EY679929

Overview
NameEY679929
Unique NameEY679929
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length952
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679929 vs. ExPASy Swiss-Prot
Match: T11L1_HUMAN (T-complex protein 11-like protein 1 OS=Homo sapiens GN=TCP11L1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.213e-11
Identity = 47/176 (26.70%), Postives = 91/176 (51.70%), Query Frame = 1 
Query:   67 NIIKAKIRETMEKAFWDGIAESVKQGEHNYDRIIQLVREVRDEICGM---APQSWKEEITEAIDPEILSQVLSSGSLDIDYLGRILEFALTTLQKLSAPANDDDMKANHQRLLKELAEICQIRDESNYSHVNAM-IKGLRFVLEQIR--ALQQEIIRARMRMMEPFLKGPAGLEYL 576
            N +K +++E + KAFWD ++  + +    YD  I+LV E+++ +           + +ITE +D +++ Q   +G+LDI    ++ EF +  +  L APA D+++K      LK++ EI  +  E  +S ++ M +    F +  IR   +QQ +   R +  E   + P  L+++
Sbjct:   98 NSLKKRVKEIVHKAFWDCLSVQLSEDPPAYDHAIKLVGEIKETLLSFLLPGHTRLRNQITEVLDLDLIKQEAENGALDI---SKLAEFIIGMMGTLCAPARDEEVKK-----LKDIKEIVPLFREI-FSVLDLMKVDMANFAISSIRPHLMQQSVEYERKKFQEILERQPNSLDFV 264
The following BLAST results are available for this feature:
BLAST of EY679929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
T11L1_HUMAN6.213e-1126.70T-complex protein 11-like protein 1 OS=Homo sapien... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-E10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679929 ID=EY679929; Name=EY679929; organism=Citrus sinensis; type=EST; length=952bp
AATGAATATGTCCACAATCAGCACTATGCTGCTTTTGATATATTCACTGT
CAATAATGAAAAACCAAACATTATCAAGGCTAAGATTAGAGAAACAATGG
AGAAGGCTTTTTGGGATGGTATTGCAGAATCTGTGAAACAAGGTGAACAC
AACTATGACCGAATTATTCAACTTGTGAGGGAAGTGAGGGATGAAATTTG
TGGGATGGCTCCCCAAAGCTGGAAAGAAGAGATTACCGAAGCTATTGATC
CAGAAATTCTTTCTCAGGTGCTGAGTTCAGGTAGCCTGGATATTGACTAC
CTTGGAAGGATTCTAGAGTTTGCATTGACCACTTTGCAGAAACTTTCCGC
CCCTGCTAATGATGATGATATGAAGGCTAATCACCAGAGGTTGTTGAAAG
AGTTAGCTGAGATATGTCAGATCAGAGATGAATCGAACTATTCACATGTC
AATGCAATGATCAAGGGTTTGCGCTTTGTTCTTGAGCAGATTCGAGCTCT
TCAGCAAGAGATAATCAGGGCACGTATGAGAATGATGGAGCCTTTTTTGA
AAGGGCCTGCTGGTTTGGAGTATCTTAGAAAAGGTTTTGCTGACCGTTAT
GGACCTCCTTCTGACGCGCACACCTCTCTACCGGTGACTTTGCAGTGCCT
TTCATCTATTCGGAATTGCAAAGATTATAATGGGAAAAAACCCAAGAGTT
CCCCCTCACCTCTGGGGAGCCCAGGAAACATCCTCTGGGTTGGCCCCTGC
CTTCCACCCCCCCTTAAAACTGGGGGGAAACCTTTCCAATTTAAAAACAA
GTGGGAAACCCAAATCCCCATCCTCTCCCCCACCCTTCTGAAGTGGTCCA
AAACATTTACAGTTTTAAATCCCCCCCCCCCAAAAAGTGGCAAGGGGGGG
AAAAAAACTTTTTATTTTTTGAAGGGGGGAGAGGCGTTGGGGCCCCGGTT
TT
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