EY679913
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY679913 vs. ExPASy Swiss-Prot
Match: TSSC1_DANRE (Protein TSSC1 OS=Danio rerio GN=tssc1 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.368e-21 Identity = 52/166 (31.33%), Postives = 92/166 (55.42%), Query Frame = 1 Query: 40 CHV-----GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILVS 501 CH+ G + CVLW G +++S+ E ++ LW L S+ A + S + G L + + G W PH + +A +++++ WDLRSM + IE+AH VR++D++ K++ L + D+ + WD+R + P++ L H+HW W+V N +D +L + Sbjct: 127 CHLDNSAHGSMACVLWEPMGDGKRVISLAENHVLLWDLQESSAKATISSSATLEGKGQLKF-TAGKWSPHHNCTQLATANDTAIRGWDLRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDVRHISEPVKCLEEHSHWVWSVRYNHSHDQLLLTA 291
BLAST of EY679913 vs. ExPASy Swiss-Prot
Match: TSSC1_RAT (Protein TSSC1 OS=Rattus norvegicus GN=Tssc1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.980e-21 Identity = 53/164 (32.32%), Postives = 89/164 (54.27%), Query Frame = 1 Query: 40 CHV-----GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFIL 495 CH+ G + CV+W G K++S+ + +I LW L S+ A + S + G L + SG W PH + VA +++++ WD RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W+V N +D +L Sbjct: 127 CHLDNGAQGNVACVVWEPMGDGKKVISLADSHILLWDLQPSSSQAVLASSAALEGRGQLKFTSG-RWSPHHNCTQVATASDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWSVRYNHSHDQLVL 289
BLAST of EY679913 vs. ExPASy Swiss-Prot
Match: TSSC1_MOUSE (Protein TSSC1 OS=Mus musculus GN=Tssc1 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.788e-21 Identity = 52/164 (31.71%), Postives = 89/164 (54.27%), Query Frame = 1 Query: 40 CHV-----GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFIL 495 CH+ G + CV+W G K++S+ + +I LW L S+ A + S + G L + + G W PH + VA +++++ WD RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W+V N +D +L Sbjct: 127 CHLDNSAQGNVACVVWEPMGDGKKVISLADSHILLWDLQPSSSQAVLASSATLEGRGQLKF-TAGRWSPHHNCTQVATASDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWSVRYNHSHDQLVL 289
BLAST of EY679913 vs. ExPASy Swiss-Prot
Match: TSSC1_PONAB (Protein TSSC1 OS=Pongo abelii GN=TSSC1 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.512e-20 Identity = 54/164 (32.93%), Postives = 88/164 (53.66%), Query Frame = 1 Query: 40 CHV-----GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS---SGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFIL 495 CH+ G + CV+W G K++S+ + +I LW L S+ A + S S G L + SG W PH + VA +++++ WD RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W V N +D +L Sbjct: 154 CHLDNTAHGNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLEGKGQLKFTSG-RWSPHHNCTQVATANDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWNVRYNHSHDQLVL 316
BLAST of EY679913 vs. ExPASy Swiss-Prot
Match: TSSC1_HUMAN (Protein TSSC1 OS=Homo sapiens GN=TSSC1 PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.512e-20 Identity = 54/164 (32.93%), Postives = 88/164 (53.66%), Query Frame = 1 Query: 40 CHV-----GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS---SGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFIL 495 CH+ G + CV+W G K++S+ + +I LW L S+ A + S S G L + SG W PH + VA +++++ WD RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W V N +D +L Sbjct: 127 CHLDNTAHGNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLEGKGQLKFTSG-RWSPHHNCTQVATANDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWNVRYNHSHDQLVL 289
BLAST of EY679913 vs. ExPASy Swiss-Prot
