EY679774

Overview
NameEY679774
Unique NameEY679774
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length978
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 1.359e-93
Identity = 177/237 (74.68%), Postives = 193/237 (81.43%), Query Frame = 2
Query:   65 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766
            MATSTMALSSS F GKAV L+PS +E++  GR++MRKT +K+   SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMG +EG + + GGPLGEV DP      +FDPLG    +      LKVKE KN +    S   FF  AI
Sbjct:    1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR-IAGGPLGEVVDPLYPG-GSFDPLGLA-DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 234          
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 1.359e-93
Identity = 177/237 (74.68%), Postives = 194/237 (81.86%), Query Frame = 2
Query:   65 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766
            MA STMALSS SF GKAV L+PS +E++  G+++MRKT SK+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMG +EG + + GGPLGEV DP      +FDPLG   ++      LKVKE KN +    S   FF  AI
Sbjct:    1 MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR-VAGGPLGEVVDPLYPG-GSFDPLGLA-EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 234          
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 1.359e-93
Identity = 175/236 (74.15%), Postives = 192/236 (81.36%), Query Frame = 2
Query:   65 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766
            MA ST ALSS F GKAV L+PS +E++  G+++MRKT SK+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMG +EG + + GGPLGEV DP      +FDPLG   ++      LKVKE KN +    S   FF  AI
Sbjct:    1 MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR-VAGGPLGEVVDPLYPG-GSFDPLGLA-EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 233          
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 1.503e-92
Identity = 174/235 (74.04%), Postives = 190/235 (80.85%), Query Frame = 2
Query:   65 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766
            MA +TMALSS SF G+AV L+PS +E+S  GRI+MRK  +KS  S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMG +EG + + GGPLGEV DP      +FDPLG   ++      LKVKE KN +    S   FF  AI
Sbjct:    1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR-IAGGPLGEVVDPLYPG-GSFDPLGLA-EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 232          
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 1.503e-92
Identity = 173/235 (73.62%), Postives = 191/235 (81.28%), Query Frame = 2
Query:   65 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766
            MA +TMALSS SF G+AV L+PS  E++  GR+SMRKT +K V+S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMG +EG + + GGPLGEV DP      +FDPLG   ++      LKVKE KN +    S   FF  AI
Sbjct:    1 MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR-VAGGPLGEVVDPLYPG-GSFDPLGLA-EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 232          
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 4.372e-92
Identity = 172/236 (72.88%), Postives = 191/236 (80.93%), Query Frame = 2
Query:   65 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766
            MA ST ALSS F GKAV L+PS +E++  G+++MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMG +EG + + G PLGEV DP      +FDPLG   ++      LKVKE KN +    S   FF  A+
Sbjct:    1 MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR-VAGEPLGEVVDPLYPG-GSFDPLGLA-EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAL 233          
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 1.272e-91
Identity = 173/237 (73.00%), Postives = 193/237 (81.43%), Query Frame = 2
Query:   65 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766
            MA +TMALSSS F GKAV L+PS +E++  G+++MRKT +K+  +SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMG +EG + + GGPLGEV DP      +FDPLG   ++      LKVK  KN +    S   FF  AI
Sbjct:    1 MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR-VAGGPLGEVVDPLYPG-GSFDPLGLA-EDPEAFAELKVKHIKNGRLAMFSMFGFFVQAI 234          
