EY744770

Overview
NameEY744770
Unique NameEY744770
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY744770 vs. ExPASy Swiss-Prot
Match: APO3_ARATH (APO protein 3, mitochondrial OS=Arabidopsis thaliana GN=APO3 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.651e-27
Identity = 57/75 (76.00%), Postives = 67/75 (89.33%), Query Frame = 3 
Query:   12 QEATMDDLVGPNYVWHVQD-LNGPALENTLKRYYGKAPAVVELCVHGGAPVPDQYRSMMRLDVVPPERDEVDLVA 233
            QEAT+DD+VGP YVWHV+D  +G  L+N+LKR+YGKAPAV+E+CV GGAPVPDQY SMMRLDVV P+RDEVDLVA
Sbjct:  328 QEATIDDVVGPTYVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPVPDQYNSMMRLDVVYPQRDEVDLVA 402
[Close]
BLAST of EY744770 vs. ExPASy Swiss-Prot
Match: APO1_ARATH (APO protein 1, chloroplastic OS=Arabidopsis thaliana GN=APO1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.139e-20
Identity = 41/74 (55.41%), Postives = 58/74 (78.38%), Query Frame = 3 
Query:   12 QEATMDDLVGPNYVWHVQDLNGPALENTLKRYYGKAPAVVELCVHGGAPVPDQYRSMMRLDVVPPERDEVDLVA 233
            Q+A +D++  PNYVWHV+DL G  L   L+R+YGKAPA+VE+C+H GA VP +Y++MMRLD++ P+  E D+VA
Sbjct:  363 QDALVDEVFPPNYVWHVRDLKGNPLTGNLRRFYGKAPALVEICMHSGARVPQRYKAMMRLDIIVPDSQEADMVA 436
[Close]
BLAST of EY744770 vs. ExPASy Swiss-Prot
Match: APO2_ARATH (APO protein 2, chloroplastic OS=Arabidopsis thaliana GN=APO2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.451e-17
Identity = 38/74 (51.35%), Postives = 53/74 (71.62%), Query Frame = 3 
Query:   12 QEATMDDLVGPNYVWHVQDLNGPALENTLKRYYGKAPAVVELCVHGGAPVPDQYRSMMRLDV-VPPERDEVDLV 230
            Q A +DDL+ P YVWHV D+NGP ++  L+ +YG+APAVVE+C   GA VP+ YR+ MRL+V +P    E ++V
Sbjct:  366 QSAVLDDLIPPRYVWHVPDVNGPPMQRELRSFYGQAPAVVEICAQAGAVVPEHYRATMRLEVGIPSSVKEAEMV 439
The following BLAST results are available for this feature:
BLAST of EY744770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
APO3_ARATH2.651e-2776.00APO protein 3, mitochondrial OS=Arabidopsis thalia... [more]
APO1_ARATH3.139e-2055.41APO protein 1, chloroplastic OS=Arabidopsis thalia... [more]
APO2_ARATH9.451e-1751.35APO protein 2, chloroplastic OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-D01-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744770 ID=EY744770; Name=EY744770; organism=Citrus sinensis; type=EST; length=928bp
CCACGCGTCCGCAAGAAGCAACGATGGATGATCTTGTTGGTCCCAACTAT
GTCTGGCATGTTCAAGATCTGAATGGGCCTGCTTTGGAAAACACCTTGAA
GAGGTATTATGGTAAGGCTCCAGCTGTAGTGGAGCTGTGCGTGCATGGTG
GTGCTCCTGTTCCAGATCAATATAGAAGCATGATGAGATTAGATGTGGTT
CCTCCTGAACGCGATGAAGTTGATCTTGTTGCTTGAAGTAGTTTCGTTTC
AAGCATATGGAATATAGATACACTGACAAGACCATGACCACCGGAGCTTT
GGATGTGACTCTTTATACTGTGATTATGACTTAAAACTGAAATTCTTGGC
TCATTAGCTTGGGAACCAAGCTCTGTTGTGACGGGTTTGTCAAGTTGTGC
CACTTGGGTTGGTCTGGTTTGAGTGGCTTGGATAAATAATATGCCATTTT
TCTGCGGCCTTCCTAATTGAATGGACGACATATGAAATGATGCTACAGAA
ACAGAGTTGATCGGCACTAACCTTAACGGTAAGATCAATTTTGTCCATGA
AGTAGCCACGGGGAATACCTGCGGATAATGATTTACCGGAAAATCTTGAT
GTTTTATATTGATTTCTGACTCCCTCGAAACATATTTTGAAAATCTATTT
TAAGGACCTCCATTGCATAATTAAAAAAAGTCTTTGATTCCGGGCCCCTA
CGAACGATCAGACACAAGCAACAGCAGAAGAGGCACACCGCCGCTGAGCT
CATGACACGTACGACCCTGGTGCCGCGGCGCGCGCGAACAGAGGGACGCC
ACAAATGAGAGGGCCCCGGCCGTGGGGGCACCAAGACGCGGCAGCGAACG
TACACAGTAACAAAGGACAAGGAAAGAACAAAACGAATTCCGTGAGAGAT
GGCATACTGCAACCCGAGAGCAGAAACG
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