EY679870
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679870 vs. ExPASy Swiss-Prot
Match: CRYD_SOLLC (Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum GN=CRYD PE=3 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 2.764e-59 Identity = 113/193 (58.55%), Postives = 146/193 (75.65%), Query Frame = 2 Query: 77 NIQQKVIPHCQVIPGADSREINHIVEETFGRYTSKAL-KRNGKGVAIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVERLARKNLHQVV*SSQ----SNEKSPNPPQLKLIWGN 640 ++ + P Q +PG E+ + E+TF RY S L KR GKGVAIVWFRNDLRVLDNEALL+AW SSE +LPVYCVDPR TT++FG PKTGALRAQF+IECL DL++NL+ RGL+LLI+HGKPE+I+PSLAK++ AH VYA KETCSEE+ VE++ +NL ++V S ++ S N +L+L+WG+ Sbjct: 35 SLTARTTPTVQNVPGLTPEEMERVCEQTFQRYESGGLGKRKGKGVAIVWFRNDLRVLDNEALLRAWVSSEAILPVYCVDPRLFGTTHYFGMPKTGALRAQFIIECLNDLKRNLVKRGLDLLIQHGKPEDIVPSLAKAYKAHTVYAHKETCSEEVKVEKMVTRNLQKLVSPSSGGIGNDPGSGNTTKLELVWGS 227
BLAST of EY679870 vs. ExPASy Swiss-Prot
Match: CRYD_ORYSJ (Cryptochrome DASH, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=CRYD PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.587e-57 Identity = 113/179 (63.13%), Postives = 139/179 (77.65%), Query Frame = 2 Query: 113 IPGADSREINHIVEETFGRYTSKALKRNGKG-VAIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQ-TTYHFGFPKTGALRAQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVERLARKNLHQVV--*SSQSNEKSPNPPQLKLIWG 637 +P + E +E F RYTS +++R+G G VAIVWFRNDLRVLDNEA+++AW +S+ VLPVYCVDPR S +T++FGFPKTGALRAQFLIECL DL++NL +GL+LLIRHGKPE+I+PS+AK+ AH VYA KETCSEEL VE L RK L QVV SN+K P P+L+LIWG Sbjct: 53 VPSLSADEAGAAADEAFLRYTSPSMRRSGGGGVAIVWFRNDLRVLDNEAVVRAWAASDAVLPVYCVDPRISAGSTHYFGFPKTGALRAQFLIECLEDLKRNLTKQGLDLLIRHGKPEDILPSIAKAVTAHTVYAHKETCSEELLVEHLVRKGLEQVVIPQGGASNQKKPRNPKLQLIWG 231
BLAST of EY679870 vs. ExPASy Swiss-Prot
Match: CRYD_ARATH (Cryptochrome DASH, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=CRYD PE=1 SV=2) HSP 1 Score: 214.927 bits (546), Expect = 5.395e-55 Identity = 109/187 (58.29%), Postives = 133/187 (71.12%), Query Frame = 2 Query: 89 KVIPHCQVIPGADSREINHIVEETFGRY---TSKALKRNGKGVAIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVERLARKNLHQVV*SSQSNEKSPNPPQLKLIWGN 640 K+ H +P EI+ + +TF RY +S ++KR GKGV I+WFRNDLRVLDN+AL KAW SS+ +LPVYC+DPR TT+ F FPKTGALR FL+ECL DLRKNLM RGLNLLIR GKPEEI+PSLAK FGA V+A KETCSEE++VERL + L +V N +L+LIWG+ Sbjct: 43 KMNDHIHRVPALTEEEIDSVAIKTFERYALPSSSSVKRKGKGVTILWFRNDLRVLDNDALYKAWSSSDTILPVYCLDPRLFHTTHFFNFPKTGALRGGFLMECLVDLRKNLMKRGLNLLIRSGKPEEILPSLAKDFGARTVFAHKETCSEEVDVERLVNQGLKRV----------GNSTKLELIWGS 219
BLAST of EY679870 vs. ExPASy Swiss-Prot
Match: PHR2_ARATH (Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana GN=PHR2 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 1.385e-26 Identity = 66/124 (53.23%), Postives = 81/124 (65.32%), Query Frame = 2 Query: 173 TSKALKRNGKGVAIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVE 544 ++ AL+R A+VWFRNDLRV DNE L A D VLPVYC DPR + GF KTG RAQFLIE +++LRKNL RG NL++R GKPE ++ LAK GA AVYA +E +E+ E Sbjct: 109 SAAALRR----AAVVWFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSS-GFDKTGPFRAQFLIESVSELRKNLQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHREVSHDEVKAE 227
BLAST of EY679870 vs. ExPASy Swiss-Prot
