EY679798
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679798 vs. ExPASy Swiss-Prot
Match: RH50_ARATH (DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis thaliana GN=RH50 PE=2 SV=2) HSP 1 Score: 275.404 bits (703), Expect = 3.430e-73 Identity = 155/254 (61.02%), Postives = 187/254 (73.62%), Query Frame = 3 Query: 3 ILQLINLRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNKIETCRKVENILKRFDRKETRVRVLPFHAALDQETRLANMKEFTTSRSKE-ARFVSSLH**SISWKLILRV*IMLYSLTFPRDSSE*VPPGWKELPTGAGKETQSLSYLVVGHQVSPPAKGYGEKNHNGPP 761 IL L NLRCAILDEVDILF D++FE ALQ+LI+SSPVTAQYLFVTATLP+EIYNKLVEVFPDC+VVMGP +HR+S LEEFLVDCSGD ++KTPETAF NKK+ALLQ++E++PVSKTI+FCNKIETCRKVENI KR DRKE ++ VLPFHAAL QE+RL NM+EFT+S+ +E + F+ S ++L+ FPRD SE V + GK + VVG QV A+ E+N G P Sbjct: 521 ILGLSNLRCAILDEVDILFGDDEFEAALQNLINSSPVTAQYLFVTATLPLEIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLVDCSGDDNAEKTPETAFQNKKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHVLPFHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFD--FPRDPSEYVRRVGRTARGARGKGKAFI--FVVGKQVG-LARRIIERNEKGHP 769
BLAST of EY679798 vs. ExPASy Swiss-Prot
Match: RH50_ORYSJ (DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica GN=Os03g0108600 PE=2 SV=2) HSP 1 Score: 246.899 bits (629), Expect = 1.307e-64 Identity = 133/253 (52.57%), Postives = 176/253 (69.57%), Query Frame = 3 Query: 6 LQLINLRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNKIETCRKVENILKRFDRKETRVRVLPFHAALDQETRLANMKEFTTSRSKEARFVSSLH**SISWKLILRV*IMLYSLTFPRDSSE*VPPGWKELPTGAGKETQSLSYL-VVGHQVSPPAKGYGEKNHNGPP 761 +QL NLRC +LDEVDIL+ +E FE L LI+ +P+T QYLFVTATLP++IYNK+VE FPDC+++MGPG+HR S LEE LVDCSGD +K PETAF NKKSAL+++IE+SPV KTI+FCNKIETCRKVEN L+R DRK ++++VLPFHAALDQ+ R+AN+KEF ++ ++ F+ S ++L+ +PRD SE V + T G +++ VG QVS A+ E+N G P Sbjct: 388 VQLNNLRCVVLDEVDILYGEESFEQVLHQLITVAPLTTQYLFVTATLPLDIYNKVVETFPDCELIMGPGVHRTSSRLEEILVDCSGDDNEEKNPETAFSNKKSALVKIIEESPVRKTIIFCNKIETCRKVENALRRVDRKASQIKVLPFHAALDQQQRIANIKEFLNKQTADSMFLVCTDRASRGIDFANVNHVVLFD--YPRDPSEYVRRVGR---TARGASGNGKAFVFAVGKQVS-LARRVMERNIKGHP 634 The following BLAST results are available for this feature:
BLAST of EY679798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY679798 ID=EY679798; Name=EY679798; organism=Citrus sinensis; type=EST; length=969bpback to top |