EY679834

Overview
NameEY679834
Unique NameEY679834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1015
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9826 contig Csv1_Contig9826:915..1929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY679834 vs. ExPASy Swiss-Prot
Match: D1039_DICDI (Probable ubiquitin thiolesterase DG1039 OS=Dictyostelium discoideum GN=DG1039 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.334e-19
Identity = 49/114 (42.98%), Postives = 71/114 (62.28%), Query Frame = 1
Query:   52 LAQVQQASIPPSRVADPRPG-PAQDISLNTNEYQHLHVPVNMMQDFLRLARANTEKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIH 390
            LAQ    + P       +P   + + S   ++ + + V   + Q+F+RLA  NT++++ETCG+L+G+L N VF ITT+IIPKQE T+D+C T+ E EIFE Q    L  LGWIH
Sbjct:  502 LAQSPAVNTPSITPTTNKPNIDSSEASKKYSKLRKIIVHGEVFQEFMRLAENNTKRSIETCGILSGTLSNDVFRITTIIIPKQEGTTDTCNTIEEHEIFEYQLENDLLTLGWIH 615          
BLAST of EY679834 vs. ExPASy Swiss-Prot
Match: SST2_SCHPO (AMSH-like protease sst2 OS=Schizosaccharomyces pombe GN=sst2 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.790e-19
Identity = 45/107 (42.06%), Postives = 68/107 (63.55%), Query Frame = 1
Query:   85 SRVADPRPGPAQDISLNT-----NEYQHLHVPVNMMQDFLRLARANTEKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIH 390
            +R ++PRP PA    ++         + +++P  + + FL + + NT+KNLETCG+L G L+   F IT L+IP QE+TSD+C T +E  +FE QD+ +L  LGWIH
Sbjct:  235 TRTSEPRPKPAGTFKIHAYTEGGKPLRTIYLPKLLKKVFLDVVKPNTKKNLETCGILCGKLRQNAFFITHLVIPLQEATSDTCGTTDEASLFEFQDKHNLLTLGWIH 341          
BLAST of EY679834 vs. ExPASy Swiss-Prot
Match: STABP_HUMAN (STAM-binding protein OS=Homo sapiens GN=STAMBP PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.580e-18
Identity = 50/123 (40.65%), Postives = 72/123 (58.54%), Query Frame = 1
Query:   22 STKQPSPPPVLAQVQQASIPPSRVADPRPGPAQDISLNTNEYQHLHVPVNMMQDFLRLARANTEKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIH 390
            +T +P+ PPV+ +    S+ P  +++    P  D        +H+ VP  +   FL+LA ANT + +ETCG+L G L    F IT ++IPKQ + SD C T NEEE+F +QD+  L  LGWIH
Sbjct:  223 TTVRPAKPPVVDR----SLKPGALSNSESIPTID------GLRHVVVPGRLCPQFLQLASANTARGVETCGILCGKLMRNEFTITHVLIPKQSAGSDYCNTENEEELFLIQDQQGLITLGWIH 335          
BLAST of EY679834 vs. ExPASy Swiss-Prot
Match: STABP_RAT (STAM-binding protein OS=Rattus norvegicus GN=Stambp PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.370e-18
Identity = 52/123 (42.28%), Postives = 71/123 (57.72%), Query Frame = 1
Query:   22 STKQPSPPPVLAQVQQASIPPSRVADPRPGPAQDISLNTNEYQHLHVPVNMMQDFLRLARANTEKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIH 390
            +T +P+ PPV+ +    S+ P  ++     P  +        +H+ VP N+  +FL+LA ANT K +ETCGVL G L    F IT ++IP+Q    D C T NEEEIF +QD L L  LGWIH
Sbjct:  223 TTLRPAKPPVVDR----SLKPGALSVIENVPTIE------GLRHIVVPRNLCSEFLQLASANTAKGIETCGVLCGKLMRNEFTITHVLIPRQNGGPDYCHTENEEEIFFMQDDLGLLTLGWIH 335          
