EY679763

Overview
NameEY679763
Unique NameEY679763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1014
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8225 contig Csv1_Contig8225:896..1906. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY679763 vs. ExPASy Swiss-Prot
Match: IDH5_ARATH (Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial OS=Arabidopsis thaliana GN=IDH5 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.491e-45
Identity = 87/105 (82.86%), Postives = 100/105 (95.24%), Query Frame = 2
Query:   26 IISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 340
            IISDLCAGL+GGLGLTPSCNIGE G+ALAEAVHGSAPDIAGKNLANPTALLLS V MLRHL+ +++A++I +AI++TIAEGKYRTADLGGSSTT++FTKAICDHL
Sbjct:  270 IISDLCAGLVGGLGLTPSCNIGEDGVALAEAVHGSAPDIAGKNLANPTALLLSGVMMLRHLKFNEQAEQIHSAIINTIAEGKYRTADLGGSSTTTEFTKAICDHL 374          
BLAST of EY679763 vs. ExPASy Swiss-Prot
Match: IDH6_ARATH (Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial OS=Arabidopsis thaliana GN=IDH6 PE=1 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 7.929e-44
Identity = 88/105 (83.81%), Postives = 98/105 (93.33%), Query Frame = 2
Query:   26 IISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 340
            IISDLCAGL+GGLGLTPS NIGE GIALAEAVHGSAPDIAG NLANPTALLLS V MLRHL+L+ +A++I +AI++TIAEGKYRTADLGGSSTT+DFTKAICDHL
Sbjct:  270 IISDLCAGLVGGLGLTPSMNIGEDGIALAEAVHGSAPDIAGMNLANPTALLLSGVMMLRHLKLNKQAEQIHSAIINTIAEGKYRTADLGGSSTTTDFTKAICDHL 374          
BLAST of EY679763 vs. ExPASy Swiss-Prot
Match: LEU3_SOLTU (3-isopropylmalate dehydrogenase, chloroplastic OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 7.188e-37
Identity = 78/82 (95.12%), Postives = 80/82 (97.56%), Query Frame = 2
Query:   26 IISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGK 271
            IISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSV+MLRHLELHDKADRIQ+AIL TIA GK
Sbjct:  263 IISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVSMLRHLELHDKADRIQDAILKTIAGGK 344          
BLAST of EY679763 vs. ExPASy Swiss-Prot
Match: IDHA_DICDI (Isocitrate dehydrogenase [NAD] regulatory subunit A, mitochondrial OS=Dictyostelium discoideum GN=idhA PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.188e-31
Identity = 67/98 (68.37%), Postives = 82/98 (83.67%), Query Frame = 2
Query:   26 IISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFT 319
            I+SDLCAGLIGGLGLTPS NIGE G A+ EAVHG+APDIAGKN ANPTAL+LSS+ MLRHL    +A  I+NA+L+T+ EGK +T DLGG+S+ S++T
Sbjct:  244 IVSDLCAGLIGGLGLTPSGNIGENGSAIFEAVHGTAPDIAGKNKANPTALILSSIMMLRHLGHFHEASIIENAVLNTLTEGKVKTGDLGGNSSCSEYT 341          
BLAST of EY679763 vs. ExPASy Swiss-Prot
Match: IDH3A_BOVIN (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Bos taurus GN=IDH3A PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.188e-31
Identity = 67/102 (65.69%), Postives = 83/102 (81.37%), Query Frame = 2
Query:   26 IISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 331
            I+SDLCAGLIGGLG+TPS NIG  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A +I+ A  +TI +GK  T DLGG+S  SDFT+ IC
Sbjct:  258 ILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAAKIETACFATIKDGKSLTKDLGGNSKCSDFTEEIC 359          
BLAST of EY679763 vs. ExPASy Swiss-Prot
Match: IDH3A_PONAB (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Pongo abelii GN=IDH3A PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.026e-31
Identity = 67/102 (65.69%), Postives = 83/102 (81.37%), Query Frame = 2
Query:   26 IISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 331
            I+SDLCAGLIGGLG+TPS NIG  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A RI+ A  +TI +GK  T DLGG++  SDFT+ IC
Sbjct:  258 ILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEIC 359          
BLAST of EY679763 vs. ExPASy Swiss-Prot
Match: IDH3A_MACFA (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (Fragment) OS=Macaca fascicularis GN=IDH3A PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 2.026e-31
Identity = 67/102 (65.69%), Postives = 83/102 (81.37%), Query Frame = 2
Query:   26 IISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 331
