EY679934

Overview
NameEY679934
Unique NameEY679934
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length978
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2)

HSP 1 Score: 289.656 bits (740), Expect = 1.783e-77
Identity = 134/186 (72.04%), Postives = 157/186 (84.41%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSKGDIVFE 559
            ++   ++LFMALF SIA TGILEMQWG VGI DWWRNEQFWVIGG S+HLFAL QGLLK            SKAADDGEFSDLYLFKWTSLLIPP+TLL+ N+IGVI+GV+DAISNGY++WGPLFG+LFF+LWVI+ LYPFLKG LGKQDR+PTI++VW+ILLASI +LLW R+NPFV+KG  + E
Sbjct:  892 ISNYASILFMALFSSIAITGILEMQWGKVGIDDWWRNEQFWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSDLYLFKWTSLLIPPMTLLIINVIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIIVVWSILLASILTLLWVRVNPFVAKGGPILE 1077          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 8.851e-77
Identity = 132/186 (70.97%), Postives = 156/186 (83.87%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSKGDIVFE 559
            ++    +LFM +FISIA TGILEMQWGGVGI DWWRNEQFWVIGGASSHLFAL QGLLK            SKAADDG FS+LY+FKWT+LLIPP TLL+ N+IGVI+GV+DAISNGY++WGPLFG+LFF+LWVI+ LYPFLKG LGKQD++PTI++VW+ILLASI +LLW R+NPFV+KG  V E
Sbjct:  891 ISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGAFSELYIFKWTTLLIPPTTLLIINIIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIVHLYPFLKGMLGKQDKMPTIIVVWSILLASILTLLWVRVNPFVAKGGPVLE 1076          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2)

