EY744774
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744774 vs. ExPASy Swiss-Prot
Match: ATPG3_IPOBA (ATP synthase subunit gamma, mitochondrial OS=Ipomoea batatas GN=ATPC PE=1 SV=2) HSP 1 Score: 277.715 bits (709), Expect = 7.350e-74 Identity = 146/181 (80.66%), Postives = 161/181 (88.95%), Query Frame = 3 Query: 141 MAMAALRREGRRFAT-PLISPRPIAAIRSPFLS--EEDAPLGVRSISTQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDQENKYVILGEKAKAILIRDSKKDIDLIITELQKNHLNYT 674 MAMAALRREGRR A P SP P+ A+RS +S EE GVRSISTQ+VRNRMKSVKNIQKITKAMKMVAASKLRAIQ +AENSRGLWQPFTALLGDTP+VD KKNVI+TISSDKGLCGGINST+VK S+++HKLNSGP++ENKYVILGEKAKA L+RDSKKDI+LIITELQKN LNYT Sbjct: 1 MAMAALRREGRRLAAAPFTSPTPLNALRSSLVSPSEEIGLSGVRSISTQVVRNRMKSVKNIQKITKAMKMVAASKLRAIQTRAENSRGLWQPFTALLGDTPSVDVKKNVIITISSDKGLCGGINSTSVKTSRNIHKLNSGPEKENKYVILGEKAKAQLVRDSKKDIELIITELQKNPLNYT 181
BLAST of EY744774 vs. ExPASy Swiss-Prot
Match: ATPG3_ARATH (ATP synthase subunit gamma, mitochondrial OS=Arabidopsis thaliana GN=ATPC PE=1 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.991e-67 Identity = 132/178 (74.16%), Postives = 155/178 (87.08%), Query Frame = 3 Query: 141 MAMAALRREGRRFATPLISPRPIAAIRSPFLSE-EDAPLGVRSISTQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDQENKYVILGEKAKAILIRDSKKDIDLIITELQKNHLNY 671 MAMA RREGRR P I+ RPIAAIRSP S+ E+ LGVRSISTQ+VRNRMKSVKNIQKITKAMKMVAASKLRA+Q +AENSRGLWQPFTALLGD P++D KK+V+VT+SSDKGLCGGINST VK+S++L+KLN+GP++E ++VI+GEKAKAI+ RDSK DI L +TEL KN LNY Sbjct: 1 MAMAVFRREGRRLL-PSIAARPIAAIRSPLSSDQEEGLLGVRSISTQVVRNRMKSVKNIQKITKAMKMVAASKLRAVQGRAENSRGLWQPFTALLGDNPSIDVKKSVVVTLSSDKGLCGGINSTVVKVSRALYKLNAGPEKEVQFVIVGEKAKAIMFRDSKNDIVLSVTELNKNPLNY 177
BLAST of EY744774 vs. ExPASy Swiss-Prot
Match: ATPG_RHOCS (ATP synthase gamma chain OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=atpG PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.248e-13 Identity = 48/130 (36.92%), Postives = 71/130 (54.62%), Query Frame = 3 Query: 270 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDQENKYVILGEKAKAILIRD 614 S + +RNR+ SVK+ QKIT AMKMVAASKLR Q +AE R +L T T + +++V ++SD+GLCGG NST V+ ++ K +G + K + +G K + +L R+ Sbjct: 3 SLKDIRNRIGSVKSTQKITSAMKMVAASKLRRAQEQAEAGRPFADRMARMLASLAANVSGATGGPRLMTGTGSDQVHLLVVVTSDRGLCGGFNSTIVREARRTIKRLTGEGRTVKLLCVGRKGRDLLRRE 132
BLAST of EY744774 vs. ExPASy Swiss-Prot
Match: ATPG_ERYLH (ATP synthase gamma chain OS=Erythrobacter litoralis (strain HTCC2594) GN=atpG PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 7.236e-13 Identity = 48/138 (34.78%), Postives = 78/138 (56.52%), Query Frame = 3 Query: 270 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA------------------KKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDQENKYVILGEKAKAILIRDSKKDI 629 S + +++R+ SVK+ QKITKA +MVAA+KLR Q AE +R P+ L D A +K+++V +++DKGLCGG+NS VK +K+ K ++ ++ ++G+K +A + RD +K I Sbjct: 3 SLKELKDRIGSVKSTQKITKAKQMVAAAKLRRAQANAEAAR----PYAERLADVMASLAGKVSGDSAPRLLAGSGNDQKHLLVVVNTDKGLCGGLNSNIVKEAKAQAKKLIAAGKDVQFYLVGKKGRAPIKRDYEKQI 136
BLAST of EY744774 vs. ExPASy Swiss-Prot
Match: ATPG_ROSDO (ATP synthase gamma chain OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=atpG PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.750e-12 Identity = 43/130 (33.08%), Postives = 75/130 (57.69%), Query Frame = 3 Query: 270 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDQENKYVILGEKAKAILIRD 614 S + ++NR++SVK+ +KITKAM+MVAA+KLR Q AE SR + F A++ + T K +++ ++S++GLCGG N+ K++++ + G ++ K + +G+K + L RD Sbjct: 3 SLKDLKNRIESVKSTRKITKAMQMVAAAKLRRAQEAAEQSRPYTERFNAVMAGLAASVGGSDSAPKLLSGTGSDKVQLLIVMTSERGLCGGFNTNIAKLARAHAQKLQGEGKDVKILTVGKKGRDQLKRD 132
