EY679939
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679939 vs. ExPASy Swiss-Prot
Match: GLYM_SOLTU (Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 2.070e-68 Identity = 118/128 (92.19%), Postives = 123/128 (96.09%), Query Frame = 1 Query: 124 DKPTRPLFNGSSLYYMSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWG 507 DKP + L+NG SLYYMSSLPNEAVY+KEK+GV WPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LCQKRALEAFRLDP KWG Sbjct: 15 DKPVKSLYNGGSLYYMSSLPNEAVYDKEKSGVAWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWG 142 HSP 2 Score: 31.9574 bits (71), Expect = 2.070e-68 Identity = 21/44 (47.73%), Postives = 24/44 (54.55%), Query Frame = 3 Query: 621 LSGFPSNFSVYTCIC*NLMKGSWAFDLPPGGASLHTANQTKTKK 752 LSG P+NF VYT + + A DLP GG H QT TKK Sbjct: 148 LSGSPANFQVYTALL-KPHERIMALDLPHGGHLSH-GYQTDTKK 189
BLAST of EY679939 vs. ExPASy Swiss-Prot
Match: GLYM_FLAPR (Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 1.012e-64 Identity = 115/128 (89.84%), Postives = 120/128 (93.75%), Query Frame = 1 Query: 124 DKPTRPLFNGSSLYYMSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWG 507 DKP + LFNG LY MSSLP+EAVYEKE+ GVTWPKQLNAPLEVVDPEIADIIE EKARQWKGLELIPSENFTS+SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LCQKRALEAFRLDP KWG Sbjct: 15 DKPLQRLFNGGHLYSMSSLPSEAVYEKERPGVTWPKQLNAPLEVVDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWG 142 HSP 2 Score: 31.5722 bits (70), Expect = 1.012e-64 Identity = 21/44 (47.73%), Postives = 23/44 (52.27%), Query Frame = 3 Query: 621 LSGFPSNFSVYTCIC*NLMKGSWAFDLPPGGASLHTANQTKTKK 752 LSG P+NF VYT + A DLP GG H QT TKK Sbjct: 148 LSGSPANFHVYTALL-KAHDRIMALDLPHGGHLSH-GYQTDTKK 189
BLAST of EY679939 vs. ExPASy Swiss-Prot
Match: GLYM_PEA (Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.444e-63 Identity = 111/128 (86.72%), Postives = 120/128 (93.75%), Query Frame = 1 Query: 124 DKPTRPLFNGSSLYYMSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWG 507 +K +RPLF+ SSLYY SSLP+EAVY+KE VTWPKQLN+PLEV+DPEIADIIE EKARQWKGLELIPSENFTS+SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LCQKRALEAFRLDP KWG Sbjct: 15 NKSSRPLFSASSLYYKSSLPDEAVYDKENPRVTWPKQLNSPLEVIDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWG 142 HSP 2 Score: 32.3426 bits (72), Expect = 2.444e-63 Identity = 22/44 (50.00%), Postives = 23/44 (52.27%), Query Frame = 3 Query: 621 LSGFPSNFSVYTCIC*NLMKGSWAFDLPPGGASLHTANQTKTKK 752 LSG PSNF VYT + A DLP GG H QT TKK Sbjct: 148 LSGSPSNFQVYTALL-KPHDRIMALDLPHGGHLSH-GYQTDTKK 189
BLAST of EY679939 vs. ExPASy Swiss-Prot
Match: GLYM_ARATH (Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis thaliana GN=SHM1 PE=1 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 5.419e-63 Identity = 114/128 (89.06%), Postives = 119/128 (92.97%), Query Frame = 1 Query: 124 DKPTRPLFNGSSLYYMSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWG 507 DKP RPL +S Y MSSLP+EAV EKE++ VTWPKQLNAPLE VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LCQKRALEAFRLDPEKWG Sbjct: 15 DKPIRPLIRSTSCY-MSSLPSEAVDEKERSRVTWPKQLNAPLEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPEKWG 141 HSP 2 Score: 31.5722 bits (70), Expect = 5.419e-63 Identity = 21/44 (47.73%), Postives = 24/44 (54.55%), Query Frame = 3 Query: 621 LSGFPSNFSVYTCIC*NLMKGSWAFDLPPGGASLHTANQTKTKK 752 LSG P+NF VYT + + A DLP GG H QT TKK Sbjct: 147 LSGSPANFHVYTALL-KPHERIMALDLPHGGHLSH-GYQTDTKK 188
BLAST of EY679939 vs. ExPASy Swiss-Prot
