EY679882

Overview
NameEY679882
Unique NameEY679882
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 2.044e-96
Identity = 177/213 (83.10%), Postives = 188/213 (88.26%), Query Frame = 3
Query:   60 HVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTT-YLSSHCNSSSHVLDAAGCLVY*RTKFFMPQISTLASI 695
            HVD  VP+F+LEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSA FVASTLME GGVPQSAT E+LLKEAIHVISCGYEDKTEWG+EIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAY+NTT Y  +      + +  A CL+    KF +P+IS  ASI
Sbjct:  684 HVDSAVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAAFVASTLMEYGGVPQSATPESLLKEAIHVISCGYEDKTEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLIYCVLPAICLL--TGKFIIPEISNFASI 894          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 1.731e-95
Identity = 173/213 (81.22%), Postives = 190/213 (89.20%), Query Frame = 3
Query:   60 HVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTT-YLSSHCNSSSHVLDAAGCLVY*RTKFFMPQISTLASI 695
            HVD +VP+F+LEDIEEG+EG+GFDDEKSLLMSQMSLEKRFGQS+VFVASTLME GGVPQSAT E+LLKEAIHVISCGYEDK++WG+EIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAY+NTT Y  +      + +  A CL+    KF +P+IS  ASI
Sbjct:  676 HVDSSVPVFNLEDIEEGIEGSGFDDEKSLLMSQMSLEKRFGQSSVFVASTLMEYGGVPQSATPESLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLL--TGKFIIPEISNFASI 886          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 1.731e-95
Identity = 173/213 (81.22%), Postives = 190/213 (89.20%), Query Frame = 3
Query:   60 HVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTT-YLSSHCNSSSHVLDAAGCLVY*RTKFFMPQISTLASI 695
            HVD +VP+F+LEDIEEG+EG+GFDDEKSLLMSQMSLEKRFGQS+VFVASTLME GGVPQSAT E+LLKEAIHVISCGYEDK++WG+EIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAY+NTT Y  +      + +  A CL+    KF +P+IS  ASI
Sbjct:  676 HVDSSVPVFNLEDIEEGIEGSGFDDEKSLLMSQMSLEKRFGQSSVFVASTLMEYGGVPQSATPESLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLL--TGKFIIPEISNFASI 886          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2)

HSP 1 Score: 344.739 bits (883), Expect = 4.263e-94
Identity = 173/213 (81.22%), Postives = 184/213 (86.38%), Query Frame = 3
Query:   60 HVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTT-YLSSHCNSSSHVLDAAGCLVY*RTKFFMPQISTLASI 695
            H D TVP+F+L+DIEEGVEGAGFDDEK+LLMSQMSLEKRFGQSAVFVASTLMENGGVP SAT E LLKEAIHVISCGYEDK++WG EIGWIYGSVTEDILTGFKMHARGWRSIYCMPK PAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGY GRLKFLERFAYVNTT Y  +      +    A CL     +F +PQIS +ASI
Sbjct:  668 HTDSTVPVFNLDDIEEGVEGAGFDDEKALLMSQMSLEKRFGQSAVFVASTLMENGGVPPSATPENLLKEAIHVISCGYEDKSDWGMEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYNGRLKFLERFAYVNTTIYPITSIPLLMYCTLPAVCLF--TNQFIIPQISNIASI 878          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.966e-79
Identity = 145/211 (68.72%), Postives = 168/211 (79.62%), Query Frame = 3
Query:   66 DPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNT-TYLSSHCNSSSHVLDAAGCLVY*RTKFFMPQISTLASI 695