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 2.834e-91
Identity = 174/237 (73.42%), Postives = 189/237 (79.75%), Query Frame = 2
Query:   65 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766
            M  STMALSS SF G AV L+PS +E++  G+  MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMG +EG + + GGPLGEV DP      +FDPLG    +      LKVKE KN +    S   FF  AI
Sbjct:    1 MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYR-VAGGPLGEVTDPLYPG-GSFDPLGLA-DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 234          
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 1.077e-90
Identity = 174/234 (74.36%), Postives = 188/234 (80.34%), Query Frame = 2
Query:   68 ATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766
            A S+MALSS S  GKAV L PS  E+   GR+SMRKT +K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QV+LMG +EG + + GGPLGEV DP +    +FDPLG    +      LKVKE KN +    S   FF  AI
Sbjct:    3 AASSMALSSPSLAGKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYR-IAGGPLGEVTDP-IYPGGSFDPLGLA-DDPEAFAELKVKELKNGRLAMFSMFGFFVQAI 230          
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.407e-90
Identity = 173/237 (73.00%), Postives = 188/237 (79.32%), Query Frame = 2
Query:   65 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSK--SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766
            MA+STMALSS S  GKAV L P+ +E+   GRI+MRKT  K  +V S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMG +EG + + GGPLGEV DP      +FDPLG    +      LKVKE KN +    S   FF  AI
Sbjct:    1 MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR-IAGGPLGEVVDPLYPG-GSFDPLGLA-DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 234          
The following BLAST results are available for this feature:
BLAST of EY679774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
CB2G_SOLLC1.359e-9374.68Chlorophyll a-b binding protein 3C, chloroplastic ... [more]
CB24_TOBAC1.359e-9374.68Chlorophyll a-b binding protein 40, chloroplastic ... [more]
CB21_TOBAC1.359e-9374.15Chlorophyll a-b binding protein 16, chloroplastic ... [more]
CB2B_SOLLC1.503e-9274.04Chlorophyll a-b binding protein 1B, chloroplastic ... [more]
CB22_TOBAC1.503e-9273.62Chlorophyll a-b binding protein 21, chloroplastic ... [more]
CB25_NICPL4.372e-9272.88Chlorophyll a-b binding protein E, chloroplastic O... [more]
CB25_TOBAC1.272e-9173.00Chlorophyll a-b binding protein 50, chloroplastic ... [more]
CB27_TOBAC2.834e-9173.42Chlorophyll a-b binding protein 7, chloroplastic O... [more]
CB23_SOYBN1.077e-9074.36Chlorophyll a-b binding protein 3, chloroplastic O... [more]
CB2A_SPIOL1.407e-9073.00Chlorophyll a-b binding protein, chloroplastic OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-003-H03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679774 ID=EY679774; Name=EY679774; organism=Citrus sinensis; type=EST; length=978bp
CCACGCGTCCGCCCACGCGTCCGCTCGAACACTAGAGCTCACCAACAACT
CCGATCATTGTAAAATGGCAACCTCGACCATGGCTCTCTCCTCATCATTC
GTCGGCAAGGCTGTGAACCTTGCCCCTTCAGGCAATGAGCTGAGCAATGG
TGGCCGCATCTCCATGCGTAAAACCGGGAGCAAGTCTGTTTCTTCAGGTA
GCCCGTGGTACGGCCCGGACAGAGTCAAGTACTTGGGTCCATTCTCTGGC
GAGCCCCCAAGCTACTTGACTGGTGAGTTCCCTGGTGACTACGGTTGGGA
CACTGCTGGGCTTTCAGCTGACCCAGAAACCTTTGCCAAGAACCGTGAAC
TCGAAGTCATCCACTGCAGATGGGCCATGTTGGGAGCTCTTGGATGCGTC
TTCCCGGAGCTCTTGGCCCGCAACGGAGTCAAGTTCGGTGAGGCCGTGTG
GTTCAAGGCGGGGGCCCAGATCTTCAGCGAGGGCGGGCTTGACTACTTGG
GGAACCCAAGCCTGATCCACGCTCAAAGCATCTTGGCCATCTGGGCTTTG
CAGGTGGTCTTGATGGGAACCCTTGAGGGGTTACAGAATTTGCTGGGAGG
GCCCCTCGGTGAAGTGAACGACCCTTTTGTAACCCAGGTGGACACTTTTG
ATCCATTGGGGTTTGGGCGGAAGAACGGAAGGCTTTTACCTAACTTAAAG
GTTAAGGAAAACAAAAATGCAAAGTTTGGCTATATCTCCAATGTTTGGTT
TTTCAATTCAGCCATTAACCACAAGAAAGGGAACGGATAAAAAAACTGAC
CAAACCCTTTGTTAAATCCTTTACATAATTATAGCAACGGGGAAACATAC
AAATACTTATATCCCTGTGAAAATAGACTAATCGTTAAAAAAGAAAATTT
CTCACTCTTACGTGTTCTACGGTAAAAAAACATAAATCCCTAAAATTTAA
ACACCCTGAGCGAAGAAATTTTCAAATT
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