Match: GLYN_FLAPR (Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 2.901e-61 Identity = 111/128 (86.72%), Postives = 117/128 (91.41%), Query Frame = 1 Query: 124 DKPTRPLFNGSSLYYMSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWG 507 +KP + LFNG LY MSSLP+EAVYEKE+ GVTWPKQLNAPLEV DPEIADIIE EKARQWKGLELI SENFTS+SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE+LCQKRALEAFRLD KWG Sbjct: 15 NKPLQRLFNGGHLYSMSSLPSEAVYEKERPGVTWPKQLNAPLEVGDPEIADIIELEKARQWKGLELILSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDAAKWG 142 HSP 2 Score: 31.5722 bits (70), Expect = 2.901e-61 Identity = 21/44 (47.73%), Postives = 23/44 (52.27%), Query Frame = 3 Query: 621 LSGFPSNFSVYTCIC*NLMKGSWAFDLPPGGASLHTANQTKTKK 752 LSG P+NF VYT + A DLP GG H QT TKK Sbjct: 148 LSGSPANFHVYTALL-KAHDRIMALDLPHGGHLSH-GYQTDTKK 189
BLAST of EY679939 vs. ExPASy Swiss-Prot
Match: GLYC_CAEEL (Serine hydroxymethyltransferase OS=Caenorhabditis elegans GN=mel-32 PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.649e-32 Identity = 63/87 (72.41%), Postives = 72/87 (82.76%), Query Frame = 1 Query: 247 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWG 507 +E VDPE+ DI+++EK RQ +GLELI SENFTS +VM A+GS M NKYSEGYPGARYYGGNE+ID E LCQKRALE F LDP KWG Sbjct: 52 VEKVDPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGGNEFIDQMELLCQKRALEVFGLDPAKWG 138 HSP 2 Score: 28.1054 bits (61), Expect = 1.649e-32 Identity = 16/35 (45.71%), Postives = 20/35 (57.14%), Query Frame = 3 Query: 621 LSGFPSNFSVYTCIC*NLMKGSWAFDLPPGGASLH 725 LSG P+NF+VYT I + + DLP GG H Sbjct: 144 LSGSPANFAVYTAIVGSNGR-IMGLDLPDGGHLTH 177
BLAST of EY679939 vs. ExPASy Swiss-Prot
Match: GLYC_CAEBR (Serine hydroxymethyltransferase OS=Caenorhabditis briggsae GN=mel-32 PE=3 SV=3) HSP 1 Score: 131.724 bits (330), Expect = 8.040e-32 Identity = 61/87 (70.11%), Postives = 73/87 (83.91%), Query Frame = 1 Query: 247 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWG 507 +E +DPE+ +I+++EK+RQ +GLELI SENFTS +VM A+GS M NKYSEGYPGARYYGGNE+ID E LCQKRALE F LDP KWG Sbjct: 56 VEKIDPEVFNIMKNEKSRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGGNEFIDQMEILCQKRALEVFGLDPAKWG 142 HSP 2 Score: 27.335 bits (59), Expect = 8.040e-32 Identity = 15/35 (42.86%), Postives = 18/35 (51.43%), Query Frame = 3 Query: 621 LSGFPSNFSVYTCIC*NLMKGSWAFDLPPGGASLH 725 LSG P+NF+VYT + DLP GG H Sbjct: 148 LSGSPANFAVYTALV-GANGRIMGLDLPDGGHLTH 181
BLAST of EY679939 vs. ExPASy Swiss-Prot
Match: GLYC_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=shm2 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.834e-29 Identity = 63/93 (67.74%), Postives = 72/93 (77.42%), Query Frame = 1 Query: 229 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWG 507 K L APL DP + I+E EK+RQ + + LI SENFTS +VM A+GS+M NKYSEGYPGARYYGGNE+ID AE LCQ RALEAF LD EKWG Sbjct: 12 KLLKAPLAECDPTVYKILESEKSRQKESIALIASENFTSRAVMDALGSIMQNKYSEGYPGARYYGGNEFIDQAERLCQTRALEAFHLDGEKWG 104
BLAST of EY679939 vs. ExPASy Swiss-Prot
Match: GLYM_ASHGO (Serine hydroxymethyltransferase, mitochondrial OS=Ashbya gossypii GN=SHM1 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 4.087e-29 Identity = 60/91 (65.93%), Postives = 73/91 (80.22%), Query Frame = 1 Query: 235 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWG 507 L+ ++ DPE+ DI+ E++RQ + + LIPSENFTSV+VM +GS M NKYSEGYPG RYYGGN+YIDMAESLCQKRALE + LDP KWG Sbjct: 36 LSQHVQEFDPEMYDILTKERSRQKRSITLIPSENFTSVAVMNLLGSEMQNKYSEGYPGQRYYGGNQYIDMAESLCQKRALELYGLDPAKWG 126
BLAST of EY679939 vs. ExPASy Swiss-Prot
Match: GLYC1_DICDI (Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum GN=shmt1 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.189e-28 Identity = 60/90 (66.67%), Postives = 73/90 (81.11%), Query Frame = 1 Query: 238 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWG 507 N PL+ VD EI +++ EK RQ+KGLELI SENFTS +VM+A+GS TNKY+EGYPG+RYYGG E +D E+LCQKRAL+AFRLD KWG Sbjct: 7 NTPLKEVDNEIFELMNREKDRQFKGLELIASENFTSRAVMEALGSHFTNKYAEGYPGSRYYGGTEVVDELETLCQKRALKAFRLDESKWG 96 The following BLAST results are available for this feature:
BLAST of EY679939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY679939 ID=EY679939; Name=EY679939; organism=Citrus sinensis; type=EST; length=984bpback to top |