EY679942
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY679942 vs. ExPASy Swiss-Prot
Match: TSSC1_DANRE (Protein TSSC1 OS=Danio rerio GN=tssc1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.488e-22 Identity = 57/171 (33.33%), Postives = 97/171 (56.73%), Query Frame = 3 Query: 6 LELIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILVS 491 LEL+ LD AH G + CVLW G +++S+ E ++ LW L S+ A + S + G L + + G W PH + +A +++++ WDLRSM + IE+AH VR++D++ K++ L + D+ + WD+R + P++ L H+HW W+V N +D +L + Sbjct: 123 LELLCHLDNSAH-GSMACVLWEPMGDGKRVISLAENHVLLWDLQESSAKATISSSATLEGKGQLKF-TAGKWSPHHNCTQLATANDTAIRGWDLRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDVRHISEPVKCLEEHSHWVWSVRYNHSHDQLLLTA 291
BLAST of EY679942 vs. ExPASy Swiss-Prot
Match: TSSC1_RAT (Protein TSSC1 OS=Rattus norvegicus GN=Tssc1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.645e-22 Identity = 56/168 (33.33%), Postives = 92/168 (54.76%), Query Frame = 3 Query: 6 LELIAALDAHV-GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFIL 485 LEL+ LD G + CV+W G K++S+ + +I LW L S+ A + S + G L + SG W PH + VA +++++ WD RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W+V N +D +L Sbjct: 123 LELLCHLDNGAQGNVACVVWEPMGDGKKVISLADSHILLWDLQPSSSQAVLASSAALEGRGQLKFTSG-RWSPHHNCTQVATASDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWSVRYNHSHDQLVL 289
BLAST of EY679942 vs. ExPASy Swiss-Prot
Match: TSSC1_MOUSE (Protein TSSC1 OS=Mus musculus GN=Tssc1 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.260e-21 Identity = 55/168 (32.74%), Postives = 92/168 (54.76%), Query Frame = 3 Query: 6 LELIAALDAHV-GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFIL 485 LEL+ LD G + CV+W G K++S+ + +I LW L S+ A + S + G L + + G W PH + VA +++++ WD RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W+V N +D +L Sbjct: 123 LELLCHLDNSAQGNVACVVWEPMGDGKKVISLADSHILLWDLQPSSSQAVLASSATLEGRGQLKF-TAGRWSPHHNCTQVATASDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWSVRYNHSHDQLVL 289
BLAST of EY679942 vs. ExPASy Swiss-Prot
Match: TSSC1_PONAB (Protein TSSC1 OS=Pongo abelii GN=TSSC1 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.645e-21 Identity = 59/169 (34.91%), Postives = 93/169 (55.03%), Query Frame = 3 Query: 6 LELIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS---SGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFIL 485 LEL+ LD AH G + CV+W G K++S+ + +I LW L S+ A + S S G L + SG W PH + VA +++++ WD RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W V N +D +L Sbjct: 150 LELLCHLDNTAH-GNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLEGKGQLKFTSG-RWSPHHNCTQVATANDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWNVRYNHSHDQLVL 316
BLAST of EY679942 vs. ExPASy Swiss-Prot
Match: TSSC1_HUMAN (Protein TSSC1 OS=Homo sapiens GN=TSSC1 PE=1 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.645e-21 Identity = 59/169 (34.91%), Postives = 93/169 (55.03%), Query Frame = 3 Query: 6 LELIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS---SGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFIL 485 LEL+ LD AH G + CV+W G K++S+ + +I LW L S+ A + S S G L + SG W PH + VA +++++ WD RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W V N +D +L Sbjct: 123 LELLCHLDNTAH-GNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLEGKGQLKFTSG-RWSPHHNCTQVATANDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWNVRYNHSHDQLVL 289
BLAST of EY679942 vs. ExPASy Swiss-Prot
