EY679751

Overview
NameEY679751
Unique NameEY679751
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1024
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679751 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 6.499e-86
Identity = 160/224 (71.43%), Postives = 184/224 (82.14%), Query Frame = 3
Query:  108 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVFDGSR*GFTELLEGPLGEVTDPIVTQVGNFDPLGFG*KTGKAFC*AQGLRKSRMEKLGNGSPGLVSSF 773
            F GKAV L+PS +E++  G+++MRKTASK+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVV  G+  G+  +  GPLGEV DP+    G+FDPLG   +  +AF       + +++++ NG   + S F
Sbjct:   13 FAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGY-RVAGGPLGEVVDPLYPG-GSFDPLGLA-EDPEAFA------ELKVKEIKNGRLAMFSMF 227          
BLAST of EY679751 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 8.488e-86
Identity = 160/224 (71.43%), Postives = 184/224 (82.14%), Query Frame = 3
Query:  108 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVFDGSR*GFTELLEGPLGEVTDPIVTQVGNFDPLGFG*KTGKAFC*AQGLRKSRMEKLGNGSPGLVSSF 773
            F GKAV L+PS +E++  G+++MRKTASK+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVV  G+  G+  +  GPLGEV DP+    G+FDPLG   +  +AF       + +++++ NG   + S F
Sbjct:   12 FAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGY-RVAGGPLGEVVDPLYPG-GSFDPLGLA-EDPEAFA------ELKVKEIKNGRLAMFSMF 226          
BLAST of EY679751 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 2.470e-85
Identity = 153/190 (80.53%), Postives = 168/190 (88.42%), Query Frame = 3
Query:  108 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVFDGSR*GFTELLEGPLGEVTDPIVTQVGNFDPLG 671
            F GKAV L+PS +E++  GR++MRKTA+K+   SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVV  G+  G+  +  GPLGEV DP+    G+FDPLG
Sbjct:   13 FAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGY-RIAGGPLGEVVDPLYPG-GSFDPLG 200          
BLAST of EY679751 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 4.213e-85
Identity = 157/222 (70.72%), Postives = 179/222 (80.63%), Query Frame = 3
Query:  108 FVGKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVFDGSR*GFTELLEGPLGEVTDPIVTQVGNFDPLGFG*KTGKAFC*AQGLRKSRMEKLGNGSPGLVSSF 773
            F G+AV L+PS +E+S  GRI+MRK  +KS  S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVV  G+  G+  +  GPLGEV DP+    G+FDPLG   +  +AF       + +++++ NG   + S F
Sbjct:   13 FAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGY-RIAGGPLGEVVDPLYPG-GSFDPLGLA-EDPEAFA------ELKVKEIKNGRLAMFSMF 225          
BLAST of EY679751 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 4.213e-85
Identity = 156/222 (70.27%), Postives = 180/222 (81.08%), Query Frame = 3
Query:  108 FVGKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVFDGSR*GFTELLEGPLGEVTDPIVTQVGNFDPLGFG*KTGKAFC*AQGLRKSRMEKLGNGSPGLVSSF 773
            F G+AV L+PS  E++  GR+SMRKT +K V+S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+  G+  G+  +  GPLGEV DP+    G+FDPLG   +  +AF       + +++++ NG   + S F
Sbjct:   13 FAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGY-RVAGGPLGEVVDPLYPG-GSFDPLGLA-EDPEAFA------ELKVKEIKNGRLAMFSMF 225          
BLAST of EY679751 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 4.213e-85
Identity = 159/220 (72.27%), Postives = 179/220 (81.36%), Query Frame = 3
Query:  114 GKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVFDGSR*GFTELLEGPLGEVTDPIVTQVGNFDPLGFG*KTGKAFC*AQGLRKSRMEKLGNGSPGLVSSF 773
            G+AV L+P+  E+    + +MRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVV  G+  G+  +  GPLGEVTDPI    G+FDPLG      +AF       + ++++L NG   + S F
Sbjct:    5 GQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGY-RIAGGPLGEVTDPIYPG-GSFDPLGLA-DDPEAFA------ELKVKELKNGRLAMFSMF 215          
BLAST of EY679751 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 1.226e-84
Identity = 159/224 (70.98%), Postives = 183/224 (81.70%), Query Frame = 3
Query:  108 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVFDGSR*GFTELLEGPLGEVTDPIVTQVGNFDPLGFG*KTGKAFC*AQGLRKSRMEKLGNGSPGLVSSF 773
            F GKAV L+PS +E++  G+++MRKTA+K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVV  G+  G+    E PLGEV DP+    G+FDPLG   +  +AF       + +++++ NG   + S F
