EY679936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679936 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 322.013 bits (824), Expect = 3.165e-87 Identity = 174/252 (69.05%), Postives = 193/252 (76.59%), Query Frame = 3 Query: 75 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGTVEGLQNLLEGRSVN*LDPLYPGWQPLNPLGLG*ITRRLFAELKVKGNQKRKGWQCSPCFGFFR*ALGPPAREPLKKLWPKHFGKTLSNKIAW 824 F GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMG VEG + + G +DPLYPG +PLGL FAELKVK K FGFF A+ + PL+ L H ++N AW Sbjct: 13 FAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR-VAGGPLGEVVDPLYPGGS-FDPLGLA-EDPEAFAELKVK-EIKNGRLAMFSMFGFFVQAI-VTGKGPLENL-ADHLADPVNNN-AW 257
BLAST of EY679936 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 321.627 bits (823), Expect = 4.133e-87 Identity = 174/252 (69.05%), Postives = 193/252 (76.59%), Query Frame = 3 Query: 75 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGTVEGLQNLLEGRSVN*LDPLYPGWQPLNPLGLG*ITRRLFAELKVKGNQKRKGWQCSPCFGFFR*ALGPPAREPLKKLWPKHFGKTLSNKIAW 824 F GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMG VEG + + G +DPLYPG +PLGL FAELKVK K FGFF A+ + PL+ L H ++N AW Sbjct: 12 FAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR-VAGGPLGEVVDPLYPGGS-FDPLGLA-EDPEAFAELKVK-EIKNGRLAMFSMFGFFVQAI-VTGKGPLENL-ADHLADPVNNN-AW 256
BLAST of EY679936 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 7.050e-87 Identity = 173/252 (68.65%), Postives = 192/252 (76.19%), Query Frame = 3 Query: 75 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGTVEGLQNLLEGRSVN*LDPLYPGWQPLNPLGLG*ITRRLFAELKVKGNQKRKGWQCSPCFGFFR*ALGPPAREPLKKLWPKHFGKTLSNKIAW 824 F GKAV L+PS +E++ GR++MRKT +K+ SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMG VEG + + G +DPLYPG +PLGL FAELKVK K FGFF A+ + PL+ L H ++N AW Sbjct: 13 FAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR-IAGGPLGEVVDPLYPGGS-FDPLGLA-DDPEAFAELKVK-EIKNGRLAMFSMFGFFVQAI-VTGKGPLENL-ADHLADPVNNN-AW 257
BLAST of EY679936 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 1.571e-86 Identity = 172/250 (68.80%), Postives = 189/250 (75.60%), Query Frame = 3 Query: 75 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGTVEGLQNLLEGRSVN*LDPLYPGWQPLNPLGLG*ITRRLFAELKVKGNQKRKGWQCSPCFGFFR*ALGPPAREPLKKLWPKHFGKTLSNKIAW 824 F G+AV L+PS +E+S GRI+MRK +KS S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMG VEG + + G +DPLYPG +PLGL FAELKVK K FGFF A+ + PL+ L H ++N AW Sbjct: 13 FAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR-IAGGPLGEVVDPLYPGGS-FDPLGLA-EDPEAFAELKVK-EIKNGRLAMFSMFGFFVQAI-VTGKGPLENL-ADHLADPVNNN-AW 255
BLAST of EY679936 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 1.571e-86 Identity = 174/252 (69.05%), Postives = 192/252 (76.19%), Query Frame = 3 Query: 75 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGTVEGLQNLLEGRSVN*LDPLYPGWQPLNPLGLG*ITRRLFAELKVKGNQKRKGWQCSPCFGFFR*ALGPPAREPLKKLWPKHFGKTLSNKIAW 824 F GKAV L+PS +E++ G+++MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMG VEG + E +DPLYPG +PLGL FAELKVK K FGFF AL + PL+ L H ++N AW Sbjct: 12 FAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLG-EVVDPLYPGGS-FDPLGLA-EDPEAFAELKVK-EIKNGRLAMFSMFGFFVQAL-VTGKGPLENL-ADHLADPVNNN-AW 256