Match: TSSC1_XENTR (Protein TSSC1 OS=Xenopus tropicalis GN=tssc1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.165e-21 Identity = 56/169 (33.14%), Postives = 93/169 (55.03%), Query Frame = 3 Query: 6 LELIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFIL 485 LEL+ LD AH G + CV W G KL+S+ + + +W L S+ + + S + G L + SG W PH + VA +++++ WD+RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W+V N +D +L Sbjct: 123 LELLCHLDNTAH-GNMACVTWEPLGDGKKLLSLADNYLMIWDLQESSTKSVLSSSVTLEGKGQLRFTSG-KWSPHHNCTQVATANDTAIRGWDIRSMRQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNIHEPVKTLEEHSHWVWSVRYNHSHDQLVL 289
BLAST of EY679942 vs. ExPASy Swiss-Prot
Match: TSSC1_XENLA (Protein TSSC1 OS=Xenopus laevis GN=tssc1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.165e-21 Identity = 54/168 (32.14%), Postives = 92/168 (54.76%), Query Frame = 3 Query: 6 LELIAALDAHV-GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFIL 485 LEL+ LD+ G + CV W G KL+S+ + + +W L S+ + + S + G L + SG W PH + VA +++++ WD+RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W+V N +D +L Sbjct: 123 LELLCHLDSTAHGNMACVTWEPLGDGKKLLSLADNYLLIWDLQESSTKSVLSSSATLEGKGQLRFTSG-KWSPHHNCTQVATANDTAIRGWDIRSMRQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNIHEPVKTLEEHSHWVWSVRYNHSHDQLVL 289
BLAST of EY679942 vs. ExPASy Swiss-Prot
Match: TSSC1_MACFA (Protein TSSC1 OS=Macaca fascicularis GN=TSSC1 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.819e-20 Identity = 57/169 (33.73%), Postives = 92/169 (54.44%), Query Frame = 3 Query: 6 LELIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS---SGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFIL 485 LEL+ LD AH + CV+W G K++S+ + +I LW L S+ A + S S G L + SG W PH + VA +++++ WD R+M + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W V N +D +L Sbjct: 123 LELLCHLDNTAH-SNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLGGKGQLKFTSG-RWSPHHNCTQVATANDTTLRGWDTRTMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWNVRYNHSHDQLVL 289
BLAST of EY679942 vs. ExPASy Swiss-Prot
Match: TSSC1_GECJA (Protein TSSC1 OS=Gecko japonicus GN=TSSC1 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.103e-20 Identity = 56/171 (32.75%), Postives = 93/171 (54.39%), Query Frame = 3 Query: 6 LELIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILVS 491 LEL+ LD AH G + VLW G KL+S+ + ++ LW L S+ A + + + G L + SG W PH + VA +++++ WD+R+M + IE AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W V N +D +L + Sbjct: 123 LELLCHLDNTAH-GNMAGVLWEPMGDGKKLISLADNHLLLWDLQESSSKAVLSNSAALEGKGQLKFTSG-RWSPHHNCTQVATANDTAIRGWDIRTMSQIYCIESAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVSDPVKTLEEHSHWVWNVRYNHSHDQLVLTA 291
BLAST of EY679942 vs. ExPASy Swiss-Prot
Match: TSSC1_DICDI (Protein tssc1 homolog OS=Dictyostelium discoideum GN=tssc1 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.431e-19 Identity = 52/165 (31.52%), Postives = 92/165 (55.76%), Query Frame = 3 Query: 6 LELIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILVS 491 +E + L H G I +L SG ++ ++S+D+ NI LWS ++N KQ G L LS G+ +P+ N +A + +++ WD R+ +T S++ AH +R++D++ K + L++A D+ + +WD R + P++ GH HW W+ N +D I+ S Sbjct: 130 IEELFELKGHTGIIKPILCDPSGSNNFIISLDDSNIRLWS-KIDDQNEPTVIKQF-GNLSKLSVGSINPNISNQLATANDVNIKGWDFRNAKETFSMDKAHSEQIRDIDFNPNKPYYLLSAGDDCKLKIWDTRQTRDPVKIFSGHNHWIWSAKFNRYHDQLIITS 292 The following BLAST results are available for this feature:
BLAST of EY679942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY679942 ID=EY679942; Name=EY679942; organism=Citrus sinensis; type=EST; length=915bpback to top |