Sbjct:   12 FAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGE-PLGEVVDPLYPG-GSFDPLGLA-EDPEAFA------ELKVKEIKNGRLAMFSMF 226          
BLAST of EY679751 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 1.601e-84
Identity = 151/190 (79.47%), Postives = 168/190 (88.42%), Query Frame = 3
Query:  108 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVFDGSR*GFTELLEGPLGEVTDPIVTQVGNFDPLG 671
            F GKAV L+PS +E++  G+++MRKT +K+  +SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVV  G+  G+  +  GPLGEV DP+    G+FDPLG
Sbjct:   13 FAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGY-RVAGGPLGEVVDPLYPG-GSFDPLG 200          
BLAST of EY679751 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 4.658e-84
Identity = 152/190 (80.00%), Postives = 166/190 (87.37%), Query Frame = 3
Query:  108 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVFDGSR*GFTELLEGPLGEVTDPIVTQVGNFDPLG 671
            F G AV L+PS +E++  G+  MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVV  G+  G+  +  GPLGEVTDP+    G+FDPLG
Sbjct:   13 FAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGY-RVAGGPLGEVTDPLYPG-GSFDPLG 200          
BLAST of EY679751 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 2.312e-83
Identity = 160/220 (72.73%), Postives = 177/220 (80.45%), Query Frame = 3
Query:  114 GKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVFDGSR*GFTELLEGPLGEVTDPIVTQVGNFDPLGFG*KTGKAFC*AQGLRKSRMEKLGNGSPGLVSSF 773
            GKAV L PS  E+   GR+SMRKT +K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QV+  G+  G+  +  GPLGEVTDPI    G+FDPLG      +AF       + ++++L NG   + S F
Sbjct:   16 GKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGY-RIAGGPLGEVTDPIYPG-GSFDPLGLA-DDPEAFA------ELKVKELKNGRLAMFSMF 223          
The following BLAST results are available for this feature:
BLAST of EY679751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CB24_TOBAC6.499e-8671.43Chlorophyll a-b binding protein 40, chloroplastic ... [more]
CB21_TOBAC8.488e-8671.43Chlorophyll a-b binding protein 16, chloroplastic ... [more]
CB2G_SOLLC2.470e-8580.53Chlorophyll a-b binding protein 3C, chloroplastic ... [more]
CB2B_SOLLC4.213e-8570.72Chlorophyll a-b binding protein 1B, chloroplastic ... [more]
CB22_TOBAC4.213e-8570.27Chlorophyll a-b binding protein 21, chloroplastic ... [more]
CB21_CUCSA4.213e-8572.27Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB25_NICPL1.226e-8470.98Chlorophyll a-b binding protein E, chloroplastic O... [more]
CB25_TOBAC1.601e-8479.47Chlorophyll a-b binding protein 50, chloroplastic ... [more]
CB27_TOBAC4.658e-8480.00Chlorophyll a-b binding protein 7, chloroplastic O... [more]
CB23_SOYBN2.312e-8372.73Chlorophyll a-b binding protein 3, chloroplastic O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-003-F03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679751 ID=EY679751; Name=EY679751; organism=Citrus sinensis; type=EST; length=1024bp
CCACGCGTCCGGCTTCTCTTGCTTACACAGCTTCTCTTGCTTACCCAGCT
TCTGCTTCTCAATTAAATTCCTCAATGGCAACCTCAACAATGGCTCTCTC
CTCATCATTCGTCGGCAAGGCCGTGAACCTCGCCCCTTCAGGCAATGAGC
TAAGCAATGGTGGCCGCATCTCCATGCGTAAAACCGCGAGCAAGTCTGTT
TCTTCAGGTAGCCCGTGGTACGGCCCAGACAGAGTCAAGTACTTGGGCCC
ATTCTCTGGCGAGCCCCCAAGCTACTTGACCGGTGAGTTCCCTGGCGACT
ACGGTTGGGACACAGCCGGGCTTTCAGCTGACCCAGAAACCTTTGCCAAG
AACCGTGAACTCGAAGTCATCCACTGCAGATGGGCCATGTTGGGAGCTCT
TGGATGCGTCTTCCCGGAGCTCTTGGCCCGCAACGGAGTCAAGTTCGGTG
AGGCCGTGTGGTTCAAGGCGGGAGCCCAGATCTTCAGCGAGGGCGGGCTA
GACTACTTGGGAAACCCAAGCTTGATCCACGCCCAGAGCATCTTGGCCAT
CTGGGCTTGCCAAGTGGTCTTTGATGGGAGCCGTTGAGGGTTTACAGAAT
TGCTGGAGGGGCCGCTCGGTGAAGTGACTGACCCCATTGTAACCCAGGTG
GGCAACTTTGATCCATTGGGTTTTGGCTGAAAAACCGGGAAGGCTTTTTG
CTAAGCTCAAGGTTTAAGGAAATCAAGAATGGAAAAGTTGGGCAATGGTT
CTCCAGGTTTGGTTTCTTCCTTTCAGGCCAATTGTCCACCGGCAAGGGAC
ACGTATAAAAAACTTTGGCCAAACATTTGGCCAAACACCGTCCTAAAATA
ATAGGTCGGGGGCTATCGCCCCCCATTTTTTGGCCCCCGGAAAATGGAAT
TCTTCGTTAAAAAAACTTATTATTAGACTGGGAAAATTCGAATATAAAAA
AAAGGAATTGTGGGTTTATAGGTGCGTATAACTCTGTTTTTCCCATATTT
TCAACAAAAGACATGTGGAAAAAT
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