EY679944

Overview
NameEY679944
Unique NameEY679944
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679944 vs. ExPASy Swiss-Prot
Match: SGAT_ARATH (Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana GN=AGT1 PE=1 SV=2)

HSP 1 Score: 398.282 bits (1022), Expect = 3.077e-110
Identity = 192/244 (78.69%), Postives = 216/244 (88.52%), Query Frame = 1
Query:    1 QFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDDYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRLLGKATRLAVEAWGLKNCTQKKKWFSDTVTAVIVPSQSII*KIVKKGWQKKPSKLKAG 732
            QFSLLWIDQQ+RLNFNVDVVESDWG+GA L VLASKL+ D  HTIKAICIVHNETATGVTN++S VR LLD Y+HPAL LVDGVSSICA+DFRMDEWG+DVALTGSQKALSLPTG+GIVCASPKALEA+KT+KS++VFFDW DY+KFY LGT+WPYTPSIQLLYGLRAALDLIFEEGLEN+I RH  LGKATRLAVEAWGLKNCTQK++W S+TVTAV+VP      +IV++ WQ+    L  G
Sbjct:   94 QFSLLWIDQQKRLNFNVDVVESDWGQGANLQVLASKLSQDENHTIKAICIVHNETATGVTNDISAVRTLLDHYKHPALLLVDGVSSICALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEATKTSKSLKVFFDWNDYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENIIARHARLGKATRLAVEAWGLKNCTQKEEWISNTVTAVMVPPHIDGSEIVRRAWQRYNLSLGLG 337          
BLAST of EY679944 vs. ExPASy Swiss-Prot
Match: SGAA_METEA (Serine--glyoxylate aminotransferase OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=sgaA PE=3 SV=2)

HSP 1 Score: 251.136 bits (640), Expect = 6.075e-66
Identity = 129/249 (51.81%), Postives = 165/249 (66.27%), Query Frame = 1
Query:    1 QFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDDYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEAS-----KTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRLLGKATRLAVEAWGLKNCTQKKKWFSDTVTAVIVPSQSII*KIVKKGWQKKPSKLKAG 732
            QFS LWID  QRL  +V V E +WG GAK + +   L AD  H IKA+ +VHNETATGVT+N+  VRK +D   HPAL  VDGVSSI ++ F+ DEW +D A+ GSQK L LP G+G++C S KAL+A+     +  +  RV+FDW+D  K  N   ++PYTP + LLYGLR AL  +FEEGLENV  RH +LG+ATR AV AWGLK C +  +W SDTVTA++ P      KI+K  + +    L AG
Sbjct:   94 QFSHLWIDMAQRLGLDVVVQEEEWGTGAKPEKIEEALRADKNHEIKAVMVVHNETATGVTSNIGAVRKAIDAAGHPALLFVDGVSSIGSLPFKADEWKVDCAIAGSQKGLMLPAGLGVICVSQKALKAAEGQSGRNDRLARVYFDWEDQ-KKQNPTGYFPYTPPLPLLYGLREALACLFEEGLENVYHRHAVLGEATRQAVAAWGLKTCAKSPEWNSDTVTAILAPEGVDAAKIIKHAYVRYNLALGAG 341          
BLAST of EY679944 vs. ExPASy Swiss-Prot
Match: SGAA_HYPME (Serine--glyoxylate aminotransferase OS=Hyphomicrobium methylovorum GN=sgaA PE=3 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 7.398e-63
Identity = 116/223 (52.02%), Postives = 157/223 (70.40%), Query Frame = 1
Query:    1 QFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDDYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALE--ASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRLLGKATRLAVEAWGLKNCTQKKKWFSDTVTAVIVP 663
            QFSLLW+D  +RL   V+V + +WG G  ++  A  LA D  H IKA+ + HNETATGV+++++ VRK LD  +HPAL +VDGVSS+ ++D RM EWG+D  ++GSQK   LPTG+GI+  S KAL+   SK  +  R FF ++D IK  + G F+PYTP+ QLL GLR +LDL+F EGL+NV  RH  L    R AV+AWGLK C ++ KW+SDTV+A++VP
