EY679860
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679860 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 357.066 bits (915), Expect = 8.352e-98 Identity = 186/260 (71.54%), Postives = 201/260 (77.31%), Query Frame = 2 Query: 5 SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG*XNCWEGRFGEVTDPLYPXXXXXXXXXXX*PGRLFAELKVKEIKNGRLAMFSLVGFSFHSANCPGQGTVKKIGQHFGQPW*KKRPGPTHTNFVPEK 778 SF GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEG G GEV DPLYP P FAELKVKEIKNGRLAMFS+ GF F A G+G ++ + H P TNFVP K Sbjct: 12 SFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG-YRVAGGPLGEVVDPLYPGGSFDPLGLAEDP-EAFAELKVKEIKNGRLAMFSMFGF-FVQAIVTGKGPLENLADHLADPV-NNNAWAYATNFVPGK 267
BLAST of EY679860 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 356.295 bits (913), Expect = 1.425e-97 Identity = 186/261 (71.26%), Postives = 201/261 (77.01%), Query Frame = 2 Query: 2 SSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG*XNCWEGRFGEVTDPLYPXXXXXXXXXXX*PGRLFAELKVKEIKNGRLAMFSLVGFSFHSANCPGQGTVKKIGQHFGQPW*KKRPGPTHTNFVPEK 778 S F GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEG G GEV DPLYP P FAELKVKEIKNGRLAMFS+ GF F A G+G ++ + H P TNFVP K Sbjct: 10 SPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG-YRVAGGPLGEVVDPLYPGGSFDPLGLAEDP-EAFAELKVKEIKNGRLAMFSMFGF-FVQAIVTGKGPLENLADHLADPV-NNNAWSYATNFVPGK 266
BLAST of EY679860 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 355.91 bits (912), Expect = 1.861e-97 Identity = 185/261 (70.88%), Postives = 201/261 (77.01%), Query Frame = 2 Query: 2 SSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG*XNCWEGRFGEVTDPLYPXXXXXXXXXXX*PGRLFAELKVKEIKNGRLAMFSLVGFSFHSANCPGQGTVKKIGQHFGQPW*KKRPGPTHTNFVPEK 778 S+F GKAV L+PS +E++ GR++MRKT +K+ SSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEG G GEV DPLYP P FAELKVKEIKNGRLAMFS+ GF F A G+G ++ + H P TNFVP K Sbjct: 11 STFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG-YRIAGGPLGEVVDPLYPGGSFDPLGLADDP-EAFAELKVKEIKNGRLAMFSMFGF-FVQAIVTGKGPLENLADHLADPV-NNNAWAFATNFVPGK 267
BLAST of EY679860 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 354.755 bits (909), Expect = 4.145e-97 Identity = 183/258 (70.93%), Postives = 198/258 (76.74%), Query Frame = 2 Query: 5 SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG*XNCWEGRFGEVTDPLYPXXXXXXXXXXX*PGRLFAELKVKEIKNGRLAMFSLVGFSFHSANCPGQGTVKKIGQHFGQPW*KKRPGPTHTNFVPEK 778 SF G+AV L+PS E++ GR+SMRKT +K V+S SPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEG G GEV DPLYP P FAELKVKEIKNGRLAMFS+ GF F A G+G ++ + H P TNFVP K Sbjct: 12 SFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEG-YRVAGGPLGEVVDPLYPGGSFDPLGLAEDP-EAFAELKVKEIKNGRLAMFSMFGF-FVQAIVTGKGPLENLADHLADPV-NNNAWAYATNFVPGK 265
BLAST of EY679860 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 354.369 bits (908), Expect = 5.414e-97 Identity = 184/258 (71.32%), Postives = 197/258 (76.36%), Query Frame = 2 Query: 5 SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG*XNCWEGRFGEVTDPLYPXXXXXXXXXXX*PGRLFAELKVKEIKNGRLAMFSLVGFSFHSANCPGQGTVKKIGQHFGQPW*KKRPGPTHTNFVPEK 778 SF G+AV L+PS +E+S GRI+MRK +KS S SPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEG G GEV DPLYP P FAELKVKEIKNGRLAMFS+ GF F A G+G ++ + H P TNFVP K Sbjct: 12 SFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG-YRIAGGPLGEVVDPLYPGGSFDPLGLAEDP-EAFAELKVKEIKNGRLAMFSMFGF-FVQAIVTGKGPLENLADHLADPV-NNNAWAFATNFVPGK 265
