EY679777

Overview
NameEY679777
Unique NameEY679777
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1005
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679777 vs. ExPASy Swiss-Prot
Match: CCD1_ARATH (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Arabidopsis thaliana GN=CCD1 PE=1 SV=2)

HSP 1 Score: 291.197 bits (744), Expect = 9.056e-83
Identity = 137/169 (81.07%), Postives = 152/169 (89.94%), Query Frame = 3
Query:   63 KVIDFVEKLIVKWMYDSSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMKIGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYQHGKLLALSEADKPY 569
            K++D +E+L+VK M+D+S PLHYLSGNFAP+ DETPP KDL V G LP+CLNGEFVRVGPNPKF  VAGYHWFDGDGMIHG+RIKDGKATYVSR+V+TSRLKQEEFFG AKFMKIGDLKG FGLLMVN+Q LR KLK+LD +YGNGTANTALVY HGKLLAL EADKPY
Sbjct:   25 KLLDLLERLVVKLMHDASLPLHYLSGNFAPIRDETPPVKDLPVHGFLPECLNGEFVRVGPNPKFDAVAGYHWFDGDGMIHGVRIKDGKATYVSRYVKTSRLKQEEFFGAAKFMKIGDLKGFFGLLMVNVQQLRTKLKILDNTYGNGTANTALVYHHGKLLALQEADKPY 193          

HSP 2 Score: 36.5798 bits (83), Expect = 9.056e-83
Identity = 15/22 (68.18%), Postives = 21/22 (95.45%), Query Frame = 1
Query:  574 VKVLENGDLQTLGMLD*DKKIT 639
            +KVLE+GDLQTLG++D DK++T
Sbjct:  195 IKVLEDGDLQTLGIIDYDKRLT 216          
BLAST of EY679777 vs. ExPASy Swiss-Prot
Match: CCD1_PEA (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum GN=CCD1 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 5.818e-82
Identity = 152/207 (73.43%), Postives = 167/207 (80.68%), Query Frame = 3
Query:   63 KVIDFVEKLIVKWMYDSSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMKIGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYQHGKLLALSEADKPYARQSSGKWRSANTGYA*LGQENNNFPFMAIQKVDPYPG 683
            K +D +EK+IVK  YDSS P H+LSGNFAPV DETPP KDL V GHLPDCLNGEFVRVGPNPKF+PVAGYHWFDGDGMIHGLRIKDGKA+YVSRFV+TSR KQEE+F G+KFMKIGDLKGLFGLLMVNMQMLRAKLK+LDVSYG+GTANTALVY H KLLALSE DKPYA +          G     +   +  F A  KVDP+ G
Sbjct:   25 KAVDLLEKIIVKLFYDSSLPHHWLSGNFAPVKDETPPVKDLTVQGHLPDCLNGEFVRVGPNPKFSPVAGYHWFDGDGMIHGLRIKDGKASYVSRFVKTSRFKQEEYFNGSKFMKIGDLKGLFGLLMVNMQMLRAKLKILDVSYGHGTANTALVYHHQKLLALSEGDKPYAIKVFEDGDLQTLGMLDYDKRLGH-NFTAHPKVDPFTG 230          

HSP 2 Score: 22.3274 bits (46), Expect = 5.818e-82
Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 2
Query:   20 LLAVDPKPKNGVT 58
            +L V+PKP NG T
Sbjct:   11 ILEVEPKPSNGFT 23          
BLAST of EY679777 vs. ExPASy Swiss-Prot
Match: CCD1_PHAVU (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Phaseolus vulgaris GN=CCD1 PE=1 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 1.291e-81
Identity = 154/207 (74.40%), Postives = 167/207 (80.68%), Query Frame = 3
Query:   63 KVIDFVEKLIVKWMYDSSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMKIGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYQHGKLLALSEADKPYARQSSGKWRSANTGYA*LGQENNNFPFMAIQKVDPYPG 683
            KVID +EKL+VK++YDSS P HYL+GNF PV  ETPPTKDL V GHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFV TSRLKQEE+FG +KFMKIGDLKGLFGLLMVN+ MLR KLKVLD+SYG GT NTALVY HGKLLALSEADKPYA +          G     +   +  F A  KVDP+ G
Sbjct:   28 KVIDLLEKLLVKFLYDSSLPHHYLTGNFGPVT-ETPPTKDLPVKGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVETSRLKQEEYFGRSKFMKIGDLKGLFGLLMVNIHMLRTKLKVLDLSYGGGTTNTALVYHHGKLLALSEADKPYAIKVFEDGDLQTLGMLDYDKRLGH-SFTAHPKVDPFTG 232          

