EY679836
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679836 vs. ExPASy Swiss-Prot
Match: ARP_ARATH (Apurinic endonuclease-redox protein OS=Arabidopsis thaliana GN=ARP PE=2 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 7.772e-59 Identity = 82/121 (67.77%), Postives = 93/121 (76.86%), Query Frame = 3 Query: 318 SYRITEWDPSLSSYXXXXXXXXXXXXTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGTNFLSKGFVDTFQAQHPGVVGYTYWGYRHGGAQKPIKGGGLNYFLVSESLAEKFHDSYFLP 680 SYRI EWD +LS++ TGDLNCAH+EIDI+NPAGN+RSAGFT EERQSFG N L KGFVDTF+ QHPGVVGYTYWGYRHGG +K KG L+YFLVS+S+A HDSY LP Sbjct: 401 SYRIEEWDRTLSNHIKELEKSKPVVLTGDLNCAHEEIDIFNPAGNKRSAGFTIEERQSFGANLLDKGFVDTFRKQHPGVVGYTYWGYRHGG-RKTNKGWRLDYFLVSQSIAANVHDSYILP 520 HSP 2 Score: 77.7962 bits (190), Expect = 7.772e-59 Identity = 35/50 (70.00%), Postives = 43/50 (86.00%), Query Frame = 1 Query: 79 LIG*IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYFPNSGDGLRRL 228 +I IKPLSV YG G+S HD+EGR+VTAEFDSF+L++ Y PNSGDGL+RL Sbjct: 351 IISRIKPLSVRYGTGLSGHDTEGRIVTAEFDSFYLINTYVPNSGDGLKRL 400
BLAST of EY679836 vs. ExPASy Swiss-Prot
Match: APEA_DICDI (DNA-(apurinic or apyrimidinic site) lyase OS=Dictyostelium discoideum GN=apeA PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 2.371e-31 Identity = 55/119 (46.22%), Postives = 71/119 (59.66%), Query Frame = 3 Query: 321 YRITEWDPSLSSYXXXXXXXXXXXXTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGTNFLSKGFVDTFQAQHPGVVG-YTYWGYRHGGAQKPIKGGGLNYFLVSESLAEKFHDSYF 674 YRI EWD +Y GDLN AH EID+ NP N++SAGFT EER SF +NFL KG+VD+++ +PG G YT+W Y GG K + G L+YF+VS+ L + S F Sbjct: 225 YRIKEWDVDFQAYLEKLNATKPIIWCGDLNVAHTEIDLKNPKTNKKSAGFTIEERTSF-SNFLEKGYVDSYRHFNPGKEGSYTFWSYLGGGRSKNV-GWRLDYFVVSKRLMDSIKISPF 341 HSP 2 Score: 57.7658 bits (138), Expect = 2.371e-31 Identity = 23/46 (50.00%), Postives = 38/46 (82.61%), Query Frame = 1 Query: 94 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYFPNSGD-GLRRL 228 KP ++T+G+GI+ HD+EGR++T E+D F++++ Y PN+G GL+RL Sbjct: 178 KPNAITFGIGIAKHDNEGRVITLEYDQFYIVNTYIPNAGTRGLQRL 223
BLAST of EY679836 vs. ExPASy Swiss-Prot
Match: EXOA_BACSU (Exodeoxyribonuclease OS=Bacillus subtilis GN=exoA PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 5.269e-31 Identity = 53/117 (45.30%), Postives = 75/117 (64.10%), Query Frame = 3 Query: 321 YRITEWDPSLSSYXXXXXXXXXXXXTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGTNFLSKGFVDTFQAQHPGVVG-YTYWGYRHGGAQKPIKGGGLNYFLVSESLAEKFHDS 668 YR+ +W+ +L SY GDLN AHQEID+ NP NR +AGF+D+ER++F T FL GFVD+F+ +P + G Y++W YR G + I G ++YF+VSESL E+ D+ Sbjct: 119 YRM-QWEEALLSYILELDQKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQEREAF-TRFLEAGFVDSFRHVYPDLEGAYSWWSYRAGARDRNI-GWRIDYFVVSESLKEQIEDA 232 HSP 2 Score: 56.9954 bits (136), Expect = 5.269e-31 Identity = 22/45 (48.89%), Postives = 34/45 (75.56%), Query Frame = 1 Query: 94 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYFPNSGDGLRRL 228 +PL V YG+G+ +HD EGR++T EF++ F+++ Y PNS GL R+ Sbjct: 73 EPLQVIYGIGVEEHDQEGRVITLEFENVFVMTVYTPNSRRGLERI 117
BLAST of EY679836 vs. ExPASy Swiss-Prot