            D   P+F++EDI+EG EG  +DDE+S+LMSQ S+EKRFGQS VF+A+T ME GG+P +    TLLKEAIHVISCGYEDKTEWG EIGWIYGSVTEDILTGFKMHARGW SIYC P RPAFKGSAPINLSDRLNQVLRWALGS+EIL SRHCPIWYGY GRL+ LER AY+NT  Y  +     ++ +  A CL+    +F +P+IS  ASI
Sbjct:  687 DSNAPLFNMEDIDEGFEG--YDDERSILMSQRSVEKRFGQSPVFIAATFMEQGGIPPTTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCNPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYHGRLRLLERIAYINTIVYPITSIPLIAYCILPAFCLI--TDRFIIPEISNYASI 893          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 5.059e-79
Identity = 146/214 (68.22%), Postives = 168/214 (78.50%), Query Frame = 3
Query:   66 DPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNT-TYLSSHCNSSSHVLDAAGCLVY*RTKFFMPQISTLASIVVI 704
            + + PIF++EDIEEG+EG  ++DE+S+LMSQ  LEKRFGQS +F+AST M  GG+P S    +LLKEAIHVISCGYEDKTEWG EIGWIYGSVTEDILTGFKMHARGW SIYCMP RP FKGSAPINLSDRLNQVLRWALGSVEIL SRHCPIWYGY GRLK LER AY+NT  Y  +     ++ +  A CL+    KF +P+IS  A +  I
Sbjct:  682 ESSAPIFNMEDIEEGIEG--YEDERSVLMSQKRLEKRFGQSPIFIASTFMTQGGIPPSTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLL--TNKFIIPEISNYAGMFFI 891          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 5.059e-79
Identity = 146/214 (68.22%), Postives = 168/214 (78.50%), Query Frame = 3
Query:   66 DPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNT-TYLSSHCNSSSHVLDAAGCLVY*RTKFFMPQISTLASIVVI 704
            + + PIF++EDIEEG+EG  ++DE+S+LMSQ  LEKRFGQS +F+AST M  GG+P S    +LLKEAIHVISCGYEDKTEWG EIGWIYGSVTEDILTGFKMHARGW SIYCMP RP FKGSAPINLSDRLNQVLRWALGSVEIL SRHCPIWYGY GRLK LER AY+NT  Y  +     ++ +  A CL+    KF +P+IS  A +  I
Sbjct:  682 ESSAPIFNMEDIEEGIEG--YEDERSVLMSQKRLEKRFGQSPIFIASTFMTQGGIPPSTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLL--TNKFIIPEISNYAGMFFI 891          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 9.541e-78
Identity = 144/211 (68.25%), Postives = 167/211 (79.15%), Query Frame = 3
Query:   66 DPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNT-TYLSSHCNSSSHVLDAAGCLVY*RTKFFMPQISTLASI 695
            D  VP+F++EDI+E VEG  ++DE SLL+SQ  LEKRFGQS VF+A+T ME GG+P +    TLLKEAIHVISCGYE KT+WG EIGWIYGSVTEDILTGFKMHARGW SIYC+P RPAFKGSAPINLSDRLNQVLRWALGS+EIL SRHCPIWYGY GRLK LER AY+NT  Y  +     ++ +  A CL+     F +P+IS LAS+
Sbjct:  674 DSNVPLFNMEDIDEDVEG--YEDEMSLLVSQKRLEKRFGQSPVFIAATFMEQGGLPSTTNPLTLLKEAIHVISCGYEAKTDWGKEIGWIYGSVTEDILTGFKMHARGWISIYCVPSRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERIAYINTIVYPITSIPLLAYCMLPAFCLI--TNTFIIPEISNLASL 880          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 4.008e-76
Identity = 142/210 (67.62%), Postives = 167/210 (79.52%), Query Frame = 3
Query:   72 TVPIFSLEDIEEGVEGAGFDD-EKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNT-TYLSSHCNSSSHVLDAAGCLVY*RTKFFMPQISTLASI 695
            T  IF LEDIEEG+EG  +D+ EKS LMSQ + EKRFG S VF+ASTLMENGG+P++    +L+KEAIHVISCGYE+KTEWG EIGWIYGSVTEDILTGF+MH RGW+S+YCMPKRPAFKGSAPINLSDRL+QVLRWALGSVEI FSRHCP+WY +GG+LK LER AY+NT  Y  +     ++    A CL+    KF +P I+  ASI