Sbjct:   89 QFSLLWVDMCERLGLKVEVCDEEWGTGVPVEKYADILAKDKNHEIKAVFVTHNETATGVSSDVAGVRKALDAAKHPALLMVDGVSSVGSLDMRMGEWGVDCCVSGSQKGFMLPTGLGILAVSQKALDINKSKNGRMNRCFFSFEDMIKTNDQG-FFPYTPATQLLRGLRTSLDLLFAEGLDNVFARHTRLASGVRAAVDAWGLKLCAKEPKWYSDTVSAILVP 310          

HSP 2 Score: 24.6386 bits (52), Expect = 7.398e-63
Identity = 11/29 (37.93%), Postives = 17/29 (58.62%), Query Frame = 2
Query:  686 LLKRAGKKNHPSLRLGPYKIAGKILKTGH 772
            + K A  + + S  LG  K+AGK+ + GH
Sbjct:  318 ITKTAYYRYNTSFGLGLNKVAGKVFRIGH 346          
BLAST of EY679944 vs. ExPASy Swiss-Prot
Match: DHSS_ANACY (Soluble hydrogenase 42 kDa subunit OS=Anabaena cylindrica PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.972e-32
Identity = 82/221 (37.10%), Postives = 121/221 (54.75%), Query Frame = 1
Query:    1 QFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDDYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRLLGKATRLAVEAWGLKNCTQKKKWFSDTVTAVIVP 663
            +F   W++  Q    NV+ + ++WG+    D  A KL ADT   IKA+ I H+ET+TGV N+L  +   + ++   AL +VD V+S+ A +  +D  G+DV  +GSQK   +P G+G V  SPKA EA KTAK  + + D   Y K     T  P+TP + L+  L   L ++ +EGLE++  RH     ATR A++A  L       +  S  +TAV  P
Sbjct:   88 KFGERWVEVGQAFGLNVEAITAEWGQPLDPDKFAQKLQADTNKEIKAVIITHSETSTGVINDLVAINSHVKEHGQ-ALIIVDAVTSLGAYNVPVDALGLDVVASGSQKGYMIPPGLGFVSVSPKAWEAYKTAKLPKYYLDLGKYRKATAKNT-TPFTPPVNLMVALHTTLGMMKKEGLESIFTRHERQKNATRAAMKALNLP-LFAADECASPAITAVATP 305          
BLAST of EY679944 vs. ExPASy Swiss-Prot
Match: Y959_METJA (Uncharacterized aminotransferase MJ0959 OS=Methanocaldococcus jannaschii GN=MJ0959 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.720e-31
Identity = 80/203 (39.41%), Postives = 119/203 (58.62%), Query Frame = 1
Query:   58 VESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDDYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEA-SKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRLLGKATRLAVEAWGLKNCTQKKKWFSDTVTAVIVP 663
            ++ +WG+ A+ +  A K   D    IKA+ +VHNET+TG  N + ++ +++ DY   AL++VD VSS+      +D++ ID+ +TGSQK L+ P G+  +  S KA E   K    V  + D   Y K+Y      PYTPS+ L Y L  ALDL+ EEG+EN ++RH  L KATR  +EA G++    K++  S TVT+   P
Sbjct:  110 LDVEWGDMAEPE--AVKEILDKYDDIKAVTVVHNETSTGARNPIKEIGEVVKDY--DALYIVDTVSSLGGDYVNVDKFHIDICVTGSQKCLAAPPGLAAITVSEKAWEVIKKNDDKVGFYLDLLAYKKYYEEKKQTPYTPSVNLTYALNVALDLVLEEGIENRVKRHERLAKATRAGLEAMGIE-LFAKERARSVTVTSAKYP 307          
BLAST of EY679944 vs. ExPASy Swiss-Prot
Match: DHSS_SYNP1 (Soluble hydrogenase, small subunit OS=Synechococcus sp. (strain PCC 6716) PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.260e-27
Identity = 69/201 (34.33%), Postives = 109/201 (54.23%), Query Frame = 1
Query:    1 QFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDDYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRLLGKATRLAVEAWGL 603
            +F   W +         + + + WG+    D   + L        KA+ + H+ET+TGV N+L  + + +  +   AL +VD V+S+ A+   +DEWG+DV  +GSQK   +P G+  V  SPKA EA KTA   + + D   Y K     T  P+TP + L + L+ AL+++  EGLE + +RH+ L +ATR A++A  L
