EY679873

Overview
NameEY679873
Unique NameEY679873
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10948 contig Csv1_Contig10948:729..1393. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY679873 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.330e-60
Identity = 115/145 (79.31%), Postives = 129/145 (88.97%), Query Frame = 2
Query:    2 ISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 436
            ISTSP K+ EAL+HLGADSFL SRD DQ+Q A+GT+DGIIDTVSA HP+LPL+GLL S GKLV+VGAP+KPLELPV  L+MGRK V+GS  GGMKETQEMIDFAA+HNITADIEVI +DY+NTAMERL KADVRYRFVIDI NTL
Sbjct:  211 ISTSPKKEEEALKHLGADSFLVSRDQDQMQAAIGTMDGIIDTVSAQHPLLPLIGLLNSHGKLVMVGAPEKPLELPVFPLLMGRKMVAGSGIGGMKETQEMIDFAARHNITADIEVIPIDYLNTAMERLVKADVRYRFVIDIGNTL 355          
BLAST of EY679873 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.157e-59
Identity = 112/147 (76.19%), Postives = 129/147 (87.76%), Query Frame = 2
Query:    2 ISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAA 442
            ISTSP+KK EA+  LGADSF+ SR+P+Q+Q AMGTLDGIIDTVSA HP+LPLLGLLKSQGK+++VG PDKPLELPV  L+ GRK ++GS  GGMKETQEMIDFAAKH+I +DIEV+ MDYVNTAMERL K DVRYRFVID+ANTL A
Sbjct:  214 ISTSPNKKDEAVNRLGADSFVVSREPEQMQSAMGTLDGIIDTVSAAHPLLPLLGLLKSQGKMIMVGVPDKPLELPVFPLLQGRKILAGSCIGGMKETQEMIDFAAKHDIKSDIEVVPMDYVNTAMERLLKGDVRYRFVIDVANTLKA 360          
BLAST of EY679873 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.150e-57
Identity = 109/145 (75.17%), Postives = 127/145 (87.59%), Query Frame = 2
Query:    2 ISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 436
            ISTS SKK EALE LGAD FL S D DQ+Q A GTL GIIDTVSA+HP++PLLGLLK  GKLV+VGAP+KPLELPV  L+MGRK ++GS+ GG+KETQEM+DFAA+HNITAD+EVI +DYVNTAMERL K+DVRYRFVID+ANT+
Sbjct:  190 ISTSESKKQEALEKLGADEFLVSSDSDQMQAATGTLHGIIDTVSALHPVVPLLGLLKVNGKLVMVGAPEKPLELPVFPLLMGRKVLAGSNIGGLKETQEMLDFAAQHNITADVEVIPVDYVNTAMERLVKSDVRYRFVIDVANTI 334          
BLAST of EY679873 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 2.666e-56
Identity = 109/148 (73.65%), Postives = 126/148 (85.14%), Query Frame = 2
Query:    2 ISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAAT 445
            ISTS  K+ EA+  LGAD+FL SRDP Q++ AMGT+DGIIDTVSA HP+LPLLGLLK++GKLV+VGAP +PLELPV  LI GRK V GS  GG+KETQEM+D A KHNITADIE+IS DYVNTAMERLAKADV+YRFVID+ANT+  T
Sbjct:  209 ISTSERKRDEAVTRLGADAFLVSRDPKQMKDAMGTMDGIIDTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRKMVVGSMVGGIKETQEMVDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVANTMKPT 356          
BLAST of EY679873 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.257e-55
Identity = 109/145 (75.17%), Postives = 123/145 (84.83%), Query Frame = 2
Query:    2 ISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 436
            ISTS  K+ EA+  LGAD+FL SRDP Q++ AMGT+DGIIDTVSA H +LPLLGLLK +GKLV+VGAP+KPLELPV+ LI  RK V GS  GG+KETQEMID A KHNITADIE+IS DYVNTAMERL KADVRYRFVID+ANTL
Sbjct:  209 ISTSEKKRDEAINRLGADAFLVSRDPKQIKDAMGTMDGIIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQEMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANTL 353          
BLAST of EY679873 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.759e-53
Identity = 100/145 (68.97%), Postives = 122/145 (84.14%), Query Frame = 2
Query:    2 ISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 436
            ISTS SKK EA++HLG D F+ S DP Q+Q A+GTLDGIIDTVSA HPI+PLL LLK  GKL++VG PDKPL+LPV  LI GR+T++GS  GG+KETQEMIDFAAK+NI AD+EVI +DY+NTAM+RL K+DV+YRFVID+  +L
Sbjct:  213 ISTSLSKKEEAMQHLGVDEFVVSTDPQQMQAAVGTLDGIIDTVSAPHPIVPLLSLLKPHGKLIVVGLPDKPLQLPVFPLIQGRRTIAGSGIGGLKETQEMIDFAAKNNIVADVEVIPIDYINTAMDRLLKSDVKYRFVIDVEKSL 357          
BLAST of EY679873 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.788e-52
Identity = 101/149 (67.79%), Postives = 125/149 (83.89%), Query Frame = 2
Query:    2 ISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAATK 448
