EY744774

Overview
NameEY744774
Unique NameEY744774
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1008
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744774 vs. ExPASy Swiss-Prot
Match: ATPG3_IPOBA (ATP synthase subunit gamma, mitochondrial OS=Ipomoea batatas GN=ATPC PE=1 SV=2)

HSP 1 Score: 277.715 bits (709), Expect = 7.350e-74
Identity = 146/181 (80.66%), Postives = 161/181 (88.95%), Query Frame = 3
Query:  141 MAMAALRREGRRFAT-PLISPRPIAAIRSPFLS--EEDAPLGVRSISTQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDQENKYVILGEKAKAILIRDSKKDIDLIITELQKNHLNYT 674
            MAMAALRREGRR A  P  SP P+ A+RS  +S  EE    GVRSISTQ+VRNRMKSVKNIQKITKAMKMVAASKLRAIQ +AENSRGLWQPFTALLGDTP+VD KKNVI+TISSDKGLCGGINST+VK S+++HKLNSGP++ENKYVILGEKAKA L+RDSKKDI+LIITELQKN LNYT
Sbjct:    1 MAMAALRREGRRLAAAPFTSPTPLNALRSSLVSPSEEIGLSGVRSISTQVVRNRMKSVKNIQKITKAMKMVAASKLRAIQTRAENSRGLWQPFTALLGDTPSVDVKKNVIITISSDKGLCGGINSTSVKTSRNIHKLNSGPEKENKYVILGEKAKAQLVRDSKKDIELIITELQKNPLNYT 181          
BLAST of EY744774 vs. ExPASy Swiss-Prot
Match: ATPG3_ARATH (ATP synthase subunit gamma, mitochondrial OS=Arabidopsis thaliana GN=ATPC PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 2.991e-67
Identity = 132/178 (74.16%), Postives = 155/178 (87.08%), Query Frame = 3
Query:  141 MAMAALRREGRRFATPLISPRPIAAIRSPFLSE-EDAPLGVRSISTQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDQENKYVILGEKAKAILIRDSKKDIDLIITELQKNHLNY 671
            MAMA  RREGRR   P I+ RPIAAIRSP  S+ E+  LGVRSISTQ+VRNRMKSVKNIQKITKAMKMVAASKLRA+Q +AENSRGLWQPFTALLGD P++D KK+V+VT+SSDKGLCGGINST VK+S++L+KLN+GP++E ++VI+GEKAKAI+ RDSK DI L +TEL KN LNY
Sbjct:    1 MAMAVFRREGRRLL-PSIAARPIAAIRSPLSSDQEEGLLGVRSISTQVVRNRMKSVKNIQKITKAMKMVAASKLRAVQGRAENSRGLWQPFTALLGDNPSIDVKKSVVVTLSSDKGLCGGINSTVVKVSRALYKLNAGPEKEVQFVIVGEKAKAIMFRDSKNDIVLSVTELNKNPLNY 177          
BLAST of EY744774 vs. ExPASy Swiss-Prot
Match: ATPG_RHOCS (ATP synthase gamma chain OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=atpG PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.248e-13
Identity = 48/130 (36.92%), Postives = 71/130 (54.62%), Query Frame = 3
Query:  270 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDQENKYVILGEKAKAILIRD 614
            S + +RNR+ SVK+ QKIT AMKMVAASKLR  Q +AE  R        +L                 T T   + +++V ++SD+GLCGG NST V+ ++   K  +G  +  K + +G K + +L R+
Sbjct:    3 SLKDIRNRIGSVKSTQKITSAMKMVAASKLRRAQEQAEAGRPFADRMARMLASLAANVSGATGGPRLMTGTGSDQVHLLVVVTSDRGLCGGFNSTIVREARRTIKRLTGEGRTVKLLCVGRKGRDLLRRE 132          
BLAST of EY744774 vs. ExPASy Swiss-Prot
Match: ATPG_ERYLH (ATP synthase gamma chain OS=Erythrobacter litoralis (strain HTCC2594) GN=atpG PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.236e-13
Identity = 48/138 (34.78%), Postives = 78/138 (56.52%), Query Frame = 3
Query:  270 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA------------------KKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDQENKYVILGEKAKAILIRDSKKDI 629
            S + +++R+ SVK+ QKITKA +MVAA+KLR  Q  AE +R    P+   L D     A                  +K+++V +++DKGLCGG+NS  VK +K+  K      ++ ++ ++G+K +A + RD +K I
Sbjct:    3 SLKELKDRIGSVKSTQKITKAKQMVAAAKLRRAQANAEAAR----PYAERLADVMASLAGKVSGDSAPRLLAGSGNDQKHLLVVVNTDKGLCGGLNSNIVKEAKAQAKKLIAAGKDVQFYLVGKKGRAPIKRDYEKQI 136          
