EY679928

Overview
NameEY679928
Unique NameEY679928
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length948
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679928 vs. ExPASy Swiss-Prot
Match: NAC8_ARATH (NAC domain-containing protein 8 OS=Arabidopsis thaliana GN=NAC008 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 5.975e-46
Identity = 99/228 (43.42%), Postives = 127/228 (55.70%), Query Frame = 3 
Query:   12 GGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQ---AKYGDKIEQDILEST-GAIIPKVDPVTPKLVTPDPPRTER-------------HPDFGPRQESPTTDAFDQQSEIRHVEEVQPLCENPGSNDKIE--AENHANVMVG-------NNDNGSQAGDDSKWWDSESQNILDTQQLAEALTLCEEFLNSQS-DGNANDGTSKGK-PGLSDYAQLGSELLKK 611
            GGKA KTNWVMHQYHLG EEDEK+ DYV+SKI YQQ Q    K GDK EQ++ E    A+ P  DPVTPKL TP+P    R               D+    E    +  +       V+ +QP  E P S  ++E   EN A  M+        + DN +Q  +D  W+DS SQ IL++QQL EAL+LC++ L SQ  + N N G+ K K P ++DYA LG E  K+
Sbjct:  177 GGKAVKTNWVMHQYHLGIEEDEKEGDYVVSKIFYQQPQQLVVKRGDKAEQEVSEDIFAAVTPTADPVTPKLATPEPRNAVRICSDSHIASDYVTPSDYVSAHEVSLAETSEVMCMEDEVQSIQPNHERPSSGPELEHGLENGAKEMLDDKEEQEKDRDNENQGEEDPTWFDSGSQFILNSQQLVEALSLCDDLLGSQDREENTNSGSLKDKQPCIADYAHLGPEDFKR 404

HSP 2 Score: 46.9802 bits (110), Expect = 5.975e-46
Identity = 19/25 (76.00%), Postives = 23/25 (92.00%), Query Frame = 1 
Query:  607 KRDLEECQMLIHDPANIELDTPPKF 681
            KRDLEECQ ++ DP+NIELDTPP+F
Sbjct:  403 KRDLEECQKIVLDPSNIELDTPPEF 427
The following BLAST results are available for this feature:
BLAST of EY679928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NAC8_ARATH5.975e-4643.42NAC domain-containing protein 8 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-E09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679928 ID=EY679928; Name=EY679928; organism=Citrus sinensis; type=EST; length=948bp
GCATGGTCAGAGGAGGGAAAGCTGAGAAAACTAATTGGGTGATGCACCAG
TATCACTTGGGAACAGAGGAGGATGAAAAGGATAGGGACTATGTTATATC
TAAAATATCTTATCAGCAGCAACAGGCCAAGTATGGTGATAAAATTGAAC
AAGATATTCTTGAAAGCACTGGTGCCATCATTCCAAAAGTAGATCCAGTC
ACTCCCAAGTTAGTGACTCCAGACCCACCTCGTACTGAAAGGCATCCTGA
TTTTGGCCCACGGCAAGAGTCTCCTACTACAGATGCATTTGATCAGCAAT
CTGAGATAAGGCATGTGGAAGAGGTTCAACCTTTATGTGAAAACCCCGGT
TCTAATGATAAAATTGAAGCAGAAAATCATGCTAATGTGATGGTTGGTAA
TAATGATAACGGAAGTCAAGCAGGAGACGACAGCAAATGGTGGGACAGTG
AATCGCAGAATATCTTGGATACGCAACAACTAGCAGAAGCGCTGACTCTA
TGCGAGGAGTTCTTGAACAGCCAGTCTGATGGAAATGCAAATGACGGAAC
ATCAAAGGGGAAACCTGGTCTTTCTGATTATGCTCAGTTAGGATCTGAAC
TTTTGAAAAAGGGATTTGGAGGAATGTCAGATGCTAATCCATGATCCTGC
AAACATAGAACTCGATACACCTCCCAAATTTTGGACTTGAGCCACTTTGA
ATTAACTTCCAGGGAAATTTCCTTCCCTTCCGGGGGAACCAAGGGCATCA
AACTATTTCTGGGATTTTCCGGGGTTTGGTTTTTTGAAAAACTTGGCCCT
CCAAACCCTTCCTCCGGGACTTTTTGAACCCCCAATTTTTTTGCCCCCAA
ATCCCAAACCAAAACCTTTTGGGTTTTTTGAAATTTGTAAACGGAGAGGC
GGAAAAATTTTTTCTTTTTTTGGGGGAAAAAAGCCCCCATACCCCGGT
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