EY679844

Overview
NameEY679844
Unique NameEY679844
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length994
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY679844_ssr643 microsatellite EY679844_ssr643:643..654. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY679844 vs. ExPASy Swiss-Prot
Match: CO058_HUMAN (UPF0580 protein C15orf58 OS=Homo sapiens GN=C15orf58 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.336e-19
Identity = 60/175 (34.29%), Postives = 90/175 (51.43%), Query Frame = 2
Query:    2 EEVLFQFEASEDGEVQFH----PSAPIDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF---EGGNSLEDLSNTVSDACICLQENNIPYNVLI 505
            + V F F     GEV F     P  P  +     +V INVSP+E+GHVLL+P     LPQR+   +    +     + +P FR+G+NSLG  A++NHLH   YY+A   P+E+AP++ +     G  +  L + P  G +F     G  LE L + V  A   L ++ I +N+ +
Sbjct:  120 DPVQFNFNKIRPGEVLFRLHREPDLPGTLLQEDILVVINVSPLEWGHVLLVPEPARQLPQRLLPGALRAGIEAVLLSLHPGFRVGFNSLGGLASVNHLHLHGYYLAHRLPVEQAPSEPL---DPGGHLHLLQDLPAPGFLFYTRGPGTDLESLISRVCRATDYLTDHEIAHNLFV 291          
BLAST of EY679844 vs. ExPASy Swiss-Prot
Match: CO058_MOUSE (UPF0580 protein C15orf58 homolog OS=Mus musculus PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 5.079e-19
Identity = 63/172 (36.63%), Postives = 86/172 (50.00%), Query Frame = 2
Query:   14 FQFEASEDGEVQFH----PSAPIDVENSPSV-VAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF---EGGNSLEDLSNTVSDACICLQENNIPYNVLI 505
            F F     GEV F     P  P   +    V V INVSP+E+GHVLL+P   + LPQR+      + L     + +P FR+G+NSLG  A++NHLH   YY+A P P+E AP+  +   G    I  L   P  G +F     G  LE L + V  A   L +  I +N+ +
Sbjct:  124 FNFNKIRPGEVLFRMQREPKGPATPKQEDDVLVVINVSPLEWGHVLLVPAPAQGLPQRLLPGVLRVGLEAVLLSLHPGFRVGFNSLGGLASVNHLHLHCYYLAHPLPVEGAPSTPLDPKGC---IHLLQALPAPGFLFYTSGPGPDLEVLISRVCRATDYLSDREIAHNLFV 292          
BLAST of EY679844 vs. ExPASy Swiss-Prot
Match: CO058_BOVIN (UPF0580 protein C15orf58 homolog OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.520e-18
Identity = 59/171 (34.50%), Postives = 86/171 (50.29%), Query Frame = 2
Query:   14 FQFEASEDGEVQFHPSAPID----VENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF---EGGNSLEDLSNTVSDACICLQENNIPYNVLI 505
            F F     GEV F      D    V+    +V INVSP+E+GHVLL+P     LPQR+   +    +     + +P FR+G+NSLG  A++NHLH   YY+A   P+E AP++ +   G   ++  L   P  G +F     G  LE L + V  A   L +  I +N+ +
Sbjct:  124 FNFNQIRPGEVLFRLHRKQDCSGTVQQEDILVVINVSPLEWGHVLLVPEPARGLPQRLLPGALRAGVEAVLLSSHPGFRVGFNSLGGLASVNHLHLHGYYLAHRLPVEGAPSEPLDPRG---RLHVLQALPAPGFLFYTSRPGPDLEALISRVCRATDYLTDCEIAHNLFV 291          
BLAST of EY679844 vs. ExPASy Swiss-Prot
Match: CO058_MACFA (UPF0580 protein C15orf58 homolog OS=Macaca fascicularis GN=QflA-20034 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.292e-18
Identity = 58/171 (33.92%), Postives = 87/171 (50.88%), Query Frame = 2
Query:   14 FQFEASEDGEVQFH----PSAPIDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF---EGGNSLEDLSNTVSDACICLQENNIPYNVLI 505
            F F   + GEV +     P  P  +     +V INVSP+E+GHVLL+P     LPQR+   +    +     + +P FR+G+NSLG  A++NHLH   YY+A   P+E+AP++ +     G  +  L   P  G +F     G  LE L   V  A   L ++ I +N+ +
Sbjct:  124 FNFNKIQPGEVLYRLHREPDLPGTLLQEDILVVINVSPLEWGHVLLVPEPARGLPQRLLPGALRAGIEAVLLSLHPGFRVGFNSLGGLASVNHLHLHGYYLAHRLPVEQAPSEPL---DPGGHLHLLQGLPAPGFLFYTRGPGLDLESLICRVCRATDYLTDHEIAHNLFV 291          
BLAST of EY679844 vs. ExPASy Swiss-Prot
Match: CO058_DANRE (UPF0580 protein C15orf58 homolog OS=Danio rerio GN=zgc:153343 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.134e-17
Identity = 45/137 (32.85%), Postives = 77/137 (56.20%), Query Frame = 2
Query:   95 VAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVFEGGNSLEDLSNTVSDACICLQENNIPYNVLI 505