BLAST of EY744774 vs. ExPASy Swiss-Prot
Match: ATPG_ROSDO (ATP synthase gamma chain OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=atpG PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.750e-12
Identity = 43/130 (33.08%), Postives = 75/130 (57.69%), Query Frame = 3
Query:  270 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDQENKYVILGEKAKAILIRD 614
            S + ++NR++SVK+ +KITKAM+MVAA+KLR  Q  AE SR   + F A++                 + T   K  +++ ++S++GLCGG N+   K++++  +   G  ++ K + +G+K +  L RD
Sbjct:    3 SLKDLKNRIESVKSTRKITKAMQMVAAAKLRRAQEAAEQSRPYTERFNAVMAGLAASVGGSDSAPKLLSGTGSDKVQLLIVMTSERGLCGGFNTNIAKLARAHAQKLQGEGKDVKILTVGKKGRDQLKRD 132          
BLAST of EY744774 vs. ExPASy Swiss-Prot
Match: ATPG_BOVIN (ATP synthase subunit gamma, mitochondrial OS=Bos taurus GN=ATP5C1 PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 2.750e-12
Identity = 49/122 (40.16%), Postives = 76/122 (62.30%), Query Frame = 3
Query:  258 VRSIST-QIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL--GDTPTV-DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDQENKYVILGEKAKAILIR 611
            VR+++T + +  R+KS+KNIQKITK+MKMVAA+K    + + + +R       AL    D  T  D KK++I+ +SSD+GLCG I+S+  K  KS     +   +E K + +G+K ++IL R
Sbjct:   22 VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGVGSLALYEKADIKTPEDKKKHLIIGVSSDRGLCGAIHSSVAKQMKSEAANLAAAGKEVKIIGVGDKIRSILHR 143          
BLAST of EY744774 vs. ExPASy Swiss-Prot
Match: ATPG_MOUSE (ATP synthase subunit gamma, mitochondrial OS=Mus musculus GN=Atp5c1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.591e-12
Identity = 49/126 (38.89%), Postives = 74/126 (58.73%), Query Frame = 3
Query:  258 VRSIST-QIVRNRMKSVKNIQKITKAMKMVAASK-------LRAIQVKAENSRGLWQPFTALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDQENKYVILGEKAKAILIR 611
            VR+++T + +  R+KS+KNIQKITK+MKMVAA+K       L+  +V    S  L++       +    D KK++I+ +SSD+GLCG I+S+  K  K+     +   +E   V +GEK K IL R
Sbjct:   22 VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTGSLALYEKADIKAPE----DKKKHLIIGVSSDRGLCGAIHSSVAKQMKNEVAALTAAGKEVMIVGVGEKIKGILYR 143          
BLAST of EY744774 vs. ExPASy Swiss-Prot
Match: ATPG_RAT (ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus GN=Atp5c1 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 6.125e-12
Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 3
Query:  282 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDQENKYVILGEKAKAILIR 611
            +  R+KS+KNIQKITK+MKMVAA+K    + + + +R       AL          D KK++I+ +SSD+GLCG I+S+  K  K+     +   +E   V +GEK K+IL R
Sbjct:    6 ITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTGSLALYEKAEIKGPEDKKKHLIIGVSSDRGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSILYR 118          
BLAST of EY744774 vs. ExPASy Swiss-Prot
Match: ATPG_DINSH (ATP synthase gamma chain OS=Dinoroseobacter shibae (strain DFL 12) GN=atpG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.365e-11
Identity = 45/129 (34.88%), Postives = 76/129 (58.91%), Query Frame = 3
Query:  282 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-------GDTP--------TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDQENKYVILGEKAKAILIRDSKK 623
