EY744786

Overview
NameEY744786
Unique NameEY744786
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1056
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig804 contig Csv1_Contig804:586..1641. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY744786 vs. ExPASy Swiss-Prot
Match: TRAC9_MAIZE (Putative AC9 transposase OS=Zea mays PE=4 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.958e-16
Identity = 46/182 (25.27%), Postives = 88/182 (48.35%), Query Frame = 2 
Query:   38 IYLREKQRLLNFISGIHGRVNLALDLWSSNQSVGYAVLTGHFIDGDWNLHHRVLNVVMVPSPDSDVAFNQALASCLSDWRLENKLLTLTLDRSFSNE-TINGNLRGFLSVKNPFMLNCQLIKGNCYARVISRLAQDALGAIWETVDKIRASVKYVKTSDTHEEKFLELKERLQVPSTKETFY 580
            +YL EK++L   +  +  R +  +D+W+S Q+  Y  +T H+ID DW L  R++    V    +    +Q   + +  W +E KL  L+LD + +NE  ++  +       +  + +       C   +++ +A+D L  I  T++KI+A V  VK+S    E+ ++      +  +K   Y
Sbjct:  222 LYLEEKEKLYGKLKDVQSRFSTTMDMWTSCQNKSYMCVTIHWIDDDWCLQKRIVGFFHVEGRHTGQRLSQTFTAIMVKWNIEKKLFALSLDNASANEVAVHDIIEDLQDTDSNLVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEKIKAIVLAVKSSPLQWEELMKCASECDLDKSKGISY 403
[Close]
BLAST of EY744786 vs. ExPASy Swiss-Prot
Match: TRA1_MAIZE (Putative AC transposase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.958e-16
Identity = 46/182 (25.27%), Postives = 88/182 (48.35%), Query Frame = 2 
Query:   38 IYLREKQRLLNFISGIHGRVNLALDLWSSNQSVGYAVLTGHFIDGDWNLHHRVLNVVMVPSPDSDVAFNQALASCLSDWRLENKLLTLTLDRSFSNE-TINGNLRGFLSVKNPFMLNCQLIKGNCYARVISRLAQDALGAIWETVDKIRASVKYVKTSDTHEEKFLELKERLQVPSTKETFY 580
            +YL EK++L   +  +  R +  +D+W+S Q+  Y  +T H+ID DW L  R++    V    +    +Q   + +  W +E KL  L+LD + +NE  ++  +       +  + +       C   +++ +A+D L  I  T++KI+A V  VK+S    E+ ++      +  +K   Y
Sbjct:  277 LYLEEKEKLYGKLKDVQSRFSTTMDMWTSCQNKSYMCVTIHWIDDDWCLQKRIVGFFHVEGRHTGQRLSQTFTAIMVKWNIEKKLFALSLDNASANEVAVHDIIEDLQDTDSNLVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEKIKAIVLAVKSSPLQWEELMKCASECDLDKSKGISY 458
The following BLAST results are available for this feature:
BLAST of EY744786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
TRAC9_MAIZE1.958e-1625.27Putative AC9 transposase OS=Zea mays PE=4 SV=1[more]
TRA1_MAIZE1.958e-1625.27Putative AC transposase OS=Zea mays PE=2 SV=2[more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-E06-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744786 ID=EY744786; Name=EY744786; organism=Citrus sinensis; type=EST; length=1056bp
GGCAAGCTTCAACACCATCCAGGGGGATTGTGTGGCAATATATCTAAGGG
AGAAGCAAAGACTTTTGAATTTTATTAGTGGAATTCATGGACGAGTCAAC
CTTGCATTGGATTTGTGGTCTTCAAATCAATCTGTAGGCTATGCAGTCCT
AACTGGGCATTTTATTGATGGTGATTGGAACTTGCATCATCGTGTTCTTA
ATGTGGTTATGGTTCCATCCCCTGACTCCGATGTTGCCTTCAATCAAGCG
CTCGCGTCTTGCCTATCTGATTGGCGTCTAGAGAACAAGTTGCTTACCCT
TACTCTTGATCGGTCCTTCTCAAATGAAACAATAAATGGAAATCTCAGAG
GCTTCCTTTCTGTCAAAAATCCATTTATGCTAAATTGTCAACTGATAAAA
GGGAATTGCTATGCTCGTGTTATTAGTCGCCTTGCACAAGATGCTCTAGG
AGCAATCTGGGAAACTGTCGATAAAATTCGTGCCAGCGTAAAGTATGTCA
AGACTTCAGATACTCATGAAGAGAAGTTTCTTGAGCTGAAGGAACGACTT
CAAGTCCCTAGTACGAAGGAAACTTTTTATTGATGACCAAACTAAATGGG
AAACCAACTTAACCATATGGTTGGTGGGCTGCTCATGAACCTAAAAGGAC
TTATTGCCTTGTTTGAAAACTTTTGATCCCTAACTACAAAAAACCAACCC
CAACAAGGGATGGATTGGAAAGAAGCGATAAAGTTCCCCCGGAACCATAT
ACTTTGAAAAAATTTCCCTTGGTGGGCGCAAAAATTTTAACCCCCCCCCA
AAATTTCCCTATGTGCCAGGGGGGTTCCAACCCGTAAAAGGGGCCAAAAA
TATTCGGGGAAAAAACTAGACCCAAGGCCCCCCCCTTGAATGGGAAAAAA
CCTTTTCCCCCCCCCCCCCCCTGACACCCAAAACCCCCTATAAAAAAAAA
AGGGGTTTGTTAATAAAAAATATGGAAAAAAAAACCGGGGTTTTCTTTTT
CAGTGTGGTGGGGGCGAAAAGTGTGGCCGCTTTGTTGTTTTTTTTTCCAC
CTTCTT
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