            V INVSP+E+GH LL+P   +C PQ +   +    +     + +P FR+G+NSLG FA++NHLH   YY+     IE +P K ++     + + EL+++P   L +  G +L+ +   +      L ++NI +N+ +
Sbjct:  120 VIINVSPLEFGHCLLVPEPEKCFPQVLTHLAVQTGIETVLLSADPGFRVGFNSLGGFASVNHLHLHGYYLNHRLKIESSPAKLVL---PNLNLYELVDFPSGFLFYTQGPNLDLVVKAICSLTDVLVDHNIAHNLFL 253          
BLAST of EY679844 vs. ExPASy Swiss-Prot
Match: CO058_XENTR (UPF0580 protein C15orf58 homolog OS=Xenopus tropicalis PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.081e-16
Identity = 46/150 (30.67%), Postives = 80/150 (53.33%), Query Frame = 2
Query:   59 SAPIDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF-EGGNSLEDLSNTVSDACICLQENNIPYNVLI 505
            S  ++ ++S ++V INVSP+E+GHVL +P    CLPQ +  +  L  +     + +P FR+G+NSLG FA++NHLH   +Y+     IE + +K +      +    + ++P  G +F   G  L+  +  +      L   NI +N+ +
Sbjct:  161 SCTLECKSSCTLVVINVSPLEFGHVLFMPDPSLCLPQILTENLMLFGMESVFLSSHPGFRVGFNSLGGFASVNHLHLHGFYLDHELLIESSCSKPLCPE---INFHLVTHFPAPGFLFYTDGKDLKSTAQKICKVTDFLVAKNIAHNLFV 307          
BLAST of EY679844 vs. ExPASy Swiss-Prot
Match: CO058_XENLA (UPF0580 protein C15orf58 homolog OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.864e-16
Identity = 46/147 (31.29%), Postives = 77/147 (52.38%), Query Frame = 2
Query:   68 IDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF-EGGNSLEDLSNTVSDACICLQENNIPYNVLI 505
            ++ +   ++V INVSP+E+GHVL +P    CLPQ +  D  L  L     + +P FR+G+NSLG FA++NHLH   +Y+     IE + +K +      +    + ++P    +F   G +L+  +  +      L   NI +N+ I
Sbjct:  165 LECKGGCTLVVINVSPLEFGHVLFMPDPSLCLPQILTEDLMLFGLESVLLSAHPGFRVGFNSLGGFASVNHLHLHGFYLDHDLFIESSSSKPLCPE---MNFHLITHFPAPSFLFYTDGRNLKSTAQNICKVTDFLVAKNIAHNLFI 308          
The following BLAST results are available for this feature:
BLAST of EY679844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
CO058_HUMAN1.336e-1934.29UPF0580 protein C15orf58 OS=Homo sapiens GN=C15orf... [more]
CO058_MOUSE5.079e-1936.63UPF0580 protein C15orf58 homolog OS=Mus musculus P... [more]
CO058_BOVIN2.520e-1834.50UPF0580 protein C15orf58 homolog OS=Bos taurus PE=... [more]
CO058_MACFA3.292e-1833.92UPF0580 protein C15orf58 homolog OS=Macaca fascicu... [more]
CO058_DANRE2.134e-1732.85UPF0580 protein C15orf58 homolog OS=Danio rerio GN... [more]
CO058_XENTR3.081e-1630.67UPF0580 protein C15orf58 homolog OS=Xenopus tropic... [more]
CO058_XENLA6.864e-1631.29UPF0580 protein C15orf58 homolog OS=Xenopus laevis... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-004-F05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679844 ID=EY679844; Name=EY679844; organism=Citrus sinensis; type=EST; length=994bp
AGAAGAGGTGCTCTTCCAGTTTGAGGCAAGCGAAGATGGTGAAGTCCAGT
TTCACCCAAGTGCCCCCATTGATGTTGAGAATTCTCCAAGTGTTGTTGCC
ATCAATGTGAGTCCTATTGAGTACGGGCATGTGCTGTTGATCCCACGAGT
TCTTGAGTGCTTGCCACAGAGGATTGACCGTGATAGCTTCTTGCTCGCAC
TTTACATGGCTGCAGAAGCTGGGAATCCATACTTCAGGTTGGGTTACAAC
AGCTTGGGTGCATTTGCTACCATCAACCACCTTCACTTCCAGGCTTACTA
CATGGCCTTGCCTTTTCCAATTGAGAAGGCTCCTACCAAGAAGATAATCT
CTACTGGCAGTGGTGTGAAGATCTCTGAGCTTTTAAACTATCCAGTCAGA
GGCCTCGTCTTTGAAGGTGGAAACTCTCTGGAAGACTTATCCAACACAGT
CTCGGATGCGTGCATTTGCCTTCAAGAGAACAACATTCCTTACAATGTTC
TCATTGCTGATTGTGGAAAGCGCATATTTCTCTTACCACAGTGCTATGCT
GAAAAACAAGCTCTTGGGGAAGTGAGTTCAAAGCTTCTGGACACCCAAGT
GAACCCTGCTGTGTGGGAGATTAGTGGGGCATATGGTGGTTAAAGAAGAA
GAAGGACTATGAAGAGGCATCCAAAGAAAATGCCTGGGAGGTGCTTGGCC
GAAATCTCTCCCCTCTGAAGAAAGGTACCAAAAAAGTAAATGCCTCCCCC
CTTTGAAACCCTTTGGCGCGGGGGGAAGAATGCCAAGGGGAGGTGGTTGC
TGAAAAACTAAATTGGGGGAAGCAAAAAAGCCAAAACAAAATTCTGGGGG
GGGGAAATGGGAAACCAATTTAAAAAAAAAACCTTTGTCCCCCGGCCCGG
GGGGTCCGGGGGAAACCCCAAAAAAGGGCCTGGTTTCTTTTCATATAATA
AATCCCCCTGGGGTTTGGGGGGGAAACCACAAACCGGGTTGTGT
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