HSP 2 Score: 23.0978 bits (48), Expect = 1.291e-81
Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 2
Query:    8 ARNALLAVDPKPKNG 52
            A   L+ VDPKP NG
Sbjct:   10 AEGGLVKVDPKPTNG 24          
BLAST of EY679777 vs. ExPASy Swiss-Prot
Match: CCD_CROSA (Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Crocus sativus GN=CCD PE=1 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 3.130e-80
Identity = 132/167 (79.04%), Postives = 145/167 (86.83%), Query Frame = 3
Query:   69 IDFVEKLIVKWMYDSSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMKIGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYQHGKLLALSEADKPY 569
            +D +EK +V   +D S+P HYLSGNFAPV DETPP  DL V GHLP+CLNGEFVRVGPNPKF PVAGYHWFDGDGMIHG+RIKDGKATY SR+V+TSRLKQEE+F G KFMKIGDLKG FGL MV MQ+LRAKLKV+DVSYG GT NTAL+Y HGKLLALSEADKPY
Sbjct:   31 VDLIEKAVVYLFHDKSKPCHYLSGNFAPVVDETPPCPDLPVRGHLPECLNGEFVRVGPNPKFMPVAGYHWFDGDGMIHGMRIKDGKATYASRYVKTSRLKQEEYFEGPKFMKIGDLKGFFGLFMVQMQLLRAKLKVIDVSYGVGTGNTALIYHHGKLLALSEADKPY 197          

HSP 2 Score: 36.5798 bits (83), Expect = 3.130e-80
Identity = 16/22 (72.73%), Postives = 21/22 (95.45%), Query Frame = 1
Query:  574 VKVLENGDLQTLGMLD*DKKIT 639
            VKVLE+GDLQTLG+LD DK+++
Sbjct:  199 VKVLEDGDLQTLGLLDYDKRLS 220          
BLAST of EY679777 vs. ExPASy Swiss-Prot
Match: NCED5_ARATH (Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic OS=Arabidopsis thaliana GN=NCED5 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.346e-33
Identity = 73/173 (42.20%), Postives = 105/173 (60.69%), Query Frame = 3
Query:   69 IDFVEKLIV-----KWMYDSSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMK-IGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYQHGKLLALSEADKPY 569
            +DF E  ++     K +  +  P H +SGN+APVP+++  +  L V G +PDC++G ++R G NP F PV+G+H FDGDGM+H ++I +G A+Y  RF  T RL QE+  G   F K IG+L G  G+  + +   R    +L+   G G AN  LVY H +LLA+SE D PY
Sbjct:   87 LDFAETALLRRERSKPLPKTVDPRHQISGNYAPVPEQSVKSS-LSVDGKIPDCIDGVYLRNGANPLFEPVSGHHLFDGDGMVHAVKITNGDASYSCRFTETERLVQEKQLGSPIFPKAIGELHGHSGIARLMLFYARGLFGLLNHKNGTGVANAGLVYFHDRLLAMSEDDLPY 258          

HSP 2 Score: 27.7202 bits (60), Expect = 1.346e-33
Identity = 10/26 (38.46%), Postives = 20/26 (76.92%), Query Frame = 1
Query:  574 VKVLENGDLQTLGMLD*DKKITTFLL 651
            V+V +NGDL+T+G  D D ++++ ++
Sbjct:  260 VRVTDNGDLETIGRFDFDGQLSSAMI 285          
BLAST of EY679777 vs. ExPASy Swiss-Prot
Match: NCED3_ARATH (9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic OS=Arabidopsis thaliana GN=NCED3 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 5.433e-32
Identity = 69/157 (43.95%), Postives = 99/157 (63.06%), Query Frame = 3
Query:  111 SSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMK-IGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYQHGKLLALSEADKPYARQ 578
            ++ P   ++GNFAPV +E P  ++L V+G LPD + G +VR G NP   PV G+H+FDGDGM+H ++ + G A+Y  RF +T+R  QE   G   F K IG+L G  G+  + +   RA   ++D ++G G AN  LVY +G+LLA+SE D PY  Q
Sbjct:  116 TADPSVQIAGNFAPV-NEQPVRRNLPVVGKLPDSIKGVYVRNGANPLHEPVTGHHFFDGDGMVHAVKFEHGSASYACRFTQTNRFVQERQLGRPVFPKAIGELHGHTGIARLMLFYARAAAGIVDPAHGTGVANAGLVYFNGRLLAMSEDDLPYQVQ 271          