BLAST of EY679936 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 1.571e-86 Identity = 171/250 (68.40%), Postives = 190/250 (76.00%), Query Frame = 3 Query: 75 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGTVEGLQNLLEGRSVN*LDPLYPGWQPLNPLGLG*ITRRLFAELKVKGNQKRKGWQCSPCFGFFR*ALGPPAREPLKKLWPKHFGKTLSNKIAW 824 F G+AV L+PS E++ GR+SMRKT +K V+S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMG VEG + + G +DPLYPG +PLGL FAELKVK K FGFF A+ + PL+ L H ++N AW Sbjct: 13 FAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR-VAGGPLGEVVDPLYPGGS-FDPLGLA-EDPEAFAELKVK-EIKNGRLAMFSMFGFFVQAI-VTGKGPLENL-ADHLADPVNNN-AW 255
BLAST of EY679936 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 2.679e-86 Identity = 172/252 (68.25%), Postives = 194/252 (76.98%), Query Frame = 3 Query: 75 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGTVEGLQNLLEGRSVN*LDPLYPGWQPLNPLGLG*ITRRLFAELKVKGNQKRKGWQCSPCFGFFR*ALGPPAREPLKKLWPKHFGKTLSNKIAW 824 F GKAV L+PS +E++ G+++MRKT +K+ +SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMG VEG + + G +DPLYPG +PLGL FAELKVK + K FGFF A+ + PL+ L H ++N AW Sbjct: 13 FAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR-VAGGPLGEVVDPLYPGGS-FDPLGLA-EDPEAFAELKVK-HIKNGRLAMFSMFGFFVQAI-VTGKGPLENL-ADHLADPVNNN-AW 257
BLAST of EY679936 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 2.962e-85 Identity = 169/248 (68.15%), Postives = 187/248 (75.40%), Query Frame = 3 Query: 81 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGTVEGLQNLLEGRSVN*LDPLYPGWQPLNPLGLG*ITRRLFAELKVKGNQKRKGWQCSPCFGFFR*ALGPPAREPLKKLWPKHFGKTLSNKIAW 824 G+AV L+P+ E+ + +MRKT SKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMG VEG + + G DP+YPG +PLGL FAELKVK K FGFF A+ + PL+ L H ++N AW Sbjct: 5 GQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR-IAGGPLGEVTDPIYPGGS-FDPLGLA-DDPEAFAELKVK-ELKNGRLAMFSMFGFFVQAI-VTGKGPLENL-ADHLADPVNNN-AW 245
BLAST of EY679936 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 8.618e-85 Identity = 173/263 (65.78%), Postives = 195/263 (74.14%), Query Frame = 3 Query: 75 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGTVEGLQNLLEGRSVN*LDPLYPGWQPLNPLGLG*ITRRLFAELKVKGNQKRKGWQCSPCFGFFR*ALGPPAREPLKKLWPKHFGKTLSNKIAWGQTPPTFGPRK 857 F GK V L+PS +E++ G+ +MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFGEAVW KAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMG VEG + + G +DPLYPG +PLGL FAELKVK + + S FGFF A+ + PL+ L H ++N AW F PRK Sbjct: 13 FAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYR-VAGGPLGVVVDPLYPGGS-FDPLGLA-EDPEAFAELKVKETKNGRLAMFS-MFGFFIQAI-VTGKGPLENL-ADHLVDPVNNN-AWSYA-TNFVPRK 267
BLAST of EY679936 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 1.126e-84 Identity = 171/252 (67.86%), Postives = 190/252 (75.40%), Query Frame = 3 Query: 75 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGTVEGLQNLLEGRSVN*LDPLYPGWQPLNPLGLG*ITRRLFAELKVKGNQKRKGWQCSPCFGFFR*ALGPPAREPLKKLWPKHFGKTLSNKIAW 824 F GKAV +PS +E++ G+ +MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMG VEG + + G +DPLYPG +PLGL FAELKVK K FGFF A+ + PL+ L H ++N AW Sbjct: 13 FAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR-VAGGPLGEVVDPLYPGGS-FDPLGLA-DDPEAFAELKVK-EIKNGRLAMFSMFGFFVQAI-VTGKGPLENL-ADHLADPVNNN-AW 257 The following BLAST results are available for this feature:
BLAST of EY679936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679936 ID=EY679936; Name=EY679936; organism=Citrus sinensis; type=EST; length=964bpback to top |