EY708013

Overview
NameEY708013
Unique NameEY708013
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY708013 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.132e-15
Identity = 44/110 (40.00%), Postives = 63/110 (57.27%), Query Frame = 1 
Query:   16 IVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL----IVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVSTKDGVRRLLLVGDHE 333
            +V+VSTDVN+ F V +  + C+   +W++D+YD+      + T G +G PG  TL +WFKIEKAG       Y    CPSVC SC   C+ IG  + D  +  L + D+E
Sbjct:   97 VVRVSTDVNIEF-VPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG----YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLALSDNE 201
[Close]
BLAST of EY708013 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.202e-14
Identity = 41/110 (37.27%), Postives = 62/110 (56.36%), Query Frame = 1 
Query:   16 IVKVSTDVNLRFPVKVSVKPCN--EEPLWKVDSYDDP----LIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVSTKDGVRRLLLVGD 327
            +V+VSTD+N+ F    +  PC      +W++D YD+      +  GG +G+PG ET+ +WFKIE+   F   G Y +V CP+VC SC  +C  +G+      RR L + D
Sbjct:  104 VVRVSTDLNINFS---AFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE---FCGSGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSD 207
The following BLAST results are available for this feature:
BLAST of EY708013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC4.132e-1540.0021 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU1.202e-1437.27Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-075-B04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY708013 ID=EY708013; Name=EY708013; organism=Citrus sinensis; type=EST; length=595bp
CCACGCGTCCGCAAAATTGTCAAGGTATCCACTGATGTCAACCTGAGATT
CCCCGTAAAAGTTTCTGTTAAGCCCTGTAATGAAGAACCATTGTGGAAAG
TTGATAGCTATGACGATCCATTAATTGTAACCGGCGGAAGTGAGGGCCAC
CCAGGAGCTGAAACGTTGCTAAATTGGTTTAAGATTGAGAAAGCTGGAAA
TTTTTCATATGGTGGTGTATACAATATTGTCCATTGTCCGAGTGTCTGTC
TATCTTGTCCTAGACGCTGCAACAAAATTGGCGTTTCAACTAAGGATGGC
GTTCGACGTCTGCTTCTAGTTGGTGATCATGAACCGGCTTTGAATGTTCT
GTTTTTTCCATCAGAGGAAAGCTCAAGGCTACTTCAAGCTGCTAACGCAA
TATCAAGGTTTTTTGAAGCTGCTGAAGCAATATCAATGACCGCGTAATGA
ATGAACTTAGCTGTATCATTCTAAATAATAGACCAGGCTAGTAACCTTTT
ATCTCTAGTACAGAATAAAAATAACACCGCCTGTGATCCTTTTGCTGTTG
TTAATCTCTACTCATGTTATGTATACATCTTTTAAGTCTCCAAAA
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