HSP 2 Score: 24.2534 bits (51), Expect = 5.433e-32
Identity = 9/26 (34.62%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  574 VKVLENGDLQTLGMLD*DKKITTFLL 651
            V++  NGDL+T+G  D D ++ + ++
Sbjct:  270 VQITPNGDLKTVGRFDFDGQLESTMI 295          
BLAST of EY679777 vs. ExPASy Swiss-Prot
Match: NCED1_MAIZE (9-cis-epoxycarotenoid dioxygenase 1, chloroplastic OS=Zea mays GN=VP14 PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 9.212e-32
Identity = 73/155 (47.10%), Postives = 98/155 (63.23%), Query Frame = 3
Query:  111 SSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKA-TYVSRFVRTSRLKQEEFFGGAKFMK-IGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYQHGKLLALSEADKPY 569
            ++ P   ++GNFAPV  E PP  +L V G +P  ++G + R G NP F PVAG+H FDGDGM+H LRI++G A +Y  RF  T+RL+QE   G   F K IG+L G  G+  + +   RA   ++D S G G AN  LVY +G+LLA+SE D PY
Sbjct:  116 TADPAVQIAGNFAPV-GERPPVHELPVSGRIPPFIDGVYARNGANPCFDPVAGHHLFDGDGMVHALRIRNGAAESYACRFTETARLRQERAIGRPVFPKAIGELHGHSGIARLALFYARAACGLVDPSAGTGVANAGLVYFNGRLLAMSEDDLPY 269          

HSP 2 Score: 23.483 bits (49), Expect = 9.212e-32
Identity = 9/21 (42.86%), Postives = 16/21 (76.19%), Query Frame = 1
Query:  574 VKVLENGDLQTLGMLD*DKKI 636
            V+V ++GDL+T+G  D D ++
Sbjct:  271 VRVADDGDLETVGRYDFDGQL 291          
BLAST of EY679777 vs. ExPASy Swiss-Prot
Match: NCED1_PHAVU (9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic OS=Phaseolus vulgaris GN=NCED1 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.865e-31
Identity = 83/214 (38.79%), Postives = 121/214 (56.54%), Query Frame = 3
Query:   69 IDFVEKLIVKWMYDSSQPLH-------YLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMK-IGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYQHGKLLALSEADKPYARQSSGKWRSANTG-YA*LGQENNNFPFMAIQKVDPYPG 683
            +D VE  +V   ++S  PL         ++GNFAPVP+     + L V+G +P C++G +VR G NP + PVAG+H+FDGDGM+H ++  +G A+Y  RF  T RL QE+  G   F K IG+L G  G+  + +   R+  +++D S+G G AN  LVY +  LLA+SE D PY  + +        G Y   GQ N+    +A  K+DP  G
Sbjct:  116 LDMVETALVS--HESKHPLPKTADPKVQIAGNFAPVPEHAAD-QALPVVGKIPKCIDGVYVRNGANPLYEPVAGHHFFDGDGMVHAVKFTNGAASYACRFTETQRLAQEKSLGRPVFPKAIGELHGHSGIARLLLFYARSLFQLVDGSHGMGVANAGLVYFNNHLLAMSEDDLPYHVRITSNGDLTTVGRYDFNGQLNST--MIAHPKLDPVNG 324          
BLAST of EY679777 vs. ExPASy Swiss-Prot
Match: NCED2_ARATH (9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic OS=Arabidopsis thaliana GN=NCED2 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 7.620e-31
Identity = 70/173 (40.46%), Postives = 104/173 (60.12%), Query Frame = 3
Query:   69 IDFVEKLIVKWMYDS-----SQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMK-IGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYQHGKLLALSEADKPY 569
            ID  E+ ++    DS     + P   ++GN++PVP E+   ++L V G +PDC++G ++R G NP F P AG+H FDGDGM+H ++I +G A+Y  RF +T RL QE+  G   F K IG+L G  G+  + +   R    +++   G G AN  LVY + +LLA+SE D PY
Sbjct:   80 IDAAERALISHEQDSPLPKTADPRVQIAGNYSPVP-ESSVRRNLTVEGTIPDCIDGVYIRNGANPMFEPTAGHHLFDGDGMVHAVKITNGSASYACRFTKTERLVQEKRLGRPVFPKAIGELHGHSGIARLMLFYARGLCGLINNQNGVGVANAGLVYFNNRLLAMSEDDLPY 251          