            I+SDLCAGLIGGLG+TPS NIG  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A RI+ A  +TI +GK  T DLGG++  SDFT+ IC
Sbjct:  239 ILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEIC 340          
BLAST of EY679763 vs. ExPASy Swiss-Prot
Match: IDH3A_HUMAN (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Homo sapiens GN=IDH3A PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.026e-31
Identity = 67/102 (65.69%), Postives = 83/102 (81.37%), Query Frame = 2
Query:   26 IISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 331
            I+SDLCAGLIGGLG+TPS NIG  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A RI+ A  +TI +GK  T DLGG++  SDFT+ IC
Sbjct:  258 ILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEIC 359          
BLAST of EY679763 vs. ExPASy Swiss-Prot
Match: IDH3A_DROME (Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Drosophila melanogaster GN=l(1)G0156 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.455e-31
Identity = 69/105 (65.71%), Postives = 83/105 (79.05%), Query Frame = 2
Query:   26 IISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 340
            I+SD+CAGL+GGLGLTPS N+G  G AL E+VHG+APDIAGK+LANPTALLLS+V MLRH+EL+  AD+I+ A   TI EGKY T DLGG +  S+FT  IC  L
Sbjct:  274 ILSDMCAGLVGGLGLTPSGNMGLNG-ALFESVHGTAPDIAGKDLANPTALLLSAVMMLRHMELNTYADKIERAAFETIKEGKYLTGDLGGRAKCSEFTNEICAKL 377          
BLAST of EY679763 vs. ExPASy Swiss-Prot
Match: IDH3A_MOUSE (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Mus musculus GN=Idh3a PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.513e-31
Identity = 66/102 (64.71%), Postives = 83/102 (81.37%), Query Frame = 2
Query:   26 IISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 331
            I+SDLCAGLIGGLG+TPS NIG  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A +I+ A  +TI +GK  T DLGG++  SDFT+ IC
Sbjct:  258 ILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAAKIEAACFATIKDGKSLTKDLGGNAKCSDFTEEIC 359          
The following BLAST results are available for this feature:
BLAST of EY679763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
IDH5_ARATH5.491e-4582.86Isocitrate dehydrogenase [NAD] catalytic subunit 5... [more]
IDH6_ARATH7.929e-4483.81Isocitrate dehydrogenase [NAD] catalytic subunit 6... [more]
LEU3_SOLTU7.188e-3795.123-isopropylmalate dehydrogenase, chloroplastic OS=... [more]
IDHA_DICDI1.188e-3168.37Isocitrate dehydrogenase [NAD] regulatory subunit ... [more]
IDH3A_BOVIN1.188e-3165.69Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]
IDH3A_PONAB2.026e-3165.69Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]
IDH3A_MACFA2.026e-3165.69Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]
IDH3A_HUMAN2.026e-3165.69Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]
IDH3A_DROME3.455e-3165.71Probable isocitrate dehydrogenase [NAD] subunit al... [more]
IDH3A_MOUSE4.513e-3164.71Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-003-G04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679763 ID=EY679763; Name=EY679763; organism=Citrus sinensis; type=EST; length=1014bp
CCCACGCGTCCGCCCACCCGTTCGCATCATTAGTGACCTATGTGCTGGGT
TGATTGGTGGATTGGGCTTAACACCTAGTTGCAATATTGGGGAAGGAGGA
ATTGCCCTTGCTGAAGCTGTTCATGGTTCAGCACCTGATATTGCTGGAAA
GAATTTGGCAAATCCAACTGCTTTGCTGTTGAGTTCGGTAACAATGTTGC
GCCATTTGGAGCTCCATGACAAGGCTGATAGGATCCAAAATGCTATCCTG
AGCACAATTGCAGAGGGGAAGTATCGAACTGCAGATCTTGGTGGCTCTTC
AACGACATCAGATTTCACAAAGGCAATCTGCGATCATCTTTAAATATTTC
TTTCTACATAGAATTTGAATTCATGTTCAAGATTTACATTCTACCTTTCT
TTTTTTGAGCAATGTCTCAAATTTGTTTTTTCCCCCCCTTTTTAAAGTGT
TTTTCTTTGAGGGGAATGAGACCCATCACCTTGGTGACTATGTAGAAGTT
TTTTTCTGATGAAACTGTTCAGCCAGAGTGGATATGGCCCGTCCTCAAAA
AAGGTATTTAAACGGCAATATTTATTTTCCTTGCTGCCTGTGAAATTCCA
AAAATTTGAACTACCCGATTTTGAAAAAATTGGTTCACCGCGTGTGGTGG
CCAAAGTTTCCATATTTTTTGATAATTGGGTTTCTGTACCATGAAAAAAA
GCCCACTTCTTGTGGGTGTGGAAAAAACCAAAACACTCACAAAAAAAGCA
CAAAGAAAAAAAAAAAATCAAAAAAGGGGGGGGCGCCCCCCCTAAAAGAA
TCAAAACCTAAACGATCACGGAGGGCGGCGAACCTCCAAAATCTCTATCA
AAAGGGGCCCCTTTAAATTCATTTTCCCAGGGAGCGCCCTTTTTTAACAC
CAGCCCGGCCCCGCGGAAAAACCCCGTGGGCGTTTCCCCCCACTTTATAT
CTCCCCTTTTTGACACACCACTCCACCCCCTTTTTTTCCGCCCAATGGGG
GGAAACAGAAAAAA
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