BLAST of EY744774 vs. ExPASy Swiss-Prot
Match: ATPG_BOVIN (ATP synthase subunit gamma, mitochondrial OS=Bos taurus GN=ATP5C1 PE=1 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 2.750e-12 Identity = 49/122 (40.16%), Postives = 76/122 (62.30%), Query Frame = 3 Query: 258 VRSIST-QIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL--GDTPTV-DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDQENKYVILGEKAKAILIR 611 VR+++T + + R+KS+KNIQKITK+MKMVAA+K + + + +R AL D T D KK++I+ +SSD+GLCG I+S+ K KS + +E K + +G+K ++IL R Sbjct: 22 VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGVGSLALYEKADIKTPEDKKKHLIIGVSSDRGLCGAIHSSVAKQMKSEAANLAAAGKEVKIIGVGDKIRSILHR 143
BLAST of EY744774 vs. ExPASy Swiss-Prot
Match: ATPG_MOUSE (ATP synthase subunit gamma, mitochondrial OS=Mus musculus GN=Atp5c1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.591e-12 Identity = 49/126 (38.89%), Postives = 74/126 (58.73%), Query Frame = 3 Query: 258 VRSIST-QIVRNRMKSVKNIQKITKAMKMVAASK-------LRAIQVKAENSRGLWQPFTALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDQENKYVILGEKAKAILIR 611 VR+++T + + R+KS+KNIQKITK+MKMVAA+K L+ +V S L++ + D KK++I+ +SSD+GLCG I+S+ K K+ + +E V +GEK K IL R Sbjct: 22 VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTGSLALYEKADIKAPE----DKKKHLIIGVSSDRGLCGAIHSSVAKQMKNEVAALTAAGKEVMIVGVGEKIKGILYR 143
BLAST of EY744774 vs. ExPASy Swiss-Prot
Match: ATPG_RAT (ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus GN=Atp5c1 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 6.125e-12 Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 3 Query: 282 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDQENKYVILGEKAKAILIR 611 + R+KS+KNIQKITK+MKMVAA+K + + + +R AL D KK++I+ +SSD+GLCG I+S+ K K+ + +E V +GEK K+IL R Sbjct: 6 ITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTGSLALYEKAEIKGPEDKKKHLIIGVSSDRGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSILYR 118
BLAST of EY744774 vs. ExPASy Swiss-Prot
Match: ATPG_DINSH (ATP synthase gamma chain OS=Dinoroseobacter shibae (strain DFL 12) GN=atpG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.365e-11 Identity = 45/129 (34.88%), Postives = 76/129 (58.91%), Query Frame = 3 Query: 282 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-------GDTP--------TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDQENKYVILGEKAKAILIRDSKK 623 ++NR++SVK+ +KITKAM+MVAA+KLR Q AE SR + F A+L GD+ T + +++V +++++GLCGG NS+ K++++ + + K + +G+K + L RD K Sbjct: 7 LKNRIESVKSTRKITKAMQMVAAAKLRRAQDAAEASRPYTERFNAVLAGLAASVGDSDSGPRLLVGTGSDQTHLLVVMTAERGLCGGFNSSIAKLARAHAEKLVAQGKTVKILTVGKKGREQLKRDLSK 135
BLAST of EY744774 vs. ExPASy Swiss-Prot
Match: ATPG_MACFA (ATP synthase subunit gamma, mitochondrial OS=Macaca fascicularis GN=ATP5C1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.782e-11 Identity = 46/126 (36.51%), Postives = 75/126 (59.52%), Query Frame = 3 Query: 258 VRSIST-QIVRNRMKSVKNIQKITKAMKMVAASK-------LRAIQVKAENSRGLWQPFTALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDQENKYVILGEKAKAILIR 611 VR+++T + + R+KS+KNIQKITK+MKMVAA+K L+ ++ S L++ + + D KK++++ +SSD+GLCG I+S+ K KS + +E V +G+K + IL R Sbjct: 22 VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKADIKVPE----DKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYR 143 The following BLAST results are available for this feature:
BLAST of EY744774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744774 ID=EY744774; Name=EY744774; organism=Citrus sinensis; type=EST; length=1008bpback to top |