EY679947

Overview
NameEY679947
Unique NameEY679947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8621 contig Csv1_Contig8621:14..736. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY679947 vs. ExPASy Swiss-Prot
Match: CHL1_ARATH (Nitrate/chlorate transporter OS=Arabidopsis thaliana GN=CHL1 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.253e-30
Identity = 62/120 (51.67%), Postives = 79/120 (65.83%), Query Frame = 1
Query:   31 PTAE-IPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMXXXXXXXXXXXXXXXXXXXXXXXHKVTGVKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYVYKDKR 387
            PT + +PL  + L+PQ+ +VG GEA  Y GQLDFFLRECPKGMK M                        K TG   PW+AD+LN+GRLY+FYWL+A+L ALNF+I+L F++WYVYK+KR
Sbjct:  453 PTVKTLPLGFYLLIPQYLIVGIGEALIYTGQLDFFLRECPKGMKGMSTGLLLSTLALGFFFSSVLVTIVEKFTGKAHPWIADDLNKGRLYNFYWLVAVLVALNFLIFLVFSKWYVYKEKR 572          
BLAST of EY679947 vs. ExPASy Swiss-Prot
Match: PTR5_ARATH (Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.571e-22
Identity = 54/126 (42.86%), Postives = 73/126 (57.94%), Query Frame = 1
Query:    7 RSHPLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMXXXXXXXXXXXXXXXXXXXXXXXHKVT--GVKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYVYK 378
            ++H L N+ T  IP+++FW VPQ+FLVG  E FT+IGQL+FF  + P  M+++                        KVT  G +  W+A NLN G L  F+WLLA LS LNF++YL  A+WY YK
Sbjct:  440 QTHNLYNEET--IPMTIFWQVPQYFLVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTAIAFGNYLSTFLVTLVTKVTRSGGRPGWIAKNLNNGHLDYFFWLLAGLSFLNFLVYLWIAKWYTYK 563          
BLAST of EY679947 vs. ExPASy Swiss-Prot
Match: PTR1_ARATH (Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.852e-16
Identity = 43/115 (37.39%), Postives = 64/115 (55.65%), Query Frame = 1
Query:   40 EIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMXXXXXXXXXXXXXXXXXXXXXXXHKVT--GVKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYVYK 378
            +I +S+FW +PQ+ L+G  E FT+IGQL+FF  + P  M+++                        K+T    K  W+ DNLN+G L  F++LLA LS LNF++YL  ++ Y YK
Sbjct:  449 QIHMSIFWQIPQYLLIGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVALGNYLSTVLVTVVMKITKKNGKPGWIPDNLNRGHLDYFFYLLATLSFLNFLVYLWISKRYKYK 563          
BLAST of EY679947 vs. ExPASy Swiss-Prot
Match: PTR3B_ARATH (Peptide transporter PTR3-B OS=Arabidopsis thaliana GN=PTR3-B PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.780e-15
Identity = 40/126 (31.75%), Postives = 68/126 (53.97%), Query Frame = 1
Query:    4 ARSHPLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMXXXXXXXXXXXXXXXXXXXXXXXHKVTGVK-KPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYVYK 378
            A  H LT+     IPLS+F L+PQ+ L+G  +AF  I +L+FF  + P+ MK++                        ++T  + + W+ +NLN+ RL ++Y   A+L+ LNF+++L   R+Y Y+
Sbjct:  439 AAEHGLTHQTAVPIPLSIFTLLPQYVLMGLADAFIEIAKLEFFYDQAPESMKSLGTSYTSTSMAVGYFMSSILLSSVSQITKKQGRGWIQNNLNESRLDNYYMFFAVLNLLNFILFLVVIRFYEYR 564          
BLAST of EY679947 vs. ExPASy Swiss-Prot
Match: PTR2_ARATH (Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13
Identity = 40/116 (34.48%), Postives = 59/116 (50.86%), Query Frame = 1
Query:   37 AEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMXXXXXXXXXXXXXXXXXXXXXXXHKVT--GVKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYVYK 378
