EY708011

Overview
NameEY708011
Unique NameEY708011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY708011 vs. ExPASy Swiss-Prot
Match: ACT2_ORYSJ (Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.596e-13
Identity = 38/52 (73.08%), Postives = 41/52 (78.85%), Query Frame = 1 
Query:  664 MADAEDIQPPVWDNGTGMGKAGFAGDDAPRASFPSIVGRPRPQASWLGWAKR 819
            MADAEDIQP V DNGTGM KAGFAGDDAPRA FPSIVGRPR     +G  ++
Sbjct:    1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
[Close]
BLAST of EY708011 vs. ExPASy Swiss-Prot
Match: ACT2_ORYSI (Actin-2 OS=Oryza sativa subsp. indica GN=ACT2 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.596e-13
Identity = 38/52 (73.08%), Postives = 41/52 (78.85%), Query Frame = 1 
Query:  664 MADAEDIQPPVWDNGTGMGKAGFAGDDAPRASFPSIVGRPRPQASWLGWAKR 819
            MADAEDIQP V DNGTGM KAGFAGDDAPRA FPSIVGRPR     +G  ++
Sbjct:    1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
[Close]
BLAST of EY708011 vs. ExPASy Swiss-Prot
Match: ACT1_SORBI (Actin-1 OS=Sorghum bicolor GN=AC1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.596e-13
Identity = 38/52 (73.08%), Postives = 41/52 (78.85%), Query Frame = 1 
Query:  664 MADAEDIQPPVWDNGTGMGKAGFAGDDAPRASFPSIVGRPRPQASWLGWAKR 819
            MADAEDIQP V DNGTGM KAGFAGDDAPRA FPSIVGRPR     +G  ++
Sbjct:    1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
[Close]
BLAST of EY708011 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSJ (Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.596e-13
Identity = 38/52 (73.08%), Postives = 41/52 (78.85%), Query Frame = 1 
Query:  664 MADAEDIQPPVWDNGTGMGKAGFAGDDAPRASFPSIVGRPRPQASWLGWAKR 819
            MADAEDIQP V DNGTGM KAGFAGDDAPRA FPSIVGRPR     +G  ++
Sbjct:    1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
[Close]
BLAST of EY708011 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSI (Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.596e-13
Identity = 38/52 (73.08%), Postives = 41/52 (78.85%), Query Frame = 1 
Query:  664 MADAEDIQPPVWDNGTGMGKAGFAGDDAPRASFPSIVGRPRPQASWLGWAKR 819
            MADAEDIQP V DNGTGM KAGFAGDDAPRA FPSIVGRPR     +G  ++
Sbjct:    1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
[Close]
BLAST of EY708011 vs. ExPASy Swiss-Prot
Match: ACT3_SOYBN (Actin-3 OS=Glycine max GN=SAC3 PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.557e-13
Identity = 37/52 (71.15%), Postives = 41/52 (78.85%), Query Frame = 1 
Query:  664 MADAEDIQPPVWDNGTGMGKAGFAGDDAPRASFPSIVGRPRPQASWLGWAKR 819
            MADAEDI+P V DNGTGM KAGFAGDDAPRA FPSIVGRPR     +G  ++
Sbjct:    1 MADAEDIEPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
[Close]
BLAST of EY708011 vs. ExPASy Swiss-Prot
Match: ACT13_SOLTU (Actin-101 OS=Solanum tuberosum GN=AC101 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.557e-13
Identity = 37/52 (71.15%), Postives = 41/52 (78.85%), Query Frame = 1 
Query:  664 MADAEDIQPPVWDNGTGMGKAGFAGDDAPRASFPSIVGRPRPQASWLGWAKR 819
            MADAEDI+P V DNGTGM KAGFAGDDAPRA FPSIVGRPR     +G  ++
Sbjct:    1 MADAEDIEPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
[Close]
BLAST of EY708011 vs. ExPASy Swiss-Prot
Match: ACT11_SOLTU (Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.557e-13
