EY679826

Overview
NameEY679826
Unique NameEY679826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length962
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679826 vs. ExPASy Swiss-Prot
Match: IRE1_YEAST (Serine/threonine-protein kinase/endoribonuclease IRE1 OS=Saccharomyces cerevisiae GN=IRE1 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 2.024e-17
Identity = 56/166 (33.73%), Postives = 85/166 (51.20%), Query Frame = 2
Query:    5 LFVSNT*IPKGSNGTVVYEGIYEGRPVAVKRLVQALHDVAFKEIQNLIASDQHPNIVRWNGVDNDKDFVYLSLQRYMCSLDDLIPTYSDSSCNSFFGEYQATTAMIEYKLRLDSMKVIIRDLSL*KANGHPSPL*LNLMRDLVSGLVHLRELGIIHRDLHPQNVFI 502
            L VS   +  GS+GTVV++G ++GRPVAVKR++    D+A  EI+ L  SD HPN++R+   +    F+Y++L+    +L DL+                            +S  V   +L L K         ++L+R + SG+ HL  L IIHRDL PQN+ +
Sbjct:  673 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLV----------------------------ESKNVSDENLKLQKEYNP-----ISLLRQIASGVAHLHSLKIIHRDLKPQNILV 805          
BLAST of EY679826 vs. ExPASy Swiss-Prot
Match: PPK4_SCHPO (Serine/threonine-protein kinase ppk4 OS=Schizosaccharomyces pombe GN=ppk4 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.504e-16
Identity = 50/157 (31.85%), Postives = 78/157 (49.68%), Query Frame = 2
Query:   35 GSNGTVVYEGIYEGRPVAVKRLVQALHDVAFKEIQNLIASDQHPNIVRWNGVDNDKDFVYLSLQRYMCSLDDLIPTYSDSSCNSFFGEYQATTAMIEYKLRLDSMKVIIRDLSL*KANGHPSPL*LNLMRDLVSGLVHLRELGIIHRDLHPQNVFII 505
            GS+GT+VY G+YE R VAVKR++   +D+A +EI  L  SD HPNIVR+        F+Y+ ++   C+L DL                      IE  +  D    + + + L           ++L+  +  G+ HL  L ++HRDL PQN+ ++
Sbjct:  663 GSHGTIVYRGVYEDREVAVKRVLMEFYDLASREITLLQQSDNHPNIVRYYCKQKSDQFLYIVIELCKCNLSDL----------------------IEKPIAYDD---LFKSIDL-----------VSLLYQIAFGVSHLHSLDLVHRDLKPQNILLV 783          
BLAST of EY679826 vs. ExPASy Swiss-Prot
Match: IRE1_CAEEL (Serine/threonine-protein kinase/endoribonuclease ire-1 OS=Caenorhabditis elegans GN=ire-1 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 1.040e-13
Identity = 49/156 (31.41%), Postives = 73/156 (46.79%), Query Frame = 2
Query:   35 GSNGTVVYEGIYEGRPVAVKRLVQALHDVAFKEIQNLIASDQHPNIVRWNGVDNDKDFVYLSLQRYMCSLDDLIPTYSDSSCNSFFGEYQATTAMIEYKLRLDSMKVIIRDLSL*KANGHPSPL*LNLMRDLVSGLVHLRELGIIHRDLHPQNVFI 502
            G  GTVVY G ++GR VAVKR+V      A +E   L  SD HP+++R+  +++D  F YL+L+  + SL+D +                      E K    ++ + +RD+                M+    GL HL    I+HRD+ PQNV I
Sbjct:  527 GCEGTVVYRGTFDGREVAVKRVVSEFVKFAHREADLLRESDTHPHVIRYFCMESDSQFRYLALELCIASLNDYV----------------------EQKEVQQNVTIALRDI----------------MKQATDGLAHLHASKIVHRDMKPQNVLI 644          
The following BLAST results are available for this feature:
BLAST of EY679826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
IRE1_YEAST2.024e-1733.73Serine/threonine-protein kinase/endoribonuclease I... [more]
PPK4_SCHPO8.504e-1631.85Serine/threonine-protein kinase ppk4 OS=Schizosacc... [more]
IRE1_CAEEL1.040e-1331.41Serine/threonine-protein kinase/endoribonuclease i... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-004-D10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679826 ID=EY679826; Name=EY679826; organism=Citrus sinensis; type=EST; length=962bp
AAAGTTATTTGTGTCAAATACATAAATACCCAAGGGAAGCAATGGCACTG
TTGTCTATGAGGGAATATATGAAGGTCGACCTGTTGCCGTGAAACGCCTT
GTCCAAGCTCTTCATGATGTGGCTTTTAAAGAAATTCAAAATCTTATTGC
ATCTGATCAACATCCCAATATTGTTCGATGGAACGGGGTGGATAATGATA
AAGATTTCGTGTACCTTTCTCTACAGCGTTACATGTGCAGCTTGGATGAT
TTGATTCCAACTTACTCTGATTCATCTTGCAACTCATTCTTTGGTGAATA
TCAAGCTACTACAGCTATGATTGAGTATAAGCTCCGGCTGGATTCGATGA
AGGTTATTATACGTGATCTTAGCTTGTGAAAAGCAAATGGCCATCCCTCA
CCTCTTTAACTAAACTTGATGAGGGATTTGGTTTCCGGACTTGTACATCT
GCGTGAATTGGGAATAATTCACCGAGACTTGCATCCTCAGAATGTGTTCA
TCATTAGAGGAGATATCATTATGTGCAAAGATTTCTGATGTGGGCATTAC
CACGCGCCTCGTTGGGGGATATGTCTTCTTTGGGTCTTCGGGCTGCCGGT
TGGTGGCAACTCGGGGTTGGGCACCCCCAAACCCACTTTCTTCATGGACG
GGCAGACTCCAGCCTGTTGAATTGGTTAGACTTAGGTTGGGTCCCTGTTT
TTCCAGCAGAGACGGGGGCCCACCATTAATTTGGGAGAACGTCAGGAATA
TCGAAATCAAACTTAACAAAGAACCAAGCGCTCACCCTTTTTTATTGGGG
GGAGTCCCCCCGGAAACCCAAACAATCCTTCTTGCAGGAATGGGTTAGCC
CCCCAAACTACCGATTGCGCACCTTGGGGGGGTGGAGAAGGGCGCCCCCC
TCCCCACCTGCATGGAAAGATCAGACCCAGAAACCCACCTAACTCTTTAA
ACAGGAACAAAA
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