EY679848

Overview
NameEY679848
Unique NameEY679848
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7740 contig Csv1_Contig7740:578..1551. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY679848 vs. ExPASy Swiss-Prot
Match: YOOF_SCHPO (Uncharacterized hydroxylase C887.15c OS=Schizosaccharomyces pombe GN=SPBC887.15c PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 7.544e-36
Identity = 66/119 (55.46%), Postives = 86/119 (72.27%), Query Frame = 2
Query:   17 NKFLSRHIHSQHHRLVVPYAIGALYNHPLEGLLLDTLGGALSFLVSGMTARTAVIFFCFAVIKTVDDHSGLWLPGNIFHLFFQNNTAYHDVHHQLQGLKYNYSQPFFSIWDRLLGTHMP 373
            NK L   IH+ HHRL VPYA+GALYNHP EGL+LDT G  +++L +G++ + AVIFF  + +KTVDDH G   P +   +FF NN  YHD+HHQ  G + N+SQPFF+ WD +LGT+MP
Sbjct:  155 NKKLYNMIHAHHHRLQVPYAMGALYNHPFEGLILDTFGAGVAYLAAGLSPQQAVIFFTLSTLKTVDDHCGYVFPYDPLQMFFANNARYHDLHHQPYGFQKNFSQPFFTFWDHVLGTYMP 273          
BLAST of EY679848 vs. ExPASy Swiss-Prot
Match: SUR2_YEAST (Sphingolipid C4-hydroxylase SUR2 OS=Saccharomyces cerevisiae GN=SUR2 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 9.543e-31
Identity = 66/136 (48.53%), Postives = 84/136 (61.76%), Query Frame = 2
Query:   17 NKFLSRHIHSQHHRLVVPYAIGALYNHPLEGLLLDTLGGALSFLVSGMTARTAVIFFCFAVIKTVDDHSGLWLPGNIFHLFFQNNTAYHDVHHQLQGLKYNYSQPFFSIWDRLLGTHMPYHLVKLPEGGFEARLKK 424
            NK L +  HS HH L VPYA GAL+N+P+EG LLDTLG  ++  ++ +T R  +I F FA +KTVDDH G  LP + F   F NN  YHD+HHQ  G+K N++QPFF+ WD L  T+           GFE   KK
Sbjct:  182 NKTLYKWFHSVHHELYVPYAYGALFNNPVEGFLLDTLGTGIAMTLTHLTHREQIILFTFATMKTVDDHCGYALPLDPFQWLFPNNAVYHDIHHQQFGIKTNFAQPFFTFWDNLFQTNFK---------GFEEYQKK 308          
BLAST of EY679848 vs. ExPASy Swiss-Prot
Match: ERG25_CHICK (C-4 methylsterol oxidase OS=Gallus gallus GN=SC4MOL PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.431e-11
Identity = 47/145 (32.41%), Postives = 71/145 (48.97%), Query Frame = 2
Query:    2 HASDQNKFLSRHIHSQHHRLVVPYAIGALYNHPLEGLLLDTLGGALSFLVSGMTARTAVIFFCFAV---IKTVDDHSGLWLPGNIFHLF-FQNNTAYHDVHHQLQGLKYNYSQPFFSIWDRLLGTHMPYHLVKLPEGGFEARLKK 424
            H    +K + ++IH  HH  V P+ + A Y HPLE L+L    GA  F+   +     V+ + + +   ++T+D HSG  +P N  HL  F     +HD HH       NY+   F+ WDR+ GT   +   K  E   + R+KK
Sbjct:  157 HRLLHHKRIYKYIHKVHHEFVSPFGMQAEYAHPLETLIL----GAGFFIGIVVFCNHVVLLWAWVICRLMETIDVHSGYDIPLNPLHLVPFYAGARFHDFHH--MNFIGNYAST-FTWWDRIFGTDSQFIAYKEKEKKQQLRMKK 294          
The following BLAST results are available for this feature:
BLAST of EY679848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
YOOF_SCHPO7.544e-3655.46Uncharacterized hydroxylase C887.15c OS=Schizosacc... [more]
SUR2_YEAST9.543e-3148.53Sphingolipid C4-hydroxylase SUR2 OS=Saccharomyces ... [more]
ERG25_CHICK6.431e-1132.41C-4 methylsterol oxidase OS=Gallus gallus GN=SC4MO... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-004-F09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679848 ID=EY679848; Name=EY679848; organism=Citrus sinensis; type=EST; length=973bp
CCACGCGTCCGATCAGAACAAATTCTTGTCTCGTCATATCCACTCTCAGC
ACCATAGGCTGGTTGTTCCTTATGCAATCGGCGCCCTTTACAATCACCCT
CTTGAGGGACTTTTGCTCGACACTTTGGGTGGAGCCCTCTCTTTTCTTGT
CTCGGGAATGACTGCACGAACAGCCGTGATATTTTTCTGCTTTGCTGTGA
TTAAAACTGTTGATGATCACTCTGGGCTTTGGTTGCCTGGCAATATCTTC
CACTTGTTCTTCCAGAACAACACCGCTTATCACGATGTCCACCATCAACT
TCAGGGCTTGAAGTACAACTATTCTCAGCCATTCTTCTCAATATGGGATA
GACTTCTTGGAACTCACATGCCTTACCATCTAGTAAAGCTACCTGAAGGA
GGTTTTGAGGCTCGGCTAAAGAAAGACTAGATGCTATTAAGACAATTTGA
CTGTCTCATTTTAGGCTCACTTTGTACGAGAAGATTTTTTGGTCAAGGTT
GTGCCATTCTTGGGAAGTTGAACTAAAGTTGTTTGTTTGGGGCTTTAAAC
TCTAGGGTTCTAGCAGGAGGTTATCTTGTTGCTTGGGATTGTTCTTTAAG
TGGTTGCGGTAATTTTGCAGAACAACCATATTACTTTAAAAATTGTTCCG
GTTTTGGTTATCCATCCGCGTGGTAAAAATAACCTCCTTATTTCATGGTA
CAATTCGGATTTTCGGGGCTGGTTGATATTGGAGGACCGGGATGAATTTT
TAAAATTGGTGTGGGCCCACCAGGGGTGGGGATTTTTTTTGCCGGAATGG
GGGGAAACGACAATGAGAAAACAAGGACACAGAAAAAAGAAAACAGCAAA
CATGAGAAAGCACCACGAAAAAAAACATAATAACGAAATTGACAAAAAAG
TTAGAGGGGGGGGGGGGGGCCGCTCCAAAACAGAAATCACAGACTCATAC
CTGTCCGGATGTGGGCGGGGGAC
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