Identity = 37/52 (71.15%), Postives = 40/52 (76.92%), Query Frame = 1 
Query:  664 MADAEDIQPPVWDNGTGMGKAGFAGDDAPRASFPSIVGRPRPQASWLGWAKR 819
            MAD EDIQP V DNGTGM KAGFAGDDAPRA FPSIVGRPR     +G  ++
Sbjct:    1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHSGVMVGMGQK 52
[Close]
BLAST of EY708011 vs. ExPASy Swiss-Prot
Match: ACT_GOSHI (Actin OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.645e-13
Identity = 37/52 (71.15%), Postives = 40/52 (76.92%), Query Frame = 1 
Query:  664 MADAEDIQPPVWDNGTGMGKAGFAGDDAPRASFPSIVGRPRPQASWLGWAKR 819
            MAD EDIQP V DNGTGM KAGFAGDDAPRA FPSIVGRPR     +G  ++
Sbjct:    1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
[Close]
BLAST of EY708011 vs. ExPASy Swiss-Prot
Match: ACT7_ARATH (Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.645e-13
Identity = 37/52 (71.15%), Postives = 40/52 (76.92%), Query Frame = 1 
Query:  664 MADAEDIQPPVWDNGTGMGKAGFAGDDAPRASFPSIVGRPRPQASWLGWAKR 819
            MAD EDIQP V DNGTGM KAGFAGDDAPRA FPSIVGRPR     +G  ++
Sbjct:    1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
The following BLAST results are available for this feature:
BLAST of EY708011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
ACT2_ORYSJ1.596e-1373.08Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE... [more]
ACT2_ORYSI1.596e-1373.08Actin-2 OS=Oryza sativa subsp. indica GN=ACT2 PE=3... [more]
ACT1_SORBI1.596e-1373.08Actin-1 OS=Sorghum bicolor GN=AC1 PE=2 SV=1[more]
ACT1_ORYSJ1.596e-1373.08Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE... [more]
ACT1_ORYSI1.596e-1373.08Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2... [more]
ACT3_SOYBN3.557e-1371.15Actin-3 OS=Glycine max GN=SAC3 PE=3 SV=2[more]
ACT13_SOLTU3.557e-1371.15Actin-101 OS=Solanum tuberosum GN=AC101 PE=3 SV=1[more]
ACT11_SOLTU3.557e-1371.15Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1[more]
ACT_GOSHI4.645e-1371.15Actin OS=Gossypium hirsutum PE=3 SV=1[more]
ACT7_ARATH4.645e-1371.15Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-075-B02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY708011 ID=EY708011; Name=EY708011; organism=Citrus sinensis; type=EST; length=895bp
CCACGCGTCCGATAGGCTAAAAGCTTCGGTTGATAGTCGTGCTGTGCTTC
CCAGTCACGTCTCTGGTGGCCTACATTGTTCTCTCGAGACCTTTGCTCTC
TTTTTGGACCCGTAGGATCATTCTTTCGGAATTCAGTTTCTTTGGATTTA
TTAGATGTATAAGGCACTCTGATAGGATACTTGTAAATAAAAAAAAATAT
AGTCAATTTGATAATGATCGAGTGACATTAATTAATCCTAAAAGGATCCA
ATCCAGTTCAAATGAACCACTTAAAGTCTAATCCTATAGGTAAGATAAGT
GCTTTTCGATTAGCCTAAAAACTTAAGTCGATAGTTGTGGTGCAGTGTAT
ATCCTTTGTAGGTTCCGAATTGGAAAAAAAAAAATTTAAAAACAATTATA
AAAAATTGAAAAAAGAAGTAAAGATTTCACATTTTATTTTCTTTTGCAAG
TAAGCACTTTTCTTTTCTACCAAATACAGCTCAAGTTAAATTCCATTTGC
ATTTCGTTTTCATTTGGCTTGGTGATATAAAAACATTTTGACCCTTAAAT
ATATATTCTTTAGTGCTTCTCCGCTTCCGCTAGCTGAAGTTAATCTTTTA
CTTGCGTTCCACAGATTAGAAGATTAAACGCTTTTCCTTTGCTTAATCAA
AGGATCATAAAAGATGGCTGATGCTGAAGATATTCAACCCCCTGTCTGGG
ACAATGGAACTGGAATGGGCAAAGCTGGGTTTGCTGGTGATGATGCTCCA
AGGGCAAGTTTCCCTAGTATTGTTGGCAGACCTCGCCCCCAAGCGTCTTG
GTTGGGATGGGCTAAAAGGAGCTTTACTTAAGTGATAAGCCCATTCAAAA
GGGGTTCCTAACTTTGAAGACCCACTTGAGCTTGGATAACCACCC
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