EY679793

Overview
NameEY679793
Unique NameEY679793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679793 vs. ExPASy Swiss-Prot
Match: FRI_PHAVU (Ferritin, chloroplastic OS=Phaseolus vulgaris GN=PFE PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.183e-22
Identity = 48/61 (78.69%), Postives = 56/61 (91.80%), Query Frame = 1
Query:    1 HSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEGDAA 183
            HSVADRN DPQ+A+F+ESEFL EQVEAI KI++YV+QLRMVGKGHG+WHFDQ LLH+G AA
Sbjct:  194 HSVADRNKDPQLADFIESEFLSEQVEAIKKISEYVAQLRMVGKGHGVWHFDQSLLHDGHAA 254          
BLAST of EY679793 vs. ExPASy Swiss-Prot
Match: FRI3_SOYBN (Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.490e-21
Identity = 46/61 (75.41%), Postives = 54/61 (88.52%), Query Frame = 1
Query:    1 HSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEGDAA 183
            HSVA +NND Q+A+F+ESEFLGEQVEAI KI++YV+QLR VGKGHG+WHFDQMLLHE   A
Sbjct:  195 HSVASKNNDVQLADFIESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHEEGVA 255          
BLAST of EY679793 vs. ExPASy Swiss-Prot
Match: FRI3_VIGUN (Ferritin-3, chloroplastic OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.446e-20
Identity = 44/57 (77.19%), Postives = 53/57 (92.98%), Query Frame = 1
Query:    1 HSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE 171
            HSVADRNND Q+A+F+ESEFL EQVE+I KIA+YV+QLR+VGKGHG+WHFDQ LLH+
Sbjct:  200 HSVADRNNDAQLADFIESEFLNEQVESIKKIAEYVTQLRLVGKGHGVWHFDQRLLHD 256          
BLAST of EY679793 vs. ExPASy Swiss-Prot
Match: FRI2_SOYBN (Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.466e-20
Identity = 44/59 (74.58%), Postives = 54/59 (91.53%), Query Frame = 1
Query:    1 HSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEGD 177
            HSVA+RNNDPQ A+F+ESEFL EQV++I KIA+YV+QLR+VGKGHG+WHFDQ LLH+ D
Sbjct:  197 HSVAERNNDPQXADFIESEFLYEQVKSIKKIAEYVAQLRLVGKGHGVWHFDQKLLHDED 255          
BLAST of EY679793 vs. ExPASy Swiss-Prot
Match: FRI2_VIGUN (Ferritin-2, chloroplastic OS=Vigna unguiculata GN=PFE2 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 4.207e-20
Identity = 44/58 (75.86%), Postives = 53/58 (91.38%), Query Frame = 1
Query:    1 HSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEG 174
            HSVA +N D Q+A+FVESEFLGEQVE+I +I++YV+QLR VGKGHG+WHFDQMLLHEG
Sbjct:  189 HSVATKNGDVQLADFVESEFLGEQVESIKRISEYVAQLRRVGKGHGVWHFDQMLLHEG 246          
BLAST of EY679793 vs. ExPASy Swiss-Prot
Match: FRI_MALXI (Ferritin, chloroplastic OS=Malus xiaojinensis PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.494e-20
Identity = 44/55 (80.00%), Postives = 51/55 (92.73%), Query Frame = 1
Query:    1 HSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLL 165
            HSVADRNNDPQMA+F+ESEFL EQVE+I KI++YV+QLR VGKGHG+WHFDQ LL
Sbjct:  195 HSVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKGHGVWHFDQRLL 249          
BLAST of EY679793 vs. ExPASy Swiss-Prot
Match: FRI4_SOYBN (Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 5.494e-20
Identity = 46/62 (74.19%), Postives = 56/62 (90.32%), Query Frame = 1
Query:    1 HSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE-GDAA 183
            HSVA +N D Q+A+FVE+E+LGEQVEAI +I++YV+QLR VGKGHG+WHFDQMLLHE GDAA
Sbjct:  186 HSVATKNGDVQLADFVETEYLGEQVEAIKRISEYVAQLRRVGKGHGVWHFDQMLLHEGGDAA 247          
BLAST of EY679793 vs. ExPASy Swiss-Prot
Match: FRI1_SOYBN (Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4)

HSP 1 Score: 98.5969 bits (244), Expect = 5.494e-20