Sbjct:   88 KFGDRWGEVCDAYGLTTERISAPWGQPLNPDDFKAVLDGHRQKPSKAVIVTHSETSTGVINDLEAINRHVKAHGQ-ALIIVDAVTSLGAVSVPIDEWGLDVVGSGSQKGYMIPPGLAFVSVSPKAWEAYKTATLPKFYLDLGKYRKDAAKHT-TPFTPPVNLFFALKTALEMMQAEGLEAIFQRHQRLMQATRAAMKALNL 286          
BLAST of EY679944 vs. ExPASy Swiss-Prot
Match: PUCG_BACSU (Purine catabolism protein pucG OS=Bacillus subtilis GN=pucG PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.162e-16
Identity = 64/222 (28.83%), Postives = 106/222 (47.75%), Query Frame = 1
Query:    1 QFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDDYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMG----------IVCASPK-----ALEASKTAKS-----VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRLLGKATRLAVEAWGLK 606
            +F  L  +  +R   NV ++E +WG     + +  ++        K + +VH ET+TG  + L  + +        ALF+VD V++I   + ++DEW ID A+ G+QK LS+P+GM           ++ A  K     A +A + A S        +FD      +++      +T +  +LY LR  + L+ EEGLE   ERHR    A    ++A GL+
Sbjct:   96 RFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKP---KIVAMVHGETSTGRIHPLKAIGEACRT--EDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCLSVPSGMAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAMGLR 312          
BLAST of EY679944 vs. ExPASy Swiss-Prot
Match: SGAT_MAIZE (Serine--glyoxylate aminotransferase (Fragments) OS=Zea mays PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.766e-16
Identity = 58/143 (40.56%), Postives = 67/143 (46.85%), Query Frame = 1
Query:  187 LSKVRKLLDDYRHPA--LFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRLLGKATRLAVEAWGLKN 609
            L  V+K L +   P   L LVD           MDEWG+DVALTGSQKALS PTGMG+VCASP            RVFFDWKDY++     T+W Y  ++ L                               LAVEAWGL N
Sbjct:   25 LEDVKKALTNTLSPGDRLLLVD-----------MDEWGVDVALTGSQKALSFPTGMGLVCASP------------RVFFDWKDYLR-----TYWHYDQALDL------------------------------ELAVEAWGLSN 109          
BLAST of EY679944 vs. ExPASy Swiss-Prot
Match: AGX1_YEAST (Alanine--glyoxylate aminotransferase 1 OS=Saccharomyces cerevisiae GN=AGX1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.766e-16
Identity = 64/195 (32.82%), Postives = 94/195 (48.21%), Query Frame = 1
Query:    4 FSLLWIDQQQRLNFNVDVVES-DWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDDYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPK----ALEASKTAKSVRVFFD----WKDYIKFYNLGT-FWPYTPSIQLLYGLRAALDLIFEEGLENVIERHR 558
            FS  + D  +     VDVV     GE   L+++  KL+ ++     A+ + H +T+T V ++L  + + +        F+VD V SI   +F  DEWG+D ALT SQKA+  P G+ I   S +    AL  SK    V  +F     W   ++ Y  G   +  TP +QL+  L  AL  I EEGL    + HR
Sbjct:   97 FSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNS---YGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNG-HVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHR 287          
BLAST of EY679944 vs. ExPASy Swiss-Prot
Match: SPYA_PONAB (Serine--pyruvate aminotransferase OS=Pongo abelii GN=AGXT PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.835e-16
