EY679946

Overview
NameEY679946
Unique NameEY679946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1005
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679946 vs. ExPASy Swiss-Prot
Match: Y2168_ARATH (Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana GN=At2g01680 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.563e-34
Identity = 69/112 (61.61%), Postives = 89/112 (79.46%), Query Frame = 2 
Query:   38 LKSFRFITHQSFFSAVRSGDLETIKNIIDNLTKDEAPDGSS---LVSELMAMQNDTGETALYISAANNFQDIFSCLLKFCDVEIVKIRSRSDMNTFHVAAKKGHLGIAKELV 364
            +K  +F+THQ+FFS+VRSGDL  ++ ++DNLT DE  D SS    V+ELM++QND GETA+YISAA N +DIF  L++F  +E VKIRS+SDMN FHVAAK+GHLGI KEL+
Sbjct:    3 MKQMKFLTHQAFFSSVRSGDLSQLQQLVDNLTGDELIDESSPCSAVAELMSVQNDAGETAVYISAAENLEDIFRYLIRFSSLETVKIRSKSDMNAFHVAAKRGHLGIVKELL 114

HSP 2 Score: 24.6386 bits (52), Expect = 7.563e-34
Identity = 17/47 (36.17%), Postives = 24/47 (51.06%), Query Frame = 1 
Query:  418 LYSAAVHNHLDVVITIFGC--*CRLHNNSLEKREKPRYHLARWYGLL 552
            LY+AAV +HL++V  +      C +    + K  K   H A  YGLL
Sbjct:  132 LYAAAVQDHLEIVNAMLDVDPSCAM---IVRKNGKTSLHTAGRYGLL 175
The following BLAST results are available for this feature:
BLAST of EY679946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2168_ARATH7.563e-3461.61Ankyrin repeat-containing protein At2g01680 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-G04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679946 ID=EY679946; Name=EY679946; organism=Citrus sinensis; type=EST; length=1005bp
ATTGGATTTCAGTTCTTCCCGTCTTCTGATGGATTCATTAAAGTCATTCA
GGTTCATTACCCACCAATCTTTTTTCTCTGCCGTTCGATCTGGGGACCTG
GAAACCATCAAGAATATTATTGATAATTTGACAAAGGATGAAGCTCCTGA
TGGTTCTTCTTTGGTATCTGAGCTAATGGCTATGCAGAATGATACAGGGG
AGACTGCCCTGTACATCTCCGCAGCTAATAATTTTCAGGATATTTTCAGT
TGCTTGCTTAAGTTTTGTGATGTTGAGATTGTCAAAATCAGGTCTCGGTC
TGATATGAACACGTTTCATGTTGCCGCTAAGAAAGGCCACTTGGGGATCG
CAAAGGAGCTTGTGAGCGATTTGGCCTGAGCTATGTAAGTCCTGTGACTC
CTCAAATACTAACCCTACTTTATTCGGCAGCTGTGCATAATCATTTGGAT
GTGGTGATTACCATCTTTGGATGCTGATGTCGTCTGCACAATAATAGTTT
AGAAAAAAGGGAAAAACCGCGCTACCATCTAGCTCGATGGTACGGTCTCC
TTAATAAAAGTGCACGCTCTTATATTCCCGGGCTCCCGAACTTTGTCACT
ATTAGACGACAAAAAAAGGTACGCTGGCACTCAATTAGGTCTGGATCGCG
TCTGGGTTCCTCCGTCGGGAAAAGATTCTTTTACTCGCTGAACCTTTTTT
CTAATATATCCAGCGGATACCTAAATGGCTCATTCGGTGCTTGCTTGTAC
ATCTTTCATGAGAATCAAGCGTCCCAACGGGGCTCCTTAATACGATGCTT
TATTATTTTTACTTACTGACATTTACACGCGCGCTGTAAAAAAAACCCTT
GCTTTCTGATTTGGCTTCTCTTTTACACTATCACTCACAAGTGGTTCTTT
ATCAAGTACATTTTTGTTAGTATCGGCCCGAACGAAATTGAGAATATATT
CAATTGTTAACTCTTCTGTCCTACCCCTACCGGTGTACGACGGTGCGCGC
GGTCT
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