HSP 2 Score: 24.6386 bits (52), Expect = 7.620e-31
Identity = 9/26 (34.62%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  574 VKVLENGDLQTLGMLD*DKKITTFLL 651
            +K+ + GDLQT+G  D D ++ + ++
Sbjct:  253 LKITQTGDLQTVGRYDFDGQLKSAMI 278          
BLAST of EY679777 vs. ExPASy Swiss-Prot
Match: NCED6_ARATH (9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic OS=Arabidopsis thaliana GN=NCED6 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.068e-29
Identity = 71/161 (44.10%), Postives = 100/161 (62.11%), Query Frame = 3
Query:  114 SQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIK-DGKATYVSRFVRTSRLKQEEFFGGAKFMK-IGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYQHGKLLALSEADKPYARQSSGK 590
            + P   LSGNFAPV +E P    L V+G +P CL G ++R G NP F P+AG+H FDGDGMIH + I  D + +Y  R+ +T+RL QE   G + F K IG+L G  GL  + +   RA + ++D + G G AN  +V+ +G+LLA+SE D PY  +  G+
Sbjct:   95 TDPAVQLSGNFAPV-NECPVQNGLEVVGQIPSCLKGVYIRNGANPMFPPLAGHHLFDGDGMIHAVSIGFDNQVSYSCRYTKTNRLVQETALGRSVFPKPIGELHGHSGLARLALFTARAGIGLVDGTRGMGVANAGVVFFNGRLLAMSEDDLPYQVKIDGQ 254          

HSP 2 Score: 20.7866 bits (42), Expect = 1.068e-29
Identity = 9/26 (34.62%), Postives = 16/26 (61.54%), Query Frame = 1
Query:  574 VKVLENGDLQTLGMLD*DKKITTFLL 651
            VK+   GDL+T+G    D +I + ++
Sbjct:  249 VKIDGQGDLETIGRFGFDDQIDSSVI 274          
The following BLAST results are available for this feature:
BLAST of EY679777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
CCD1_ARATH9.056e-8381.07Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=... [more]
CCD1_PEA5.818e-8273.43Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=... [more]
CCD1_PHAVU1.291e-8174.40Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=... [more]
CCD_CROSA3.130e-8079.04Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Cr... [more]
NCED5_ARATH1.346e-3342.20Probable 9-cis-epoxycarotenoid dioxygenase NCED5, ... [more]
NCED3_ARATH5.433e-3243.959-cis-epoxycarotenoid dioxygenase NCED3, chloropla... [more]
NCED1_MAIZE9.212e-3247.109-cis-epoxycarotenoid dioxygenase 1, chloroplastic... [more]
NCED1_PHAVU5.865e-3138.799-cis-epoxycarotenoid dioxygenase NCED1, chloropla... [more]
NCED2_ARATH7.620e-3140.469-cis-epoxycarotenoid dioxygenase NCED2, chloropla... [more]
NCED6_ARATH1.068e-2944.109-cis-epoxycarotenoid dioxygenase NCED6, chloropla... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-003-H06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679777 ID=EY679777; Name=EY679777; organism=Citrus sinensis; type=EST; length=1005bp
CGTCGTAGCACGAAATGCCCTTTTGGCGGTGGATCCGAAACCGAAGAATG
GAGTGACTCCTTAAAGTGATAGACTTTGTGGAGAAACTGATAGTGAAGTG
GATGTACGATTCTTCACAGCCTCTTCATTATCTCTCCGGTAACTTCGCTC
CAGTTCCTGACGAGACTCCTCCTACTAAAGACCTCCACGTCATCGGCCAT
CTCCCCGATTGCTTGAATGGGGAGTTTGTCAGGGTTGGTCCTAATCCCAA
GTTTGCCCCTGTGGCCGGATACCACTGGTTTGATGGAGATGGCATGATTC
ATGGTCTGCGCATCAAAGACGGAAAGGCTACATATGTCTCCCGTTTTGTG
AGGACTTCACGTCTTAAACAGGAAGAATTTTTCGGAGGTGCTAAATTTAT
GAAGATTGGAGACCTTAAGGGGCTATTTGGATTACTCATGGTTAACATGC
AAATGCTTAGAGCAAAGTTGAAAGTACTGGATGTTTCATATGGAAATGGG
ACAGCTAATACAGCTCTTGTATATCAACATGGGAAACTTCTAGCGCTCTC
AGAGGCGGACAAACCATATGCCCGTCAAAGTTCTGGAAAATGGAGATCTG
CAAACACTGGGTATGCTTGACTAGGACAAGAAAATAACAACTTTCCTTTT
ATGGCCATCCAAAAGGTGGATCCATATCCTGGGCGAGAAGGTTTACCTTT
GGGATATGCCAACCCCCCACCATATAATCCAAATAAAAAATTATTTTAAA
AGGGAGGGTTTCATGGGATGGATCCTGGAACCAATAACCGGTAATAAAAA
CCCCATCGGGGAGGCCGAGAATTTGGAAATTAAAGGAGAAATTTATGGCT
ATTTTTTGGGGGGATTTTCCCCGCGTGGTGTTTTCCAAAACGGAAGGAGA
ATTGGGGGGAAAAAGAAAAAACATGCTTGTATATTTTCAACTTTTTTTGG
GGAAAGCAAAAAAAAAGTGCTTTGGTTTTTTTGGGTTTTTTTTTTTCTTC
CCCCC
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