            +S++  K  +AL+ LGAD FL S D DQ++ AMGT+DGIIDTVSA H I PL+GLLKS GKLVL+GA +KP ++   SLI+GRK+++GS  GGM+ETQEMIDFAA+H I A+IE+ISMDYVNTAM+RLAK DVRYRFVIDI+NTLAAT+
Sbjct:  214 VSSTTGKSKDALDTLGADGFLVSTDEDQMKAAMGTMDGIIDTVSASHSISPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRKSIAGSGIGGMQETQEMIDFAAEHGIKAEIEIISMDYVNTAMDRLAKGDVRYRFVIDISNTLAATR 362          
BLAST of EY679873 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.051e-52
Identity = 104/149 (69.80%), Postives = 124/149 (83.22%), Query Frame = 2
Query:    2 ISTSP-SKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAAT 445
            ISTSP +KK EA+++LGADSFL SRDPDQ++    TLDGIIDTVSA H I+PL+GLLKS GKLVL+GA +KPLELP   LI+GRK V G+  GG+KETQEMIDF+ KHN+  +IEV+ MDYVN AM+RLAKADV+YRFVID+ANTL  T
Sbjct:  214 ISTSPPTKKEEAIKNLGADSFLVSRDPDQMEAPKETLDGIIDTVSADHSIVPLIGLLKSHGKLVLIGAIEKPLELPPFPLILGRKLVGGTLVGGLKETQEMIDFSPKHNVKPEIEVVPMDYVNIAMQRLAKADVKYRFVIDVANTLKPT 362          
BLAST of EY679873 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 3.984e-52
Identity = 98/146 (67.12%), Postives = 122/146 (83.56%), Query Frame = 2
Query:    2 ISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLA 439
            IS+S +K  EA+ HLGADSFL + DP +++ A+GT+D IIDT+SAVH + PLLGLLK  GKL+ +G P+KPLELP+  L++GRK V GS  GGMKETQEM+DF AKHNITADIE+I MD +NTAMERLAK+DVRYRFVID+AN+L+
Sbjct:  213 ISSSSTKAEEAINHLGADSFLVTTDPQKMKAAIGTMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGGSDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANSLS 358          
BLAST of EY679873 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.876e-52
Identity = 98/147 (66.67%), Postives = 122/147 (82.99%), Query Frame = 2
Query:    2 ISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAA 442
            ISTSP+K+TEA++ LGADSFL S+DP++++ AMGT+D IIDT+SA H ++PLLGLLK  GKLV VG P KPLEL V  L+ GRK + GS+ GGMKETQEM+DF  KHNITADIE+I M  +NTAMERL KADV+YRFVID+AN+ ++
Sbjct:  212 ISTSPNKETEAIDKLGADSFLVSKDPEKMKAAMGTMDYIIDTISAAHSLMPLLGLLKLNGKLVTVGLPSKPLELSVFPLVAGRKLIGGSNIGGMKETQEMLDFCGKHNITADIELIKMHEINTAMERLHKADVKYRFVIDVANSFSS 358          
The following BLAST results are available for this feature:
BLAST of EY679873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
MTDH_FRAAN2.330e-6079.31Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
MTDH_MESCR1.157e-5976.19Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
MTDH_PETCR3.150e-5775.17Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
CADH7_ARATH2.666e-5673.65Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
CADH8_ARATH2.257e-5575.17Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
GEDH1_OCIBA2.759e-5368.97Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
CADH6_ARATH1.788e-5267.79Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
MTDH3_STYHU3.051e-5269.80Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
CADH9_ARATH3.984e-5267.12Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
MTDH_MEDSA8.876e-5266.67Probable mannitol dehydrogenase OS=Medicago sativa... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-A01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679873 ID=EY679873; Name=EY679873; organism=Citrus sinensis; type=EST; length=666bp
AATTAGCACCTCTCCAAGCAAGAAGACTGAAGCTCTTGAACATCTTGGCG
CTGATTCATTTTTGAATAGCCGTGACCCTGACCAATTGCAGGGTGCCATG
GGCACATTGGATGGTATTATTGACACGGTGTCCGCTGTGCACCCCATTTT
GCCATTGCTCGGTCTATTAAAGTCCCAGGGCAAGCTTGTTCTGGTTGGTG
CTCCGGACAAGCCACTCGAGCTACCTGTGATTTCCTTAATTATGGGGAGG
AAGACGGTGTCAGGGAGCAGCACTGGGGGAATGAAAGAGACGCAAGAGAT
GATTGATTTTGCAGCAAAACACAATATAACAGCTGACATTGAGGTTATTT
CGATGGATTATGTCAATACGGCAATGGAGCGGCTCGCCAAGGCTGATGTT
CGGTATCGATTTGTCATTGATATTGCAAACACCTTGGCCGCCACCAAACC
TTGAAGAATCAGAATCAGAATCAGATTGGTGTCTTCAATTCACAACTTTG
TTCCATGATCCACTTTGCTATATGTAATGCTCCCTCGATCATTACACTCT
TTTAGCGCTTAAATTACTTTTAATTTCCAGTTTACTCACCCTAATTATGT
CGTGATTGCCAAAAAACTATAAATGTTAATGAAAATAAAACATTGTTCAT
ATAAAAAAAAAAAAAA
back to top