EY679949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679949 vs. ExPASy Swiss-Prot
Match: PSBR_ARATH (Photosystem II 10 kDa polypeptide, chloroplastic OS=Arabidopsis thaliana GN=PSBR PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.400e-18 Identity = 49/66 (74.24%), Postives = 57/66 (86.36%), Query Frame = 1 Query: 4 SSLSLKPAPFTVEKSAARGLPSL--AKTSFKIVAKG-GKIKTDKPYGVNGGMDLREGLDASGRKAK 192 SS++LKPA FTVEK+AARGLPSL A+ SFKIVA G KIKTDKP+G+NG MDLR+G+DASGRK K Sbjct: 8 SSVTLKPAGFTVEKTAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMDLRDGVDASGRKGK 73
BLAST of EY679949 vs. ExPASy Swiss-Prot
Match: PSBR_BRACM (Photosystem II 10 kDa polypeptide, chloroplastic OS=Brassica campestris GN=PSBR PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 6.353e-17 Identity = 47/67 (70.15%), Postives = 56/67 (83.58%), Query Frame = 1 Query: 4 SSLSLKPAPFTVEKSAARGLPSLAK---TSFKIVAKG-GKIKTDKPYGVNGGMDLREGLDASGRKAK 192 SS++LKPA FTVEK +ARGLPSL + +SF+IVA G KIKTDKP+GVNG MDLR+G+DASGRK K Sbjct: 8 SSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSMDLRDGVDASGRKGK 74
BLAST of EY679949 vs. ExPASy Swiss-Prot
Match: PSBR_TOBAC (Photosystem II 10 kDa polypeptide, chloroplastic OS=Nicotiana tabacum GN=PSBR PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 7.024e-16 Identity = 42/64 (65.62%), Postives = 54/64 (84.38%), Query Frame = 1 Query: 10 LSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMDLREGLDASGRKAK 192 +SLKPAPF+VEK+A +GLPSLA++S F++ A G K+KTDKPYG+NG M LR+G+DASGRK K Sbjct: 6 MSLKPAPFSVEKTAVKGLPSLARSSSSFRVQASGVKKLKTDKPYGINGSMSLRDGVDASGRKQK 69
BLAST of EY679949 vs. ExPASy Swiss-Prot
Match: PSBR_SOLTU (Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum tuberosum GN=PSBR PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.946e-15 Identity = 44/66 (66.67%), Postives = 55/66 (83.33%), Query Frame = 1 Query: 4 SSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMDLREGLDASGRKAK 192 SSLSLKP FT+EK++ +GLPSLA++S FK+VA G K+KTDKPYG+NG M LR+G+DASGRK K Sbjct: 7 SSLSLKPT-FTLEKTSVKGLPSLARSSSSFKVVASGVKKLKTDKPYGINGSMALRDGVDASGRKPK 71
BLAST of EY679949 vs. ExPASy Swiss-Prot
Match: PSBR_SOLLC (Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum lycopersicum GN=PSBR PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.854e-14 Identity = 43/66 (65.15%), Postives = 53/66 (80.30%), Query Frame = 1 Query: 4 SSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMDLREGLDASGRKAK 192 SSLSLKP FT+EK + +GLPSL ++S FK+VA G K+KTDKPYG+NG M LR+G+DASGRK K Sbjct: 7 SSLSLKPT-FTLEKISVKGLPSLTRSSSSFKVVASGVKKLKTDKPYGINGSMALRDGVDASGRKPK 71
BLAST of EY679949 vs. ExPASy Swiss-Prot
Match: PSBR_SPIOL (Photosystem II 10 kDa polypeptide, chloroplastic OS=Spinacia oleracea GN=PSBR PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 5.209e-11 Identity = 39/65 (60.00%), Postives = 50/65 (76.92%), Query Frame = 1 Query: 4 SSLSLKPAPFTVE-KSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMDLREGLDASGRK 186 SSLSLKP+ F V+ KSA +GLPSL+++S F + A G KIK DKP G+ GGM LR+G+D+SGRK Sbjct: 7 SSLSLKPSSFGVDTKSAVKGLPSLSRSSASFTVRASGVKKIKVDKPLGIGGGMKLRDGVDSSGRK 71 The following BLAST results are available for this feature:
BLAST of EY679949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY679949 ID=EY679949; Name=EY679949; organism=Citrus sinensis; type=EST; length=1008bpback to top |