Match: APEX1_PANTR (DNA-(apurinic or apyrimidinic site) lyase OS=Pan troglodytes GN=APEX1 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.435e-26 Identity = 42/112 (37.50%), Postives = 58/112 (51.79%), Query Frame = 3 Query: 336 WDPSLSSYXXXXXXXXXXXXTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGTNFLSKGFVDTFQAQHPGV-VGYTYWGYRHGGAQKPIKGGGLNYFLVSESLAEKFHDS 668 WD + + GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+F+ +P YT+W Y K + G L+YFL+S SL DS Sbjct: 188 WDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNV-GWRLDYFLLSHSLLPALCDS 298 HSP 2 Score: 60.8474 bits (146), Expect = 4.435e-26 Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 1 Query: 97 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYFPNSGDGLRRL 228 PL V+YG+G +HD EGR++ AEFDSF L++ Y PN+G GL RL Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRL 182
BLAST of EY679836 vs. ExPASy Swiss-Prot
Match: APEX1_PANPA (DNA-(apurinic or apyrimidinic site) lyase OS=Pan paniscus GN=APEX1 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.435e-26 Identity = 42/112 (37.50%), Postives = 58/112 (51.79%), Query Frame = 3 Query: 336 WDPSLSSYXXXXXXXXXXXXTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGTNFLSKGFVDTFQAQHPGV-VGYTYWGYRHGGAQKPIKGGGLNYFLVSESLAEKFHDS 668 WD + + GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+F+ +P YT+W Y K + G L+YFL+S SL DS Sbjct: 188 WDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNV-GWRLDYFLLSHSLLPALCDS 298 HSP 2 Score: 60.8474 bits (146), Expect = 4.435e-26 Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 1 Query: 97 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYFPNSGDGLRRL 228 PL V+YG+G +HD EGR++ AEFDSF L++ Y PN+G GL RL Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRL 182
BLAST of EY679836 vs. ExPASy Swiss-Prot
Match: APEX1_HUMAN (DNA-(apurinic or apyrimidinic site) lyase OS=Homo sapiens GN=APEX1 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 4.435e-26 Identity = 42/112 (37.50%), Postives = 58/112 (51.79%), Query Frame = 3 Query: 336 WDPSLSSYXXXXXXXXXXXXTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGTNFLSKGFVDTFQAQHPGV-VGYTYWGYRHGGAQKPIKGGGLNYFLVSESLAEKFHDS 668 WD + + GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+F+ +P YT+W Y K + G L+YFL+S SL DS Sbjct: 188 WDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNV-GWRLDYFLLSHSLLPALCDS 298 HSP 2 Score: 60.8474 bits (146), Expect = 4.435e-26 Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 1 Query: 97 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYFPNSGDGLRRL 228 PL V+YG+G +HD EGR++ AEFDSF L++ Y PN+G GL RL Sbjct: 139 PLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRL 182
BLAST of EY679836 vs. ExPASy Swiss-Prot
Match: APEX1_PONPY (DNA-(apurinic or apyrimidinic site) lyase OS=Pongo pygmaeus GN=APEX1 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.773e-26 Identity = 42/112 (37.50%), Postives = 58/112 (51.79%), Query Frame = 3 Query: 336 WDPSLSSYXXXXXXXXXXXXTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGTNFLSKGFVDTFQAQHPGV-VGYTYWGYRHGGAQKPIKGGGLNYFLVSESLAEKFHDS 668 WD + + GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+F+ +P YT+W Y K + G L+YFL+S SL DS Sbjct: 188 WDEAFRRFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNV-GWRLDYFLLSHSLLTALCDS 298 HSP 2 Score: 60.8474 bits (146), Expect = 5.773e-26 Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 1 Query: 97 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYFPNSGDGLRRL 228 PL V+YG+G +HD EGR++ AEFDSF L++ Y PN+G GL RL Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRL 182