Match: TSSC1_XENTR (Protein TSSC1 OS=Xenopus tropicalis GN=tssc1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 7.506e-20 Identity = 51/164 (31.10%), Postives = 88/164 (53.66%), Query Frame = 1 Query: 40 CHV-----GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFIL 495 CH+ G + CV W G KL+S+ + + +W L S+ + + S + G L + SG W PH + VA +++++ WD+RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W+V N +D +L Sbjct: 127 CHLDNTAHGNMACVTWEPLGDGKKLLSLADNYLMIWDLQESSTKSVLSSSVTLEGKGQLRFTSG-KWSPHHNCTQVATANDTAIRGWDIRSMRQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNIHEPVKTLEEHSHWVWSVRYNHSHDQLVL 289
BLAST of EY679913 vs. ExPASy Swiss-Prot
Match: TSSC1_XENLA (Protein TSSC1 OS=Xenopus laevis GN=tssc1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 7.506e-20 Identity = 51/164 (31.10%), Postives = 88/164 (53.66%), Query Frame = 1 Query: 40 CHV-----GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFIL 495 CH+ G + CV W G KL+S+ + + +W L S+ + + S + G L + SG W PH + VA +++++ WD+RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W+V N +D +L Sbjct: 127 CHLDSTAHGNMACVTWEPLGDGKKLLSLADNYLLIWDLQESSTKSVLSSSATLEGKGQLRFTSG-KWSPHHNCTQVATANDTAIRGWDIRSMRQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNIHEPVKTLEEHSHWVWSVRYNHSHDQLVL 289
BLAST of EY679913 vs. ExPASy Swiss-Prot
Match: TSSC1_MACFA (Protein TSSC1 OS=Macaca fascicularis GN=TSSC1 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.672e-19 Identity = 52/164 (31.71%), Postives = 87/164 (53.05%), Query Frame = 1 Query: 40 CHV-----GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS---SGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFIL 495 CH+ + CV+W G K++S+ + +I LW L S+ A + S S G L + SG W PH + VA +++++ WD R+M + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W V N +D +L Sbjct: 127 CHLDNTAHSNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLGGKGQLKFTSG-RWSPHHNCTQVATANDTTLRGWDTRTMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWNVRYNHSHDQLVL 289
BLAST of EY679913 vs. ExPASy Swiss-Prot
Match: TSSC1_GECJA (Protein TSSC1 OS=Gecko japonicus GN=TSSC1 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.852e-19 Identity = 51/166 (30.72%), Postives = 88/166 (53.01%), Query Frame = 1 Query: 40 CHV-----GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILVS 501 CH+ G + VLW G KL+S+ + ++ LW L S+ A + + + G L + SG W PH + VA +++++ WD+R+M + IE AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W V N +D +L + Sbjct: 127 CHLDNTAHGNMAGVLWEPMGDGKKLISLADNHLLLWDLQESSSKAVLSNSAALEGKGQLKFTSG-RWSPHHNCTQVATANDTAIRGWDIRTMSQIYCIESAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVSDPVKTLEEHSHWVWNVRYNHSHDQLVLTA 291
BLAST of EY679913 vs. ExPASy Swiss-Prot
Match: TSSC1_DICDI (Protein tssc1 homolog OS=Dictyostelium discoideum GN=tssc1 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.849e-18 Identity = 50/156 (32.05%), Postives = 88/156 (56.41%), Query Frame = 1 Query: 43 HVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILVS 501 H G I +L SG ++ ++S+D+ NI LWS ++N KQ G L LS G+ +P+ N +A + +++ WD R+ +T S++ AH +R++D++ K + L++A D+ + +WD R + P++ GH HW W+ N +D I+ S Sbjct: 139 HTGIIKPILCDPSGSNNFIISLDDSNIRLWS-KIDDQNEPTVIKQF-GNLSKLSVGSINPNISNQLATANDVNIKGWDFRNAKETFSMDKAHSEQIRDIDFNPNKPYYLLSAGDDCKLKIWDTRQTRDPVKIFSGHNHWIWSAKFNRYHDQLIITS 292 The following BLAST results are available for this feature:
BLAST of EY679913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY679913 ID=EY679913; Name=EY679913; organism=Citrus sinensis; type=EST; length=966bpback to top |