Sbjct:  656 TEAIFDLEDIEEGLEG--YDELEKSSLMSQKNFEKRFGMSPVFIASTLMENGGLPEATNTSSLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFRMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYAWGGKLKILERLAYINTIVYPFTSIPLLAYCTIPAVCLL--TGKFIIPTINNFASI 861          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 8.358e-74
Identity = 142/210 (67.62%), Postives = 163/210 (77.62%), Query Frame = 3
Query:   84 FSLEDIEEGVEG-AGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGY-GGRLKFLERFAYVNTT-YLSSHCNSSSHVLDAAGCLVY*RTKFFMPQISTLASIVVI 704
            FS  D+   V    G + +K  LMS+M+ EK FGQS++FV STLME GGVP S++   LLKEAIHVISCGYEDKTEWG+E+GWIYGS+TEDILTGFKMH RGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEI FSRH P+WYGY GG+LK+LERFAY NTT Y  +     ++ +  A CL+    KF MP IST AS+  I
Sbjct:  636 FSKNDMNGDVAALGGAEGDKEHLMSEMNFEKTFGQSSIFVTSTLMEEGGVPPSSSPAVLLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLWYGYKGGKLKWLERFAYANTTIYPFTSIPLLAYCILPAICLL--TDKFIMPPISTFASLFFI 843          
The following BLAST results are available for this feature:
BLAST of EY679882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CESA8_ORYSJ2.044e-9683.10Probable cellulose synthase A catalytic subunit 8 ... [more]
CESA2_ORYSJ1.731e-9581.22Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA2_ORYSI1.731e-9581.22Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA3_ARATH4.263e-9481.22Cellulose synthase A catalytic subunit 3 [UDP-form... [more]
CESA1_ARATH2.966e-7968.72Cellulose synthase A catalytic subunit 1 [UDP-form... [more]
CESA1_ORYSJ5.059e-7968.22Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA1_ORYSI5.059e-7968.22Probable cellulose synthase A catalytic subunit 1 ... [more]
CESAA_ARATH9.541e-7868.25Probable cellulose synthase A catalytic subunit 10... [more]
CESA4_ARATH4.008e-7667.62Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA7_ARATH8.358e-7467.62Cellulose synthase A catalytic subunit 7 [UDP-form... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-A10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679882 ID=EY679882; Name=EY679882; organism=Citrus sinensis; type=EST; length=919bp
CCACGCGTCCGGAATTAAAATCGAGTAAAAAGGGCTCCGATAAGAAGAAA
TCCAGCAAGCATGTGGACCCTACTGTGCCCATATTTAGTCTTGAGGACAT
AGAGGAAGGAGTGGAAGGTGCTGGATTTGATGATGAAAAGTCACTACTTA
TGTCACAAATGAGCCTGGAGAAGCGATTTGGTCAATCAGCTGTTTTTGTT
GCTTCTACACTTATGGAGAATGGTGGTGTTCCACAGTCTGCAACACATGA
AACTCTTCTTAAGGAGGCCATTCATGTTATCAGTTGTGGTTACGAGGATA
AAACAGAATGGGGATCTGAGATAGGATGGATTTATGGTTCTGTTACGGAA
GATATTCTTACAGGATTCAAGATGCATGCCCGTGGTTGGCGGTCAATTTA
CTGCATGCCTAAGCGCCCAGCCTTTAAAGGGTCTGCTCCTATTAATCTTT
CAGATCGTCTAAACCAAGTGCTTCGGTGGGCTCTAGGTTCTGTGGAAATT
CTTTTCAGTCGGCACTGTCCTATCTGGTATGGTTATGGTGGTCGATTGAA
ATTTCTTGAGAGGTTTGCTTATGTGAACACCACCTATCTATCCTCTCACT
GCAATTCCTCTTCTCATGTATTGGACGCTGCCGGCTGTCTGGTCTATTAA
CGAACAAAGTTCTTTATGCCTCAAATTAGTACCCTTGCCAGTATAGTGGT
TATTTTCCCTCTTTCTGCCCATCTCCCCCCTGGGAATTCGGGGAATGGAG
GGGGAGTGGGGTTTGGATCCAAAAAAGGGGGGGAAAAACCAAACAGTTTT
GGGGTTTTTGGGGGGGGTTTTCCCCCCCCTCCTATTTGGGGGTTTTTCCG
GGGGTCTTCCCCAAAGAATTTGGGGGGGGGTTTGGACAACCCAAATTTTC
CCTGGTCCCCCCCCCGAGG
back to top