EY679932

Overview
NameEY679932
Unique NameEY679932
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679932 vs. ExPASy Swiss-Prot
Match: K1468_XENTR (LisH domain and HEAT repeat-containing protein KIAA1468 homolog OS=Xenopus tropicalis PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.989e-15
Identity = 49/185 (26.49%), Postives = 95/185 (51.35%), Query Frame = 1
Query:   13 LWEMVVSSNIDMKINAANLLKVIVPYINAKVTSMQVLPALVTLGSDQNLNVKYASIDAFGAVAQHFKNDMIVDKIRVQMDAFLED----GSHEXXXXXXXXXXXXXPHTTERLR-DYLLSKIFQLSAVPSSSSDVMRRRERANAFCESIRALDATELSATSVRDFLLPAIQNLLKDADSLDPAHK 552
            LW  VV ++  ++  AA + +++V  +N  + + +V+PAL+TL SD  ++V+ A++ AFG + +      +++++++Q+ +FLED      H              P+   R R D++L  + +LS V +  S   +R + A    E+  AL    +S   + +  LP ++ L  D + L P H+
Sbjct:  949 LWYGVVHTSALVRCTAARMFELLVKGVNETLVAQRVVPALITLSSDPEISVRIATVPAFGTIMETVTQRELLERVKMQLASFLEDPQYQDQHSLQTEIIRTFGRVGPNAEPRFRDDFVLPHLHKLSFVNNQQSVDSKRLDIATHLFEAYSALSCCFISEELMMNHFLPGLRCLRTDMEQLSPEHE 1133          
BLAST of EY679932 vs. ExPASy Swiss-Prot
Match: K1468_DANRE (LisH domain and HEAT repeat-containing protein KIAA1468 homolog OS=Danio rerio GN=zgc:66014 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.363e-14
Identity = 46/185 (24.86%), Postives = 94/185 (50.81%), Query Frame = 1
Query:   13 LWEMVVSSNIDMKINAANLLKVIVPYINAKVTSMQVLPALVTLGSDQNLNVKYASIDAFGAVAQHFKNDMIVDKIRVQMDAFLED----GSHEXXXXXXXXXXXXXPHTTERLRD-YLLSKIFQLSAVPSSSSDVMRRRERANAFCESIRALDATELSATSVRDFLLPAIQNLLKDADSLDPAHK 552
            LW  VV ++  ++  AA + +++V  +N  + + +V+PAL+TL SD  ++V+ ++I AFG + +      +++++++Q+ +FLED      H              P+   R RD ++L  + +L+   +  +   +R + A    E+  AL    +S   + +  LP ++ L  D + L P H+
Sbjct:  942 LWYGVVHTSALVRCTAARMFELLVKGVNETLVAQRVVPALITLSSDPEISVRISTIPAFGTIMETVTQKELLERVKMQLASFLEDPQYQDQHSLHMEIIKTFGRVGPNAEPRFRDEFVLPHLHKLALCNNQQTVESKRIDIATQLFEAYSALSCCFISEELMVNHFLPGLRCLRTDMEQLSPEHE 1126          
BLAST of EY679932 vs. ExPASy Swiss-Prot
Match: K1468_MOUSE (LisH domain and HEAT repeat-containing protein KIAA1468 OS=Mus musculus GN=Kiaa1468 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.773e-13
Identity = 46/185 (24.86%), Postives = 94/185 (50.81%), Query Frame = 1
Query:   13 LWEMVVSSNIDMKINAANLLKVIVPYINAKVTSMQVLPALVTLGSDQNLNVKYASIDAFGAVAQHFKNDMIVDKIRVQMDAFLED----GSHEXXXXXXXXXXXXXPHTTERLRD-YLLSKIFQLSAVPSSSSDVMRRRERANAFCESIRALDATELSATSVRDFLLPAIQNLLKDADSLDPAHK 552
            LW  VV ++  ++  AA + +++V  +N  + + +V+PAL+TL SD  ++V+ A+I AFG + +      +++++++Q+ +FLED      H              P+   R RD +++  + +L+ V +      ++ + A    E+  AL    +S   + +  LP ++ L  D + L P H+