BLAST of EY679860 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 353.599 bits (906), Expect = 9.235e-97 Identity = 185/261 (70.88%), Postives = 201/261 (77.01%), Query Frame = 2 Query: 2 SSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG*XNCWEGRFGEVTDPLYPXXXXXXXXXXX*PGRLFAELKVKEIKNGRLAMFSLVGFSFHSANCPGQGTVKKIGQHFGQPW*KKRPGPTHTNFVPEK 778 S F GKAV L+PS +E++ G+++MRKT +K+ VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEG E GEV DPLYP P FAELKVKEIKNGRLAMFS+ GF F A G+G ++ + H P TNFVP K Sbjct: 10 SPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGE-PLGEVVDPLYPGGSFDPLGLAEDP-EAFAELKVKEIKNGRLAMFSMFGF-FVQALVTGKGPLENLADHLADPV-NNNAWSYATNFVPGK 266
BLAST of EY679860 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 353.214 bits (905), Expect = 1.206e-96 Identity = 184/261 (70.50%), Postives = 201/261 (77.01%), Query Frame = 2 Query: 2 SSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG*XNCWEGRFGEVTDPLYPXXXXXXXXXXX*PGRLFAELKVKEIKNGRLAMFSLVGFSFHSANCPGQGTVKKIGQHFGQPW*KKRPGPTHTNFVPEK 778 SSF GKAV L+PS +E++ G+++MRKT +K+ +SSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEG G GEV DPLYP P FAELKVK IKNGRLAMFS+ GF F A G+G ++ + H P TNFVP K Sbjct: 11 SSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG-YRVAGGPLGEVVDPLYPGGSFDPLGLAEDP-EAFAELKVKHIKNGRLAMFSMFGF-FVQAIVTGKGPLENLADHLADPV-NNNAWSYATNFVPGK 267
BLAST of EY679860 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 350.517 bits (898), Expect = 7.818e-96 Identity = 180/258 (69.77%), Postives = 197/258 (76.36%), Query Frame = 2 Query: 5 SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG*XNCWEGRFGEVTDPLYPXXXXXXXXXXX*PGRLFAELKVKEIKNGRLAMFSLVGFSFHSANCPGQGTVKKIGQHFGQPW*KKRPGPTHTNFVPEK 778 + G+AV L+P+ E+ + +MRKT SKSVSSGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEG G GEVTDP+YP P FAELKVKE+KNGRLAMFS+ GF F A G+G ++ + H P TNFVP K Sbjct: 2 TLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG-YRIAGGPLGEVTDPIYPGGSFDPLGLADDP-EAFAELKVKELKNGRLAMFSMFGF-FVQAIVTGKGPLENLADHLADPV-NNNAWAYATNFVPGK 255
BLAST of EY679860 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 350.132 bits (897), Expect = 1.021e-95 Identity = 183/261 (70.11%), Postives = 200/261 (76.63%), Query Frame = 2 Query: 2 SSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG*XNCWEGRFGEVTDPLYPXXXXXXXXXXX*PGRLFAELKVKEIKNGRLAMFSLVGFSFHSANCPGQGTVKKIGQHFGQPW*KKRPGPTHTNFVPEK 778 SSF GKAV L+PS +E++ G+++MRKT SK+ VSS SPWYG +RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK G+QIFS+GGLDYLGNPSL+HAQSILAIWACQVVLMGAVEG E GEV DPLYP P FAELKVKEIKNGRLAMFS+ GF F A G+G ++ + H P TNFVP K Sbjct: 11 SSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGE-PLGEVVDPLYPGGSFDPLGLAEDP-EAFAELKVKEIKNGRLAMFSMFGF-FVQAIVTGKGPLENLADHLADPV-NNNAWAYATNFVPGK 267
BLAST of EY679860 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 349.747 bits (896), Expect = 1.333e-95 Identity = 184/260 (70.77%), Postives = 198/260 (76.15%), Query Frame = 2 Query: 5 SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG*XNCWEGRFGEVTDPLYPXXXXXXXXXXX*PGRLFAELKVKEIKNGRLAMFSLVGFSFHSANCPGQGTVKKIGQHFGQPW*KKRPGPTHTNFVPEK 778 SF G AV L+PS +E++ G+ MRKT +K+ VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGA+EG G GEVTDPLYP P FAELKVKEIKNGRLAMFS+ GF F A G+G + + H P TNFVP K Sbjct: 12 SFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEG-YRVAGGPLGEVTDPLYPGGSFDPLGLADDP-EAFAELKVKEIKNGRLAMFSMFGF-FVQAIVTGKGPLDNLVDHLADPV-NNNAWAYATNFVPGK 267 The following BLAST results are available for this feature:
BLAST of EY679860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679860 ID=EY679860; Name=EY679860; organism=Citrus sinensis; type=EST; length=927bpback to top |