BLAST of EY679836 vs. ExPASy Swiss-Prot
Match: APEX1_GORGO (DNA-(apurinic or apyrimidinic site) lyase OS=Gorilla gorilla gorilla GN=APEX1 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.773e-26 Identity = 42/112 (37.50%), Postives = 58/112 (51.79%), Query Frame = 3 Query: 336 WDPSLSSYXXXXXXXXXXXXTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGTNFLSKGFVDTFQAQHPGV-VGYTYWGYRHGGAQKPIKGGGLNYFLVSESLAEKFHDS 668 WD + + GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+F+ +P YT+W Y K + G L+YFL+S SL DS Sbjct: 188 WDEAFRRFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNV-GWRLDYFLLSHSLLPALCDS 298 HSP 2 Score: 60.8474 bits (146), Expect = 5.773e-26 Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 1 Query: 97 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYFPNSGDGLRRL 228 PL V+YG+G +HD EGR++ AEFDSF L++ Y PN+G GL RL Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRL 182
BLAST of EY679836 vs. ExPASy Swiss-Prot
Match: APEX1_RAT (DNA-(apurinic or apyrimidinic site) lyase OS=Rattus norvegicus GN=Apex1 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 5.774e-26 Identity = 42/112 (37.50%), Postives = 58/112 (51.79%), Query Frame = 3 Query: 336 WDPSLSSYXXXXXXXXXXXXTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGTNFLSKGFVDTFQAQHPGVV-GYTYWGYRHGGAQKPIKGGGLNYFLVSESLAEKFHDS 668 WD + + GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+F+ +P YT+W Y K + G L+YFL+S SL DS Sbjct: 187 WDEAFRKFLKDLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGEMLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNV-GWRLDYFLLSHSLLPALCDS 297 HSP 2 Score: 59.6918 bits (143), Expect = 5.774e-26 Identity = 25/44 (56.82%), Postives = 34/44 (77.27%), Query Frame = 1 Query: 97 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYFPNSGDGLRRL 228 PL V+YG+G +HD EGR++ AEF+SF L++ Y PN+G GL RL Sbjct: 138 PLKVSYGIGEEEHDQEGRVIVAEFESFILVTAYVPNAGRGLVRL 181
BLAST of EY679836 vs. ExPASy Swiss-Prot
Match: APEX1_MOUSE (DNA-(apurinic or apyrimidinic site) lyase OS=Mus musculus GN=Apex1 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 9.782e-26 Identity = 42/112 (37.50%), Postives = 58/112 (51.79%), Query Frame = 3 Query: 336 WDPSLSSYXXXXXXXXXXXXTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGTNFLSKGFVDTFQAQHPGVV-GYTYWGYRHGGAQKPIKGGGLNYFLVSESLAEKFHDS 668 WD + + GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+F+ +P YT+W Y K + G L+YFL+S SL DS Sbjct: 187 WDEAFRKFLKDLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNV-GWRLDYFLLSHSLLPALCDS 297 HSP 2 Score: 59.3066 bits (142), Expect = 9.782e-26 Identity = 25/44 (56.82%), Postives = 34/44 (77.27%), Query Frame = 1 Query: 97 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYFPNSGDGLRRL 228 PL V+YG+G +HD EGR++ AEF+SF L++ Y PN+G GL RL Sbjct: 138 PLKVSYGIGEEEHDQEGRVIVAEFESFVLVTAYVPNAGRGLVRL 181 The following BLAST results are available for this feature:
BLAST of EY679836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679836 ID=EY679836; Name=EY679836; organism=Citrus sinensis; type=EST; length=878bpback to top |