BLAST of EY679834 vs. ExPASy Swiss-Prot
Match: STABP_MOUSE (STAM-binding protein OS=Mus musculus GN=Stambp PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 7.507e-18
Identity = 44/81 (54.32%), Postives = 54/81 (66.67%), Query Frame = 1
Query:  148 QHLHVPVNMMQDFLRLARANTEKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIH 390
            +H+ VP N+  +FL+LA ANT K +ETCGVL G L    F IT ++IP+Q    D C T NEEEIF +QD L L  LGWIH
Sbjct:  255 RHIVVPRNLCSEFLQLASANTAKGIETCGVLCGKLMRNEFTITHVLIPRQNGGPDYCHTENEEEIFFMQDDLGLLTLGWIH 335          
BLAST of EY679834 vs. ExPASy Swiss-Prot
Match: STABP_DANRE (STAM-binding protein-like OS=Danio rerio GN=stambp PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.866e-17
Identity = 48/119 (40.34%), Postives = 61/119 (51.26%), Query Frame = 1
Query:   34 PSPPPVLAQVQQASIPPSRVADPRPGPAQDISLNTNEYQHLHVPVNMMQDFLRLARANTEKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIH 390
            P  PP  A   Q      R   P    +   S   N  + L VP  + Q FL+LA  NT + +ETCG+L G L    F +T +I+PKQ    D C T NEEE+F +QD+  L  LGWIH
Sbjct:  211 PQTPPAGATNHQGLPAFDRSLKPSVPVSAGHSALVNGLRQLFVPAELCQRFLKLAETNTARAVETCGILCGKLMKNAFTVTHVIVPKQCGGPDYCDTENEEELFLIQDQNDLITLGWIH 329          
BLAST of EY679834 vs. ExPASy Swiss-Prot
Match: STABP_XENLA (STAM-binding protein-like OS=Xenopus laevis GN=stambp PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.154e-16
Identity = 46/122 (37.70%), Postives = 65/122 (53.28%), Query Frame = 1
Query:   25 TKQPSPPPVLAQVQQASIPPSRVADPRPGPAQDISLNTNEYQHLHVPVNMMQDFLRLARANTEKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIH 390
            T QP PP V       S+ PS       G   D        +H+ +P ++   FL+L+  NT++ +ETCG+L G L    F +T +I+PKQ    D C T +EEE+F +QD+  L  LGWIH
Sbjct:  217 TVQPHPPAV-----DRSLKPSSYGSNSSGVTSD------GLRHVKIPRDVCCKFLQLSENNTQRGVETCGILCGKLLQNEFTVTHVIVPKQSGGPDYCNTESEEELFLIQDQQGLITLGWIH 327          
BLAST of EY679834 vs. ExPASy Swiss-Prot
Match: STALP_PONAB (AMSH-like protease OS=Pongo abelii GN=STAMBPL1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.952e-14
Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 1
Query:  160 VPVNMMQDFLRLARANTEKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIH 390
            +P ++   FL+LA +NT + +ETCG+L G L +  F IT +I+PKQ +  D C   N EE+F VQD+  L  LGWIH
Sbjct:  271 LPKDLCHKFLQLAESNTVRGIETCGILCGKLTHNEFTITHVIVPKQSAGPDYCDVENVEELFNVQDQHDLLTLGWIH 347          
BLAST of EY679834 vs. ExPASy Swiss-Prot
Match: STALP_HUMAN (AMSH-like protease OS=Homo sapiens GN=STAMBPL1 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.855e-14
Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 1
Query:  160 VPVNMMQDFLRLARANTEKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIH 390
            +P ++   FL+LA +NT + +ETCG+L G L +  F IT +I+PKQ +  D C   N EE+F VQD+  L  LGWIH
