EY679908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY679908 vs. ExPASy Swiss-Prot
Match: RPT2_ARATH (Root phototropism protein 2 OS=Arabidopsis thaliana GN=RPT2 PE=1 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 2.432e-47 Identity = 80/99 (80.81%), Postives = 90/99 (90.91%), Query Frame = 1 Query: 277 PLNKR-FSSAKERTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLIIESKEADLTRINLSNIPGGPEMFEKAAKFCYGVNFEITVHNVAAL 570 P+N SS+ RTGQWVFSQ+IPTD+VV VGEANF LHKFMLVAKSNYIRKLI+ESK++D+TRINLS+IPGGPE+FEKAAKFCYGVNFEITV NVAAL Sbjct: 8 PINMNSMSSSLARTGQWVFSQDIPTDVVVEVGEANFSLHKFMLVAKSNYIRKLIMESKDSDVTRINLSDIPGGPEIFEKAAKFCYGVNFEITVQNVAAL 106 HSP 2 Score: 48.521 bits (114), Expect = 2.432e-47 Identity = 30/50 (60.00%), Postives = 34/50 (68.00%), Query Frame = 2 Query: 575 CAAEFLQMTDKYCENNLGWSH*KTSSSQVAFVKSPLGPLVGLKSGETLLP 724 CAAEFLQMTDKYC+NNL + SQVA + S G +V LKS E LLP Sbjct: 108 CAAEFLQMTDKYCDNNLA-GRTQDFLSQVA-LSSLSGAIVVLKSCEILLP 155
BLAST of EY679908 vs. ExPASy Swiss-Prot
Match: Y5880_ARATH (BTB/POZ domain-containing protein At5g48800 OS=Arabidopsis thaliana GN=At5g48800 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.893e-21 Identity = 44/91 (48.35%), Postives = 68/91 (74.73%), Query Frame = 1 Query: 298 SAKERTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLIIESKEADLTRINLSNIPGGPEMFEKAAKFCYGVNFEITVHNVAAL 570 S+++ +W+F +++P+DI + V NF LHKF LV++S IR+++ E +++D++++ L N+PGG E FE AAKFCYG+NFEIT NVA L Sbjct: 28 SSRQSCSEWIF-RDVPSDITIEVNGGNFALHKFPLVSRSGRIRRIVAEHRDSDISKVELLNLPGGAETFELAAKFCYGINFEITSSNVAQL 117
BLAST of EY679908 vs. ExPASy Swiss-Prot
Match: RPT3_ARATH (Root phototropism protein 3 OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.649e-19 Identity = 38/87 (43.68%), Postives = 61/87 (70.11%), Query Frame = 1 Query: 310 RTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLIIESKEADLTRINLSNIPGGPEMFEKAAKFCYGVNFEITVHNVAAL 570 R W + +IP+D++V +G+ NF LHK+ L+++S + +LI ES++ D T + L ++PGGPE FE A+KFCYGV ++T N++ L Sbjct: 41 RGQSWFVATDIPSDLLVKIGDMNFHLHKYPLLSRSGKMNRLIYESRDPDPTILILDDLPGGPEAFELASKFCYGVPVDLTATNISGL 127 HSP 2 Score: 27.7202 bits (60), Expect = 6.649e-19 Identity = 12/25 (48.00%), Postives = 17/25 (68.00%), Query Frame = 2 Query: 551 STTLQLCRCAAEFLQMTDKYCENNL 625 +T + RCAAE+L+MT+ E NL Sbjct: 121 ATNISGLRCAAEYLEMTEDLEEGNL 145
BLAST of EY679908 vs. ExPASy Swiss-Prot
Match: Y1044_ARATH (BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 1.167e-14 Identity = 46/95 (48.42%), Postives = 61/95 (64.21%), Query Frame = 1 Query: 295 SSAKERTGQ-WVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLIIE-SKEAD-LTRINLSNIPGGPEMFEKAAKFCYGVNFEITVHNVAAL 570 S A +R GQ W + +P+DIVV VGE +F LHKF L+++S + + I E SKE D I +S++PGG + FE AKFCYGV E+T NV L Sbjct: 10 SDAFQRQGQAWFCTTGLPSDIVVEVGEMSFHLHKFPLLSRSGVMERRIAEASKEGDDKCLIEISDLPGGDKTFELVAKFCYGVKLELTASNVVYL 104
BLAST of EY679908 vs. ExPASy Swiss-Prot
Match: NPH3_ORYSJ (Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica GN=CPT1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.495e-13 Identity = 31/96 (32.29%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 310 RTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLIIESKEAD---------LTRINLSNIPGGPEMFEKAAKFCYGVNFEITVHNVAAL 570 R W + +IP+D++V VG+ NF LHK+ ++++S + + + ES AD + + + ++PGG FE AA+F YG+ ++T N++ L Sbjct: 39 RDRSWYVNSDIPSDLLVKVGDVNFYLHKYPMISRSGRMSRAVYESSAADEAEADAAAAVAVVEMGDLPGGAGSFELAARFSYGMAVDLTAANISGL 134 HSP 2 Score: 27.335 bits (59), Expect = 5.495e-13 Identity = 11/18 (61.11%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 572 RCAAEFLQMTDKYCENNL 625 RCAAE+L+MT++ E NL Sbjct: 135 RCAAEYLEMTEEMEEGNL 152 The following BLAST results are available for this feature:
BLAST of EY679908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY679908 ID=EY679908; Name=EY679908; organism=Citrus sinensis; type=EST; length=932bpback to top |