EY679753

Overview
NameEY679753
Unique NameEY679753
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1009
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679753 vs. ExPASy Swiss-Prot
Match: TIC_ARATH (Protein TIME FOR COFFEE OS=Arabidopsis thaliana GN=TIC PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 9.111e-24
Identity = 95/250 (38.00%), Postives = 121/250 (48.40%), Query Frame = 3 
Query:  108 TADSRVSRANMNIYGQNFAMTLPPPNFAFXXXXXXXXXXXXXXXXXXXXXXXX----AGVDSVSPQTFAMTFAPINGAATAPGFDISSIAHNPALLQSLPEAFRHNYQIVXXXXXXXXKKNYRVSEE-----SKNGGHDASNA-EEERKSMTGKPPATV----GQSIAFS-RQDLTDAQVSAMTSNTVLDSSTRTLNLVSVPAPE*CFIYACFYEQWPMLLLRNNQLQRIHQQMMASSKPPAFWLLPPQE 812
            TADSR SR+N+  YGQN+ M + P N                               AGV+S     +AMTFA  NGA TAP  ++SSIA N A+  S+PEA R  YQ++        K NY  S E     S  G   A+N  EE+RKS  G    T     GQSIAFS +QDL DA VSA+TS +++DSS+R LNL S        +    ++Q    LL+  Q Q  H Q   S +P     L  Q+
Sbjct:  965 TADSRGSRSNV-AYGQNYGMQMQPTNLGLMSSPAPGGGVVGSSSSHGEKKSQQQVSKAGVESFQSPGYAMTFATFNGANTAPTLNMSSIAQNHAMFHSMPEAARQGYQMM-AAQAAQQKMNYGASLEDGKSGSIGGAATANNTPEEQRKSGGGAIGKTSGGNGGQSIAFSNKQDLADASVSAVTSGSIVDSSSRLLNLGSALPQSSGSLPTSHHQQ----LLQQQQQQ--HMQRSQSQQPYTTMYLQKQQ 1206
The following BLAST results are available for this feature:
BLAST of EY679753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TIC_ARATH9.111e-2438.00Protein TIME FOR COFFEE OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-003-F05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679753 ID=EY679753; Name=EY679753; organism=Citrus sinensis; type=EST; length=1009bp
ACCAACCTCAACTACCCATTCAGCAGCGGCAACAACAACAGAACCAACAA
GCTCCTCATCAAGCTCGCCAGCCTGAGAGTGAAATGGGTGGCGAAGAGAG
CCCATCAACTGCTGATAGTCGTGTATCTCGTGCAAATATGAACATTTATG
GCCAAAATTTTGCAATGACTTTACCCCCACCAAACTTTGCTTTTATGACT
ACTGCATCAATGAGTGGTGCCACTAGTACATCTGAAAAGAAGCCGCAGCA
ACAGCAGAGCTCCAAGGCTGGAGTTGATTCTGTGTCACCTCAAACTTTTG
CAATGACATTTGCTCCTATTAATGGTGCTGCTACAGCTCCTGGGTTTGAC
ATTTCTTCCATTGCACATAATCCTGCTCTTCTTCAGAGCCTTCCAGAGGC
TTTTAGGCATAACTACCAGATTGTGGCTGCTGCCCAGGCAGCACAGCAGA
AAAAGAATTACCGTGTTTCTGAAGAAAGCAAAAATGGAGGTCATGATGCT
TCTAATGCGGAAGAAGAAAGAAAGTCGATGACTGGAAAACCACCTGCAAC
TGTTGGGCAGTCCATTGCTTTCTCAAGGCAGGATTTAACTGATGCACAGG
TTTCTGCAATGACAAGCAACACTGTACTTGATAGTTCAACACGAACCCTT
AACCTTGTTTCTGTGCCTGCCCCGGAGTAATGTTTCATTTATGCCTGCTT
CTATGAGCAATGGCCAATGCTTCTGCTGCGCAACAACCAACTGCAGCGAA
TTCACCAACAAATGATGGCTTCTTCAAAACCACCAGCATTTTGGCTGCTG
CCCCCCCAAGAAAACCAAAAACCCCACCAACCAATTAAAGGAAATGTTTT
TACCCCGGACCCTCCTCCCTGGGCTCCACCTTTGGGGTGCGAAATTTTCC
CCAAAAAACCTTTTGTCCGTTATTTTTCCCCAAAAAAACCTTTTTCCCAA
AAGATAACCCCCCCCCCCCCCCCTTCCCCAATCTCCCCCCCGCAGGGGGG
GAAAAAAAA
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