            A +P+SV W +PQ+F++GA E F +IGQL+FF  + P  M+++                          T    ++ W++DNLN G L  F+WLLA LS +N  +Y   A  Y  K
Sbjct:  466 APVPISVLWQIPQYFILGAAEVFYFIGQLEFFYDQSPDAMRSLCSALALLTNALGNYLSSLILTLVTYFTTRNGQEGWISDNLNSGHLDYFFWLLAGLSLVNMAVYFFSAARYKQK 581          
BLAST of EY679947 vs. ExPASy Swiss-Prot
Match: PTR3A_ARATH (Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13
Identity = 36/126 (28.57%), Postives = 68/126 (53.97%), Query Frame = 1
Query:    4 ARSHPLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMXXXXXXXXXXXXXXXXXXXXXXXHKVTGVK-KPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYVYK 378
            A  H L +    ++PL++F L+PQF L+G  ++F  + +L+FF  + P+ MK++                        ++T  + + W+ +NLN+ RL  +Y   A+L+ +NFV++L   ++YVY+
Sbjct:  439 AADHGLIHQTGVKLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFMSSFLLSTVSEITKKRGRGWILNNLNESRLDYYYLFFAVLNLVNFVLFLVVVKFYVYR 564          
BLAST of EY679947 vs. ExPASy Swiss-Prot
Match: PTR2X_ARATH (Probable peptide transporter At1g52190 OS=Arabidopsis thaliana GN=At1g52190 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13
Identity = 42/123 (34.15%), Postives = 61/123 (49.59%), Query Frame = 1
Query:    4 ARSHPLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMXXXXXXXXXXXXXXXXXXXXXXXHKVT--GVKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARW 366
            A S    N+  A + +S  WLVPQ+ L G  EA T IGQ +FF  E PK M ++                       +++T    K+ W++DN+N+G    +YW+LAI+S +N VIY     W
Sbjct:  443 AISQGYANNSNAVVDISAMWLVPQYVLHGLAEALTAIGQTEFFYTEFPKSMSSIAASLFGLGMAVASLLASVVLNAVNELTSRNGKESWVSDNINKGHYNYYYWVLAIMSFIN-VIYYVICSW 564          
The following BLAST results are available for this feature:
BLAST of EY679947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
CHL1_ARATH2.253e-3051.67Nitrate/chlorate transporter OS=Arabidopsis thalia... [more]
PTR5_ARATH6.571e-2242.86Peptide transporter PTR5 OS=Arabidopsis thaliana G... [more]
PTR1_ARATH1.852e-1637.39Peptide transporter PTR1 OS=Arabidopsis thaliana G... [more]
PTR3B_ARATH7.780e-1531.75Peptide transporter PTR3-B OS=Arabidopsis thaliana... [more]
PTR2_ARATH1.916e-1334.48Peptide transporter PTR2 OS=Arabidopsis thaliana G... [more]
PTR3A_ARATH4.269e-1328.57Peptide transporter PTR3-A OS=Arabidopsis thaliana... [more]
PTR2X_ARATH4.269e-1334.15Probable peptide transporter At1g52190 OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-G05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679947 ID=EY679947; Name=EY679947; organism=Citrus sinensis; type=EST; length=725bp
GCCGCAAGATCACACCCCTTGACAAATGATCCAACGGCCGAGATCCCGTT
AAGCGTGTTCTGGCTAGTGCCTCAATTTTTCTTGGTGGGTGCAGGAGAGG
CCTTCACTTACATAGGGCAGCTTGATTTTTTCCTAAGGGAGTGTCCAAAA
GGGATGAAGACCATGAGTACAGGATTGTTTTTGAGTACACTGTCACTAGG
ATTTTTCGTTAGCTCTTTATTGGTCTCTCTGGTGCACAAAGTGACAGGGG
TTAAGAAGCCATGGCTAGCAGACAATTTAAACCAAGGGAGGCTATATGAT
TTCTACTGGCTGTTGGCAATTTTGAGCGCTTTGAACTTTGTTATATACTT
GGCCTTTGCTAGATGGTATGTGTACAAGGATAAGAGGCTTGCAGAGGAGG
GAATTGAATTGGAGGAACCAGAGCCCGCCTGCCATTAACAAGGGTTGGTC
TCTTTCTGAATTTTGAAAATATGTATCGAGTACAAAGTCTTTTTGGGTTT
TAATAGTTTTGTAACCTTTACATGTTATAAAAAAAAAAGGAAAGGAGCAA
CTACTATTAAAAGGAAAAAAATGTTTCTTTGGTTTAGCTATACCCAACAA
TGTGTCTGTACTTCCATTTTAATTGTAAAAGAACAACCATTACCGTTTCC
AATAAAAAAAAAAAGAAAGGGGGGGCCCCTTCTAAAGATCCCAAGCCTAT
CTACGCATTGATGCAAACTTTTGCC
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