HSP 1 Score: 285.804 bits (730), Expect = 2.575e-76
Identity = 132/186 (70.97%), Postives = 155/186 (83.33%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSKGDIVFE 559
            ++   ++LFMALF SIA TGILEMQWG VGI DWWRNEQFWVIGG S+HLFAL QGLLK            SKAADDGEFS+LY+FKWTSLLIPP TLL+ N+IGVI+G++DAISNGY++WGPLFG+LFF+ WVIL LYPFLKG LGKQDR+PTI+LVW+ILLASI +LLW R+NPFV+KG  + E
Sbjct:  877 ISNYASILFMALFGSIAVTGILEMQWGKVGIDDWWRNEQFWVIGGVSAHLFALFQGLLKVLAGVETNFTVTSKAADDGEFSELYIFKWTSLLIPPTTLLIINVIGVIVGISDAISNGYDSWGPLFGRLFFAFWVILHLYPFLKGLLGKQDRMPTIILVWSILLASILTLLWVRVNPFVAKGGPILE 1062          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.847e-75
Identity = 129/186 (69.35%), Postives = 154/186 (82.80%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSKGDIVFE 559
            ++    +LF+ +F+SIA TGILEMQWG +GI DWWRNEQFWVIGG SSHLFAL QGLLK            SKAADDGEFS+LY+FKWTSLLIPP TLL+ N++GVI+GV+DAI+NGY++WGPLFG+LFF+LWVI+ LYPFLKG LGKQDR+PTI+LVW+ILLASI +LLW R+NPFVSK   V E
Sbjct:  895 ISNYAGILFLLMFMSIAVTGILEMQWGKIGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKAADDGEFSELYIFKWTSLLIPPTTLLIINIVGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGKQDRVPTIILVWSILLASILTLLWVRVNPFVSKDGPVLE 1080          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 6.144e-70
Identity = 123/182 (67.58%), Postives = 146/182 (80.22%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSKGD 547
            L  + +L FM+LFI I ATGILEM+W GVGI DWWRNEQFWVIGG SSHLFAL QGLLK            SK  DD EFS+LY FKWT+LLIPP TLL+ N IGV+ GV++AI+NGYE+WGPLFGKLFF+ WVI+ LYPFLKG +G+Q+R PTI++VW+ILLASIFSLLW RI+PF++K D
Sbjct:  900 LTNVASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVIAGIDTSFTVTSKGGDDEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKND 1081          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.369e-69
Identity = 122/182 (67.03%), Postives = 146/182 (80.22%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSKGD 547
            L  + +L FM+LFI I ATGILEM+W GVGI DWWRNEQFWVIGG SSHLFA+ QGLLK            SK  DD EFS+LY FKWT+LLIPP TLL+ N IGV+ GV++AI+NGYE+WGPLFGKLFF+ WVI+ LYPFLKG +G+Q+R PTI++VW+ILLASIFSLLW RI+PF++K D
Sbjct:  899 LTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSKGGDDEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKND 1080          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.369e-69
Identity = 122/182 (67.03%), Postives = 146/182 (80.22%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSKGD 547
            L  + +L FM+LFI I ATGILEM+W GVGI DWWRNEQFWVIGG SSHLFA+ QGLLK            SK  DD EFS+LY FKWT+LLIPP TLL+ N IGV+ GV++AI+NGYE+WGPLFGKLFF+ WVI+ LYPFLKG +G+Q+R PTI++VW+ILLASIFSLLW RI+PF++K D
Sbjct:  899 LTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSKGGDDEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKND 1080          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.581e-68
Identity = 120/182 (65.93%), Postives = 145/182 (79.67%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSKGD 547
            L  + +L FM+LFI I  TGILEM+W GV I DWWRNEQFWVIGG SSHLFA+ QGLLK            SKA DD EFS+LY FKWT+LLIPP TLL+ N IGV+ GV++AI+NGYE+WGPLFGKLFF+ WVI+ LYPFLKG +G+Q+R PTI++VW+ILLASIFSLLW RI+PF++K +
Sbjct:  899 LTNVASLWFMSLFICIFVTGILEMRWSGVAIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGVDTSFTVTSKAGDDEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNN 1080          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 2.185e-67
Identity = 111/180 (61.67%), Postives = 146/180 (81.11%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSK 541
            ++T  +L F++LF+SI  TGILE++W GV I +WWRNEQFWVIGG S+HLFA++QGLLK            SKA DD +F +LY FKWT+LLIPP T+L+ N++GV+ G++DAI+NGY++WGPLFGKLFFS WVI+ LYPFLKG +G+Q+R PTI+++W++LLASIFSLLW RI+PFV K
Sbjct:  834 ISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDDDFGELYAFKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLK 1013          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.416e-66
Identity = 116/182 (63.74%), Postives = 145/182 (79.67%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAA--DDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSK 541
            ++T  +L F+ALFISI ATGILEM+W GV I +WWRNEQFWVIGG S+HLFA++QGLLK            SKA   +D EF++LY FKWT+LLIPP TLL+ N+IGV+ GV+DAI+NG E WGPLFGKLFF+ WVI+ LYPFLKG +G+Q+R PTI+++W++LLASIFSLLW RI+PF  K
Sbjct:  861 ISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELYAFKWTTLLIPPTTLLILNIIGVVAGVSDAINNGSEAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFTIK 1042          
The following BLAST results are available for this feature:
BLAST of EY679934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
CESA6_ARATH1.783e-7772.04Cellulose synthase A catalytic subunit 6 [UDP-form... [more]
CESA2_ARATH8.851e-7770.97Cellulose synthase A catalytic subunit 2 [UDP-form... [more]
CESA5_ARATH2.575e-7670.97Cellulose synthase A catalytic subunit 5 [UDP-form... [more]
CESA9_ARATH2.847e-7569.35Probable cellulose synthase A catalytic subunit 9 ... [more]
CESA3_ORYSJ6.144e-7067.58Probable cellulose synthase A catalytic subunit 3 ... [more]
CESA5_ORYSJ1.369e-6967.03Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA5_ORYSI1.369e-6967.03Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA6_ORYSJ2.581e-6865.93Probable cellulose synthase A catalytic subunit 6 ... [more]
CESA7_ARATH2.185e-6761.67Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA9_ORYSJ2.416e-6663.74Cellulose synthase A catalytic subunit 9 [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-F04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679934 ID=EY679934; Name=EY679934; organism=Citrus sinensis; type=EST; length=978bp
ATTAGCAACTATGCCAGCTCTCCTTTTCATGGCGCTTTTCATATCCATAG
CTGCAACTGGCATTCTTGAAATGCAATGGGGAGGTGTTGGCATACATGAT
TGGTGGAGAAACGAGCAGTTCTGGGTGATTGGTGGTGCTTCATCACACCT
ATTTGCTCTTATCCAGGGTCTGCTTAAGGTCGTAGGGGGAGTTAACACAA
ACTTCACTGTTACTTCCAAAGCGGCAGATGACGGGGAATTTTCTGATCTT
TACCTATTTAAGTGGACGTCGTTGTTGATCCCTCCCTTGACTTTGTTAGT
CTTCAACCTAATTGGCGTCATAATAGGGGTTGCAGATGCTATCAGTAATG
GATACGAGACCTGGGGTCCACTCTTTGGTAAGCTGTTCTTTTCCTTGTGG
GTCATTCTCCAACTTTATCCATTCCTCAAGGGGTTCTTGGGGAAACAGGA
CAGGCTTCCCACAATCCTCTTGGTCTGGGCAATACTTTTAGCTTCAATTT
TCTCACTTTTATGGGCTCGAATCAATCCATTTGTGTCGAAAGGTGATATT
GTATTTGAAAGTTTGTGGGTTGGATTGCAACTGAGCTACACCAATATAGA
AAGTTTAGAAGTATCATGTTTCCATAAGAAGGTATTTTGGCAATTGGATT
AACCGGCGCAGGGTATATTGGCTAAAAAAAAAAATCTGTTACAACGCGGT
TGGTAGTACAGAAAAAATAGGGGGGTGGGTAAAAAAGAATAAACCCACCA
ATCGGGTATAACTACGGTACAGGTTGCTTTTAAAATCCAAAAGAACTAGA
ATTCAAGAAAATCTTAAATATTTTCGTCTTTCCTCCGCATATATTTCTCT
CACCCTTTTTTTTACCACTTAAATATTATGCACCATTAAAAGAAGGACTT
GAACAACCTTTGAGAACTAGTCTCTATTTTTTTCCCCTCACCCAGCCCCA
ACCATATTTGGGTGTTTTGTCTCGTTTT
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