-PAKLIRQR--YREAADIIKKGKMCC 221
BLAST of EY679953 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 9.391e-57 Identity = 125/220 (56.82%), Postives = 157/220 (71.36%), Query Frame = 3 Query: 111 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITA-EVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITQNFMSLPKSRF-LSSWVYGEAKGKEKSFQCELVFPKMGINPIIKNGRKIERWQWREKPPKFIQGKGYVRETKIIQKKGKSWC 761 A+ PLS N S A TSVPS++FFG SLKKV ++ + KV + + ++ A EVDE TK+DRWKGL + SDDQQDI RGKG VDSLFQAP GTGTH+A+M+SY+Y+SQ L+TY LDN +DG YIAPAFMDKLVVHIT+NF++LP + L V+G KG+ KSFQCELVF KMGINPI+ + ++E E P K I+ + RE I +KG C Sbjct: 11 ASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVSSPKVSNRNLRVVAQEVDE---TKEDRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWG-GKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGE-PAKLIRQR--YREAAEIIRKGNMCC 223 The following BLAST results are available for this feature:
BLAST of EY679953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY679953 ID=EY679953; Name=EY679953; organism=Citrus sinensis; type=EST; length=930bpback to top |