EY744758

Overview
NameEY744758
Unique NameEY744758
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length942
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY744758 vs. ExPASy Swiss-Prot
Match: PRF1_SOLLC (36.4 kDa proline-rich protein OS=Solanum lycopersicum GN=TPRP-F1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.588e-11
Identity = 35/81 (43.21%), Postives = 43/81 (53.09%), Query Frame = 1 
Query:  184 IDTLKLGACVDLLGGLVHIGLGDPVVNQCCPVLQGLVELEAAVXXXXXXXXXXXXXXXXXXXXXXXXV-TCGKTPPAGFTC 423
            ID LKLGACVD+LGGL+HIG+G      CCP+L GLV+L+AA+                        +  CGK PP  F C
Sbjct:  263 IDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDLDAAICLCTTIRLKLLNINIILPIALQVLIDDCGKYPPKDFKC 343
The following BLAST results are available for this feature:
BLAST of EY744758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PRF1_SOLLC3.588e-1143.2136.4 kDa proline-rich protein OS=Solanum lycopersi... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-C01-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744758 ID=EY744758; Name=EY744758; organism=Citrus sinensis; type=EST; length=942bp
CCACGCGTCCGCTTGCCACCAGTCACTCTCCCTCCGGTGACCGTCCCGCC
GATCAAGCCACCAGTCGACCTCCCCACTCTCCCACCAGTTACACTGCCTC
CAGTTCTCCCTAACCCACCAAGTGCTAGGAAGCCATGCCCATGTTCATAC
ACACCACCTCCACCAGCTGCTGCCACATGCCCCATTGACACCCTCAAATT
GGGTGCTTGTGTGGACCTTCTTGGTGGGTTGGTTCACATTGGTCTTGGTG
ACCCAGTTGTTAACCAATGCTGCCCAGTTCTACAAGGACTTGTTGAGTTA
GAAGCTGCTGTCTGCTTGTGCACTACTCTCAAGCTCAAGCTGCTTAATCT
TAACATCTATCTTCCACTTGCTCTTCAGCTTCTTGTCACTTGCGGAAAGA
CACCACCCGCTGGTTTCACTTGCACTCTTTAGATCTAAGGTTGGTAGATT
GATGATGGATACTGAAGGAAGAAATCGACATGAAAGGATGTCGAGACTTA
TTTGTTTGTTTCTTTTTCTCTCTCCCCCACTCTCTCTGTCTTTCTCTCAT
TGTTGGGATTGTAATGTTTGGTCACATTTAATTGTACACCCATTTGTTTT
TATATGATTTGTCCCATTGAATGTGTGTTTTCAATGTCCTTGAAAAGGCA
ACCTAAAACAAGAAAGAAAAAGTGCGAACAACAGCACCGAAGACACACCA
GAACAAACAACAAACGGGGGGGCCCCCTCTAAAAGAAACCAACCTTTACT
TACCCCGCGTTGGCCAAACTCTAAATCTCTTTTTAAAAAAGGGTACCCAA
AAATTACATTCAAGGGGGCCGCAGTTTTTAAAAAAACGTTGGAAAAGGGG
GAAAAACCCGGGGGATTAACCACTAAATATAACCGCCTTTCGCCACCAAC
ACCCCCCTTTTTCCCACACAATGGGGGCAAAAAACGAAAAAA
back to top