Identity = 44/55 (80.00%), Postives = 51/55 (92.73%), Query Frame = 1
Query:    1 HSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLL 165
            HSVADRNNDPQMA+F+ESEFL EQVE+I KI++YV+QLR VGKGHG+WHFDQ LL
Sbjct:  195 HSVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKGHGVWHFDQRLL 249          
BLAST of EY679793 vs. ExPASy Swiss-Prot
Match: FRI1_ARATH (Ferritin-1, chloroplastic OS=Arabidopsis thaliana GN=FER1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.494e-20
Identity = 42/56 (75.00%), Postives = 51/56 (91.07%), Query Frame = 1
Query:    1 HSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLH 168
            H VA  NNDPQ+A+FVESEFLGEQ+EAI KI+ Y++QLRM+GKGHG+WHFDQMLL+
Sbjct:  200 HKVASENNDPQLADFVESEFLGEQIEAIKKISDYITQLRMIGKGHGVWHFDQMLLN 255          
BLAST of EY679793 vs. ExPASy Swiss-Prot
Match: FRI1_BRANA (Ferritin-1, chloroplastic OS=Brassica napus GN=LSC30 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.599e-19
Identity = 42/56 (75.00%), Postives = 51/56 (91.07%), Query Frame = 1
Query:    1 HSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLH 168
            H VA  NNDPQ+A+FVESEFLGEQ+EAI KI+ +++QLRMVGKGHG+WHFDQMLL+
Sbjct:  199 HRVASENNDPQLADFVESEFLGEQIEAIKKISDFITQLRMVGKGHGVWHFDQMLLN 254          
The following BLAST results are available for this feature:
BLAST of EY679793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
FRI_PHAVU1.183e-2278.69Ferritin, chloroplastic OS=Phaseolus vulgaris GN=P... [more]
FRI3_SOYBN6.490e-2175.41Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI3_VIGUN1.446e-2077.19Ferritin-3, chloroplastic OS=Vigna unguiculata PE=... [more]
FRI2_SOYBN2.466e-2074.58Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI2_VIGUN4.207e-2075.86Ferritin-2, chloroplastic OS=Vigna unguiculata GN=... [more]
FRI_MALXI5.494e-2080.00Ferritin, chloroplastic OS=Malus xiaojinensis PE=3... [more]
FRI4_SOYBN5.494e-2074.19Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2[more]
FRI1_SOYBN5.494e-2080.00Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4[more]
FRI1_ARATH5.494e-2075.00Ferritin-1, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI1_BRANA1.599e-1975.00Ferritin-1, chloroplastic OS=Brassica napus GN=LSC... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-004-A10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679793 ID=EY679793; Name=EY679793; organism=Citrus sinensis; type=EST; length=939bp
CACAGTGTGGCGGATAGAAACAATGATCCCCAAATGGCAGAGTTTGTCGA
GAGTGAATTTTTGGGTGAGCAGGTTGAAGCAATTAACAAGATCGCAAAAT
ATGTTTCTCAACTGAGGATGGTTGGGAAAGGCCACGGATTATGGCACTTC
GATCAAATGCTTCTCCACGAGGGTGATGCTGCATGATGAAGAACCATATT
GTTACATTTCTTTGTGCTTTAGTCAACTCTTTTCTGCCAAATGTTCTGAA
GTATCTCTGCCACAGGAGGTTGAGTGTGTTGACAAAAAATAAGCTGAAAC
AGTGTTAAGTCCTACAAAGTTAATACTCAATAGCCTCCTTGCTTTATCAT
ATTAGTGTGGTCGCATTTAGATAGTCTTTTTGATGGTGCTTTTTCTTTAT
TTAGTAACAGACTGTGTGAAGGGATCTAATAGTTTAAGCAGAGCACCAAA
TCCATCTTCTGATTGTATAAATATAATTAAGTTGTTCAATAAAAGTTCTG
TTTCTGCCTAAAAAAAAAAAAAAACAAAAAAAAAAGACAAAAACACAGAA
GAAAAAAACAAACAAAAAAACAAAGGGGGGGGGCCGCCCTAAAAGAAACA
AACTAAAGTACCCGGGATTGCAAGTTCTAACTTTTTCTAAAGGGTACCCA
AATTCAATTCCCGGGCGCGTCTTTTTCCAACCTCCTGGACGGGGAAAAAC
CCGGGGGCTTCCCACACTTTAAGCCCCTTGGCGCCACTCCCCCTTTCCCA
ACCTGGGGAAAAAACGAAAAAGCCCCCCCCAGCACGCCCATCCCCAAGAT
GTTGGCGACCCACGAAGGGGCGAAGAGGGGAACCCCCCCCCGGTAACCCC
GCATTAAAGAACCGGCGGGGGGGGGGGGAGTATACGACCCCGGATGACAC
CACTACCAAAGTATCACGTGCCCGCTACCACCCCCCCTA
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