Sbjct:  271 LPEDLCHKFLQLAESNTVRGIETCGILCGKLTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIH 347          
BLAST of EY679834 vs. ExPASy Swiss-Prot
Match: STALP_MOUSE (AMSH-like protease OS=Mus musculus GN=Stambpl1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.271e-13
Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = 1
Query:  169 NMMQDFLRLARANTEKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIH 390
            ++   FL LA +NT + +ETCG+L G L +  F IT +++PKQ +  D C   N EE+F VQD+  L  LGWIH
Sbjct:  274 DLCHKFLLLADSNTVRGIETCGILCGKLTHNEFTITHVVVPKQSAGPDYCDVENVEELFNVQDQHGLLTLGWIH 347          
The following BLAST results are available for this feature:
BLAST of EY679834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
D1039_DICDI2.334e-1942.98Probable ubiquitin thiolesterase DG1039 OS=Dictyos... [more]
SST2_SCHPO6.790e-1942.06AMSH-like protease sst2 OS=Schizosaccharomyces pom... [more]
STABP_HUMAN2.580e-1840.65STAM-binding protein OS=Homo sapiens GN=STAMBP PE=... [more]
STABP_RAT3.370e-1842.28STAM-binding protein OS=Rattus norvegicus GN=Stamb... [more]
STABP_MOUSE7.507e-1854.32STAM-binding protein OS=Mus musculus GN=Stambp PE=... [more]
STABP_DANRE4.866e-1740.34STAM-binding protein-like OS=Danio rerio GN=stambp... [more]
STABP_XENLA3.154e-1637.70STAM-binding protein-like OS=Xenopus laevis GN=sta... [more]
STALP_PONAB2.952e-1446.75AMSH-like protease OS=Pongo abelii GN=STAMBPL1 PE=... [more]
STALP_HUMAN3.855e-1446.75AMSH-like protease OS=Homo sapiens GN=STAMBPL1 PE=... [more]
STALP_MOUSE7.271e-1345.95AMSH-like protease OS=Mus musculus GN=Stambpl1 PE=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-004-E06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679834 ID=EY679834; Name=EY679834; organism=Citrus sinensis; type=EST; length=1015bp
GAGGATCCCTTCCAGTTTGTCAGTACCAAGCAACCTTCTCCTCCTCCTGT
TCTTGCTCAAGTGCAGCAAGCTTCAATACCTCCATCCAGAGTGGCAGATC
CAAGACCTGGCCCGGCTCAGGATATATCATTAAACACAAATGAATATCAG
CATTTACATGTTCCAGTAAATATGATGCAAGATTTCTTAAGATTAGCTCG
AGCAAATACCGAAAAAAATTTAGAAACCTGTGGTGTTCTTGCTGGATCGT
TGAAAAACAGGGTTTTTCACATAACTACTCTCATTATCCCAAAGCAGGAA
TCAACTTCTGATTCGTGTCAGACATTGAATGAAGAAGAAATTTTTGAAGT
TCAAGATAGATTATCTCTTTTCCCTCTTGGCTGGATTCATGTAAGTTATT
GAGAGCCATGATGCCAGTAATTCTCAGTTATCTTCAATTTAGTTATTAAA
ATTTATTCCCTCTTATCACTTTTTAATATTGATATGTTTAGTCTTCTCTG
CTAATGGTAGCTAGTGGTGTTATCTCGAACAAAAATTAAAAGAATAATGA
ACTGTTTGATTACTCTTTTAATTGCTTTTCTGTGAATGTGGATAACCATG
GAAAGTTGGGGCTAACAAAAATTAAGGACTTCCTTTTAATTTATTAGGCC
CCCCTGGTACTGATGGCACAAATGGTGCAGGGTTTACGAAATTAAAAAAC
TTTGTATCCCTGGGGAATTTTAGTTATTTTATTTTAAGGTTTGGTATCAA
AACCACCCCCCAACCCAAACTTTGTTTTCTTGGCCCTCCAAGCGATCTGC
CCCCACCCTTTCCTCTTAATCCGGGAAAAAAAAACCGGGACTTCTCCCTC
GTTTTCTTTGAACTATGTTTATTCCGCTTTTTGGGCCAGGGAATTAACAC
TTTTCTCCACAAACGGAAAAAGGGCACAAAGGGCGCGAACAACACCCCCT
TTCCGTTTGGGTTTTTTATCCTTTTACACCACAAACGGGCGGGCCCCCCC
GCATATCAACCCTAA
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