EY679917

Overview
NameEY679917
Unique NameEY679917
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679917 vs. ExPASy Swiss-Prot
Match: SCMC1_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.575e-12
Identity = 29/97 (29.90%), Postives = 53/97 (54.64%), Query Frame = 3
Query:  255 ERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDAL 545
            E   R  +LF   D    G +D  +++ GL +L IP      + +F   D N+DG++D++EF +Y+   E ++   F+++D  ++G I P E+  +L
Sbjct:   19 EPPTRYETLFRALDRNGDGVVDIGELQQGLQSLGIPLGQDAEEKIFTTGDVNKDGKLDFEEFMKYLKDHEKKMKLAFKSLDKNNDGKIEPSEIVQSL 115          

HSP 2 Score: 32.3426 bits (72), Expect = 1.575e-12
Identity = 11/37 (29.73%), Postives = 21/37 (56.76%), Query Frame = 2
Query:  569 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYP 679
            G+ IS+++    ++ +D D    + + EWRD+ L  P
Sbjct:  119 GLHISEKQAELILQSIDSDGTMTVDWNEWRDYFLFNP 155          
BLAST of EY679917 vs. ExPASy Swiss-Prot
Match: SCMC1_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2)

HSP 1 Score: 58.9214 bits (141), Expect = 1.651e-11
Identity = 31/109 (28.44%), Postives = 55/109 (50.46%), Query Frame = 3
Query:  219 DHVLLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDAL 545
            D VL        E+  R  +LF   D    G +D  +++ GL  L IP      + +F   D N+DG++D++EF +Y+   E ++   F+++D  ++G I   E+  +L
Sbjct:    7 DFVLPTAACQDAEQPTRYETLFQALDRNGDGVVDIGELQEGLRNLGIPLGQDAEEKIFTTGDVNKDGKLDFEEFMKYLKDHEKKMKLAFKSLDKNNDGKIEASEIVQSL 115          

HSP 2 Score: 31.5722 bits (70), Expect = 1.651e-11
Identity = 11/37 (29.73%), Postives = 21/37 (56.76%), Query Frame = 2
Query:  569 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYP 679
            G+ IS+++    ++ +D D    + + EWRD+ L  P
Sbjct:  119 GLTISEQQAELILQSIDVDGTMTVDWNEWRDYFLFNP 155          
BLAST of EY679917 vs. ExPASy Swiss-Prot
Match: SCMC1_BOVIN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Bos taurus GN=SLC25A24 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.651e-11
Identity = 28/97 (28.87%), Postives = 53/97 (54.64%), Query Frame = 3
Query:  255 ERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDAL 545
            E   R  +LF   D    G +D ++++ GL +L IP      + +F   D N+DG++D++EF +Y+   E ++   F+++D  ++G I   E+  +L
Sbjct:   19 EPPTRYETLFQKLDRNGDGVVDISELQEGLKSLGIPLGQDAEEKIFTTGDVNKDGKLDFEEFMKYLKDHEKKMKLAFKSLDKNNDGKIEASEIVQSL 115          

HSP 2 Score: 31.9574 bits (71), Expect = 1.651e-11
Identity = 11/37 (29.73%), Postives = 21/37 (56.76%), Query Frame = 2
Query:  569 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYP 679
            G+ IS+++    ++ +D D    + + EWRD+ L  P
Sbjct:  119 GLTISEQQAELILQSIDADGTMTVDWNEWRDYFLFNP 155          
BLAST of EY679917 vs. ExPASy Swiss-Prot
Match: SCMC1_RABIT (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 2.144e-11
Identity = 28/97 (28.87%), Postives = 52/97 (53.61%), Query Frame = 3
Query:  255 ERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDAL 545
            E   R  +LF   D    G +D  +++ GL +L IP      + +F   D N+DG++D++EF +Y+   E ++   F+++D  ++G I   E+  +L
Sbjct:   19 EPPTRYETLFQALDRNGDGVVDIRELQEGLKSLGIPLGQDAEEKIFTTGDVNKDGKLDFEEFMKYLKDHEKKMKLAFKSLDKNNDGKIEASEIVQSL 115          

HSP 2 Score: 31.9574 bits (71), Expect = 2.144e-11
Identity = 11/37 (29.73%), Postives = 21/37 (56.76%), Query Frame = 2
Query:  569 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYP 679
            G+ IS+++    ++ +D D    + + EWRD+ L  P
Sbjct:  119 GLTISEQQAELILQSIDADGTMTVDWNEWRDYFLFNP 155          
The following BLAST results are available for this feature:
BLAST of EY679917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
SCMC1_MOUSE1.575e-1229.90Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC1_HUMAN1.651e-1128.44Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC1_BOVIN1.651e-1128.87Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC1_RABIT2.144e-1128.87Calcium-binding mitochondrial carrier protein SCaM... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-D10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679917 ID=EY679917; Name=EY679917; organism=Citrus sinensis; type=EST; length=921bp
CGATTTTTCAATTTCCTTTATCAGATTATACATACAAGTTCCAGATTGAA
TCGATGCTTGTGGAGCAACAATCGAATCTCGTAATTTTGATTAAAATCTA
GGGGCAGATGACCGGAGCAGGGGCAGGACACGCGGTGGAACGCGTCGGAT
TGCCAAAGATGGAGTCGACCCGCTCCGCTTCATGCAACCCGGTGAGGAAA
TCGGGTCCGGTCACGATGGACCACGTGCTGCTCGCGTTACGCGAGAGCAA
GGAAGAGAGGGACATCCGAATCCGGAGCCTCTTCAATTTCTTCGATGCGG
CGAATTCCGGATACTTGGATTACGCGCAGATCGAGAGCGGGTTGTCGGCG
CTGCAGATTCCGGCACAGTACAAGTACGCGAAGGATTTGTTCAAAGTCTG
CGACGCAAACAGAGACGGACGCGTCGATTATCAGGAGTTTCGTCGATACA
TGGACATTAAAGAGATGGAGCTTTATAAGATTTTTCAAACTATTGATGTC
GAGCACAATGGATGCATTTTGCCCGAAGAGCTTTGGGACGCGCTTGTTAA
GGCTGTTTCTGTTTTTCAGGGATCGAGATTAGTGACGAGGAATTGGCTCG
TTTTGTGGAGCATGTTGATAAGGATAATAATGGAATCATAACTTTTGAAG
AATGGAGAGATTTCCTTCTACTCTATCCTCATGAAGCAACTATTGAAATA
TTTTTCATCATTGGGAGAAGGTATGCCTCGTAAAATATTGAAGAACAGGC
TGGTTTTTCCAAAAGGGATCCGTAAACCTGGTTCAAAAAACCAAAACCTT
TATTTGCGGGAGGAAATACCGAGGGGCTGGTTTTCCCTATTGGAACTTGC
CCCCTCCTTGACCCCCCTGAAAGGGTTGTTTTTTGAAATTTCCAGAAAGG
GGCCCCAACCTTCCTGTTTTT
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