            ++NR++SVK+ +KITKAM+MVAA+KLR  Q  AE SR   + F A+L       GD+         T   + +++V +++++GLCGG NS+  K++++  +      +  K + +G+K +  L RD  K
Sbjct:    7 LKNRIESVKSTRKITKAMQMVAAAKLRRAQDAAEASRPYTERFNAVLAGLAASVGDSDSGPRLLVGTGSDQTHLLVVMTAERGLCGGFNSSIAKLARAHAEKLVAQGKTVKILTVGKKGREQLKRDLSK 135          
BLAST of EY744774 vs. ExPASy Swiss-Prot
Match: ATPG_MACFA (ATP synthase subunit gamma, mitochondrial OS=Macaca fascicularis GN=ATP5C1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.782e-11
Identity = 46/126 (36.51%), Postives = 75/126 (59.52%), Query Frame = 3
Query:  258 VRSIST-QIVRNRMKSVKNIQKITKAMKMVAASK-------LRAIQVKAENSRGLWQPFTALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDQENKYVILGEKAKAILIR 611
            VR+++T + +  R+KS+KNIQKITK+MKMVAA+K       L+  ++    S  L++     + +    D KK++++ +SSD+GLCG I+S+  K  KS     +   +E   V +G+K + IL R
Sbjct:   22 VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKADIKVPE----DKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYR 143          
The following BLAST results are available for this feature:
BLAST of EY744774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
ATPG3_IPOBA7.350e-7480.66ATP synthase subunit gamma, mitochondrial OS=Ipomo... [more]
ATPG3_ARATH2.991e-6774.16ATP synthase subunit gamma, mitochondrial OS=Arabi... [more]
ATPG_RHOCS3.248e-1336.92ATP synthase gamma chain OS=Rhodospirillum centenu... [more]
ATPG_ERYLH7.236e-1334.78ATP synthase gamma chain OS=Erythrobacter litorali... [more]
ATPG_ROSDO2.750e-1233.08ATP synthase gamma chain OS=Roseobacter denitrific... [more]
ATPG_BOVIN2.750e-1240.16ATP synthase subunit gamma, mitochondrial OS=Bos t... [more]
ATPG_MOUSE3.591e-1238.89ATP synthase subunit gamma, mitochondrial OS=Mus m... [more]
ATPG_RAT6.125e-1239.82ATP synthase subunit gamma, mitochondrial OS=Rattu... [more]
ATPG_DINSH1.365e-1134.88ATP synthase gamma chain OS=Dinoroseobacter shibae... [more]
ATPG_MACFA1.782e-1136.51ATP synthase subunit gamma, mitochondrial OS=Macac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-D06-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744774 ID=EY744774; Name=EY744774; organism=Citrus sinensis; type=EST; length=1008bp
CCACGCGTCCGCCCACGCGTCCGGTGAAATTTGTTCGACACCTGAGCTCG
CACGACCCAAACAGAACATAAAGCTTTGGATCTGCAGCGTTCAAAATAAA
ATATTTCTAGGGTTTCCTACGACGACGGTTCATCAGAAAAATGGCGATGG
CTGCTCTGAGGCGCGAAGGCCGGCGATTCGCCACCCCTCTCATCTCCCCA
CGTCCAATCGCCGCAATCAGATCCCCTTTCCTTTCCGAGGAGGATGCCCC
TCTGGGAGTCCGGTCTATTTCAACTCAAATTGTTAGAAACCGGATGAAGA
GTGTTAAGAATATTCAGAAAATTACAAAGGCTATGAAGATGGTTGCAGCC
TCAAAGTTAAGAGCAATTCAAGTTAAAGCTGAAAATTCCCGTGGTCTGTG
GCAGCCATTCACTGCACTTCTTGGTGACACTCCCACTGTTGATGCTAAGA
AGAATGTTATTGTGACCATCTCTTCTGACAAAGGTCTATGTGGTGGAATT
AACTCTACTGCAGTTAAGATAAGCAAGAGTTTGCACAAGTTGAATTCTGG
TCCCGACCAAGAAAACAAATACGTCATCTTGGGAGAGAAGGCAAAGGCAA
TATTAATACGTGACTCCAAAAAAGATATTGACCTCATCATAACAGAGTTA
CAGAAAAACCATCTAAATTATACCCACGGTTTCCGTTCCTTGCGATAATA
ACTCAAAAAAATGTAGGAACCCCACGCCTCCGAAGGTAATCTAGAACACA
CTCCCTACCAGCCAGCCCCCCTTCCGNCCAACAATGGCAAACTGTATTAT
TCCCCCGAGCTTGGGGAAAAAAGAAACCCCAAATCCGGGGGAAAAACCTT
GGGGGACCCAAAAACCCCTACAAAAATTGAAAGGGGGGGGAAACCAAAGG
GGGGAAAAATCTTAAAAAACCCGGGGGCGAGAATTTCCATATTCCCCTTG
TGGTCCTTCGTGTCCACATGCCCGGGGGTGTGGGGAAAAAAACGCACTTT
CGCCAACA
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