Match: CRYD_XENLA (Cryptochrome DASH OS=Xenopus laevis GN=cry-dash PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.529e-22 Identity = 55/119 (46.22%), Postives = 74/119 (62.18%), Query Frame = 2 Query: 206 VAIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFG-AHAVYAQKETCSEELNVERLARK 559 V I RNDLR+ DNE L A +++ ++P+YC DPRH T++F FPKTG R +FL+E + DLR L +G NLL+R GKPEE+I L K G AV +E EE +VE ++ Sbjct: 7 VIICLLRNDLRLHDNEVLHWAHRNADQIVPLYCFDPRHYVGTHYFNFPKTGPHRLKFLLESVRDLRITLKKKGSNLLLRRGKPEEVIEDLVKQLGNVSAVTLHEEATKEETDVESAVKQ 125
BLAST of EY679870 vs. ExPASy Swiss-Prot
Match: CRYD_DANRE (Cryptochrome DASH OS=Danio rerio GN=cry-dash PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 1.027e-21 Identity = 52/112 (46.43%), Postives = 71/112 (63.39%), Query Frame = 2 Query: 212 IVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYA-QKETCSEELNVE 544 I RNDLR+ DNE A ++E ++P+YC DPRH Q TYH+ FPKTG R +FL++ + DLR L G LL+R GKPE+++ L K G+ + A +E SEE +VE Sbjct: 8 ICLLRNDLRLHDNEVFHWAQRNAEHIIPLYCFDPRHYQGTYHYNFPKTGPFRLRFLLDSVKDLRALLKKHGSTLLVRQGKPEDVVCELIKQLGSVSTVAFHEEVASEEKSVE 119
BLAST of EY679870 vs. ExPASy Swiss-Prot
Match: CRYD_GLOVI (Cryptochrome DASH OS=Gloeobacter violaceus GN=cry PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.341e-21 Identity = 55/112 (49.11%), Postives = 71/112 (63.39%), Query Frame = 2 Query: 212 IVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVER 547 +VW+RNDLRV D+E L A + V+ +YC DPR FGF KTG RA+FL+E +ADLR++L G +LL+R G PEE+IP+L AV+ E SEEL VER Sbjct: 7 LVWYRNDLRVHDHEPLTSALHKNARVVALYCFDPRQFGKA-PFGFEKTGPFRARFLLESVADLRRSLRQLGSDLLVRRGHPEEVIPALVSELEIAAVHYHGEVTSEELVVER 117
BLAST of EY679870 vs. ExPASy Swiss-Prot
Match: CRYD_NATPD (Cryptochrome DASH OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=cry PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.693e-21 Identity = 54/109 (49.54%), Postives = 75/109 (68.81%), Query Frame = 2 Query: 209 AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDP-RHSQTTYHFGFPKTGALRAQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEE 532 A+VWFR+DLRV DN L A ++E V+PVY DP R++++ Y G PKTG RA F + +ADLR +L +RG +LL+R G+P ++P LA+ GA AVYAQ + +EE Sbjct: 4 AVVWFRDDLRVTDNPTLADAVAAAETVIPVYTFDPDRYTESEY--GPPKTGGHRAVFRRQAVADLRASLRDRGGDLLVRSGRPATVVPELAQRAGADAVYAQTKPATEE 110
BLAST of EY679870 vs. ExPASy Swiss-Prot
Match: CRYD_SYNY3 (Cryptochrome DASH OS=Synechocystis sp. (strain PCC 6803) GN=cry PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 1.255e-19 Identity = 52/118 (44.07%), Postives = 70/118 (59.32%), Query Frame = 2 Query: 212 IVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEELNVERLARKNL 565 +VWFRNDLR+ D+E L +A S + VYC DPR T H GF KTG R+ FL + + +L ++L G LL+ G PE++IP +AK A +Y +E EEL+VER K L Sbjct: 9 LVWFRNDLRLHDHEPLHRALKSGLAITAVYCYDPRQFAQT-HQGFAKTGPWRSNFLQQSVQNLAESLQKVGNKLLVTTGLPEQVIPQIAKQINAKTIYYHREVTQEELDVERNLVKQL 125
BLAST of EY679870 vs. ExPASy Swiss-Prot
Match: CRYD_RHOBA (Cryptochrome DASH OS=Rhodopirellula baltica GN=cry PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 5.274e-18 Identity = 48/108 (44.44%), Postives = 68/108 (62.96%), Query Frame = 2 Query: 209 AIVWFRNDLRVLDNEALLKAWDSSEMVLPVYCVDPRHSQTTYHFGFPKTGALRAQFLIECLADLRKNLMNRGLNLLIRHGKPEEIIPSLAKSFGAHAVYAQKETCSEE 532 A+VWFRNDLR +D+E L+A +++ V+C+DPR +TT GF +TG RA+FLIE L DLR L + G L++R G+PE ++ L S AV+ E +EE Sbjct: 4 ALVWFRNDLRTIDHEPFLRA-STADRCFAVHCIDPRQFETT-ELGFQRTGPFRARFLIENLTDLRSRLRSLGGELIVRVGRPETVLQHLLPSLAIDAVHFHHEPRTEE 109 The following BLAST results are available for this feature:
BLAST of EY679870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY679870 ID=EY679870; Name=EY679870; organism=Citrus sinensis; type=EST; length=956bpback to top |