Identity = 69/221 (31.22%), Postives = 102/221 (46.15%), Query Frame = 1
Query:   19 IDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDDYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEA--SKTAKSVRVFFDWKDYIKFYNLG---TFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRLLGKATRLAVEAWGLKNCTQKKKWFSDTVTAVIVPS 666
            +D  +R+   V  +  D G    L  +   LA    H    + + H E++TGV   L    +L   +R+  L LVD V S+      MD+ GID+  +GSQKAL+ P G  ++  S KA +   S+  K    + D K    F+        + +T  I  LY LR +L LI E+GLEN   +HR         ++A GL+   +       TVT V VP+
Sbjct:  113 VDIGERMGARVHPMTKDPGGHYTLQEVEEGLAQ---HKPVLLFLTHGESSTGVLQPLDGFGELC--HRYKCLLLVDSVVSVGGTPVYMDQQGIDILYSGSQKALNAPPGTSLISFSDKAKKKMYSRKTKPFSFYLDIKWLANFWGCDDQPRMYHHTIPIISLYSLRESLALIAEQGLENSWRKHREAAAYLHGRLQALGLQLFVKDPALRLPTVTTVAVPA 328          
The following BLAST results are available for this feature:
BLAST of EY679944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
SGAT_ARATH3.077e-11078.69Serine--glyoxylate aminotransferase OS=Arabidopsis... [more]
SGAA_METEA6.075e-6651.81Serine--glyoxylate aminotransferase OS=Methylobact... [more]
SGAA_HYPME7.398e-6352.02Serine--glyoxylate aminotransferase OS=Hyphomicrob... [more]
DHSS_ANACY1.972e-3237.10Soluble hydrogenase 42 kDa subunit OS=Anabaena cyl... [more]
Y959_METJA3.720e-3139.41Uncharacterized aminotransferase MJ0959 OS=Methano... [more]
DHSS_SYNP17.260e-2734.33Soluble hydrogenase, small subunit OS=Synechococcu... [more]
PUCG_BACSU1.162e-1628.83Purine catabolism protein pucG OS=Bacillus subtili... [more]
SGAT_MAIZE5.766e-1640.56Serine--glyoxylate aminotransferase (Fragments) OS... [more]
AGX1_YEAST5.766e-1632.82Alanine--glyoxylate aminotransferase 1 OS=Saccharo... [more]
SPYA_PONAB9.835e-1631.22Serine--pyruvate aminotransferase OS=Pongo abelii ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-G02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679944 ID=EY679944; Name=EY679944; organism=Citrus sinensis; type=EST; length=887bp
CAATTCAGTTTGCTTTGGATTGATCAGCAGCAGCGCCTCAACTTCAACGT
TGATGTCGTCGAAAGTGACTGGGGTGAAGGTGCAAAGCTTGATGTTTTGG
CATCAAAACTTGCAGCAGATACTGCACACACTATCAAGGCCATTTGCATT
GTTCATAACGAGACAGCGACCGGAGTTACCAACAACTTGTCTAAAGTGAG
AAAACTTCTTGATGATTACAGGCACCCGGCTCTTTTTCTCGTTGACGGGG
TTTCCTCCATTTGTGCCATCGATTTCCGTATGGATGAATGGGGCATAGAT
GTGGCTCTAACTGGCTCTCAGAAAGCTCTTTCACTTCCTACTGGAATGGG
GATTGTTTGTGCAAGCCCCAAAGCTCTAGAGGCATCCAAAACTGCAAAAT
CTGTCAGAGTTTTCTTTGATTGGAAAGACTACATAAAGTTTTACAATTTG
GGAACATTTTGGCCATATACCCCTTCCATCCAACTGCTGTATGGGCTGCG
AGCAGCTTTGGATCTGATTTTTGAGGAAGGACTTGAAAATGTGATCGAAA
GGCACCGTCTTTTGGGCAAAGCAACCAGGCTTGCTGTGGAGGCATGGGGA
TTAAAGAACTGCACCCAAAAAAAAAAATGGTTCAGTGACACCGTGACTGC
TGTGATTGTTCCTTCACAATCAATAATTTAAAAAATTGTTAAAAAGGGCT
GGCAAAAAAAACCATCCAAGCTTAAGGCTGGGCCCTTACAAAATTGCTGG
GAAAATATTAAAAACCGGGCATCCCCCGCCCCCCTAAAATAAATTTGCAA
TTGGTGGGGCTGTTCCCCCTGGGGTGAAAAAAAAAAACTAAAAAAACTTG
GGGCTACCCCGGTTAAACCGGGGGAAACGGGGGGGTT
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