Sbjct:  969 LWYGVVHTSALVRCTAARMFELLVKGVNETLVAQRVVPALITLSSDPEISVRIATIPAFGTIMETVIQRELLERVKMQLASFLEDPQYQDQHSLHTEVIRTFGRVGPNAEPRFRDEFVIPHLHKLALVNNLQIVDSKKLDIATHLFEAYSALSCCFISEDLMVNHFLPGLRCLRTDMEHLSPEHE 1153          
BLAST of EY679932 vs. ExPASy Swiss-Prot
Match: K1468_HUMAN (LisH domain and HEAT repeat-containing protein KIAA1468 OS=Homo sapiens GN=KIAA1468 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.420e-11
Identity = 46/185 (24.86%), Postives = 90/185 (48.65%), Query Frame = 1
Query:   13 LWEMVVSSNIDMKINAANLLKVIVPYINAKVTSMQVLPALVTLGSDQNLNVKYASIDAFGAVAQHFKNDMIVDKIRVQMDAFLED----GSHEXXXXXXXXXXXXXPHTTERLRD-YLLSKIFQLSAVPSSSSDVMRRRERANAFCESIRALDATELSATSVRDFLLPAIQNLLKDADSLDPAHK 552
            LW  VV ++  ++  AA + ++ +  ++  +   +V PALVTL SD   +V+ A+I AFG + +      +++++++Q+ +FLED      H              P+   R RD +++  + +L+ V +      +R + A    E+  AL    +S   + +  LP ++ L  D + L P H+
Sbjct:  969 LWYGVVHTSALVRCTAARMFELTLRGMSEALVDKRVAPALVTLSSDPEFSVRIATIPAFGTIMETVIQRELLERVKMQLASFLEDPQYQDQHSLHTEIIKTFGRVGPNAEPRFRDEFVIPHLHKLALVNNLQIVDSKRLDIATHLFEAYSALSCCFISEDLMVNHFLPGLRCLRTDMEHLSPEHE 1153          
The following BLAST results are available for this feature:
BLAST of EY679932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
K1468_XENTR2.989e-1526.49LisH domain and HEAT repeat-containing protein KIA... [more]
K1468_DANRE7.363e-1424.86LisH domain and HEAT repeat-containing protein KIA... [more]
K1468_MOUSE4.773e-1324.86LisH domain and HEAT repeat-containing protein KIA... [more]
K1468_HUMAN3.420e-1124.86LisH domain and HEAT repeat-containing protein KIA... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-F02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679932 ID=EY679932; Name=EY679932; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGCTTATGGGAAATGGTTGTCAGCTCCAACATAGATATGAA
AATCAATGCTGCCAATCTGTTGAAAGTCATTGTACCATATATCAATGCAA
AAGTTACTTCTATGCAAGTTTTGCCTGCCTTAGTTACTCTTGGCTCTGAT
CAAAACCTGAATGTGAAGTATGCTAGCATTGATGCATTTGGAGCTGTGGC
GCAACACTTTAAAAATGACATGATTGTTGATAAAATACGTGTTCAAATGG
ATGCTTTTCTTGAAGATGGATCCCATGAAGCTACTGTTGCAGTGGTCCGT
GCATTGGCAGTGGCAGTACCGCATACAACAGAAAGACTTAGAGATTATCT
GTTATCCAAGATTTTCCAACTTTCAGCCGTTCCTTCTTCTTCAAGTGATG
TTATGCGTCGCCGTGAGAGAGCTAATGCTTTCTGTGAATCAATTCGTGCT
TTGGATGCTACAGAACTTTCTGCCACTAGTGTTCGGGATTTCTTATTACC
AGCTATACAAAATCTTTTAAAAGACGCAGATTCACTAGATCCGGCACATA
AAGAAGCCCCTTGAAATAATAATGAAAGATAGGTCTGGTGGGACTTTAGA
GACTATCAGTAAGGTAATGGGTGCTCCTCTTGGGATTACATCCTCAGTGA
CCACCTTCTTTGGTGGTGGCGTTGGCGAAGGGCTGCTGGGTAAAAAAAAA
ATTGCGAAACAATCCACAAAACCCAGTTTCACCTACCGGAACCTCCCCCC
TCCGGCTCCACCAAAGAAACTAAATTCCTGGCAAACATGAGGGGGAATTT
TTGTGGTGGAATGCTTAAGGGGGCAAACCAAAAACCCGTGAAAATATCTT
CCCGGAACCCAAAACACCTTAAAAATTTTTTTTTTTTTAAAAATTAAATT
TTGGTTTTCA
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