EY744754

Overview
NameEY744754
Unique NameEY744754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY744754_ssr47 microsatellite EY744754_ssr47:47..58. BLAST: Citrus ESTs to Prunus persica proteins V1
EY744754_ssr63 microsatellite EY744754_ssr63:63..72. BLAST: Citrus ESTs to Prunus persica proteins V1
EY744754_ssr77 microsatellite EY744754_ssr77:77..86. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY744754 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 1.023e-26
Identity = 69/178 (38.76%), Postives = 104/178 (58.43%), Query Frame = 3
Query:  186 IGVNYGRIANNLPSASKVVQLLKSQGIERVKVFDTDAAVLKALSGSGIKVTVDLPNELLFSAAKRPSFAFSWVQKNVAAYHPDTQIEAIGVGNEVFVDPHNTTKFLLPAMKNVHEALVKYNLHSSIKVSSP----IALERFAKFLTVISRIFPNPNWIEPLFQPIVEFPPAQPGPFLM 707
            IGVN G    N+PS ++VV LLKSQ I RV+++D D ++L A + +G++V + +PN+ L   ++  + A +WV +NVAAY+P T I  I VG+EV     N    L+ A+K +  ALV  NL   IKVS+P    I L+ F       S+ F N  W +P+  P+++F  +   P L+
Sbjct:   23 IGVNIGTEVTNMPSPTQVVALLKSQNINRVRLYDADRSMLLAFAHTGVQVIISVPNDQLLGISQSNATAANWVTRNVAAYYPATNITTIAVGSEVLTSLTNAASVLVSALKYIQAALVTANLDRQIKVSTPHSSTIILDSFPP-----SQAFFNKTW-DPVIVPLLKFLQSTGSPLLL 194          
BLAST of EY744754 vs. ExPASy Swiss-Prot
Match: GUB_NICPL (Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 5.078e-26
Identity = 72/184 (39.13%), Postives = 104/184 (56.52%), Query Frame = 3
Query:  177 AGSIGVNYGRIANNLPSASKVVQLLKSQGIERVKVFDTDAAVLKALSGSGIKVTVDLPNELLFSAAKRPSFAFSWVQKNVAAYHPDTQIEAIGVGNEV--FVDPHNTTKFLLPAMKNVHEALVKYNLHSSIKVSSPIALERFAKFLTVISRIFPNP-----NWIEPLFQPIVEFPPAQPGPFLM 707
            A S+GV YG + NNLP AS+VVQL KS+ I R++++D + A L+AL GS I+V + +PN  L + A  PS A +WVQ+NV  + P  +   I VGNEV       + T++LLPAM+N+  A+    L ++IKVSS +        +T+I   FP       N +     PI+ F      P L+
Sbjct:   30 AQSVGVCYGMLGNNLPPASQVVQLYKSKNIRRMRLYDPNQAALQALRGSNIEVMLGVPNSDLQNIAANPSNANNWVQRNVRNFWPAVKFRYIAVGNEVSPVTGTSSLTRYLLPAMRNIRNAISSAGLQNNIKVSSSVD-------MTLIGNSFPPSQGSFRNDVRSFIDPIIGFVRRINSPLLV 206          
BLAST of EY744754 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.078e-26
Identity = 65/163 (39.88%), Postives = 97/163 (59.51%), Query Frame = 3
Query:  174 DAGSIGVNYGRIANNLPSASKVVQLLKSQGIERVKVFDTDAAVLKALSGSGIKVTVDLPNELLFSAAKRPSFAFSWVQKNVAAYHPDTQIEAIGVGNEVFVDPHNTTKFLLPAMKNVHEALVKYNLHSSIKVSSPIALERFAKFLTVISRIFPNPNWIEPLFQ 662
            +A  IGVN G    N+P  S +V LLKSQ I  V+++D ++ +LKA + + I+V V + NE +    + PS A +WV KNVAAY P T I AI VG+EV     +    L  A+ N+H+ALV  NL+  +KVSSP++++   K     +  F +P+W   ++Q
Sbjct:   22 NAAFIGVNIGTDLTNMPPPSDIVTLLKSQQITHVRLYDANSHMLKAFANTSIEVMVGVTNEEILKIGRFPSAAAAWVNKNVAAYIPSTNITAIAVGSEVLTTIPHVAPILASALNNIHKALVASNLNFKVKVSSPMSMDIMPKPFPPSTSTF-SPSWNTTVYQ 183          
BLAST of EY744754 vs. ExPASy Swiss-Prot
Match: E1311_ARATH (Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana GN=At1g32860 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.520e-25
Identity = 71/185 (38.38%), Postives = 107/185 (57.84%), Query Frame = 3
Query:  183 SIGVNYGRIANNLPSASKVVQLLKSQGIERVKVFDTDAAVLKALSGSGIKVTVDLPNELLFSAAKRPSFAFSWVQKNVAAYHPDTQIEAIGVGNEVF-VDPHNTTKFLLPAMKNVHEALVKYNLHSSIKVSSPIALERFAKFLTVISRIFP------NPNWIEPLFQPIVEFPPAQPGPFLMGQW 716
            SIGVNYG+I +NLPS + V+ L+KS G  +VK++D +  +LKA S +GI+  + L NE L S  K PS A +W+++NV  + P T I  I +GNE+  ++  + T  LLPAM+ VH AL+   L   I V++       A  L+++   FP       P+ ++ L  PI+EF      PFL+  +
Sbjct:   28 SIGVNYGQIGDNLPSPTDVIPLIKSIGATKVKLYDANPQILKAFSNTGIEFIIGLGNEYL-SKMKDPSKALTWIKQNVTPFLPATNITCITIGNEILALNDSSLTTNLLPAMQGVHSALITAGLSDQISVTT-------AHSLSILKSSFPPSAGEFQPDLLDSL-TPILEFHRKTDSPFLINAY 203          
BLAST of EY744754 vs. ExPASy Swiss-Prot
Match: E13E_HORVU (Glucan endo-1,3-beta-glucosidase GV OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 5.615e-25
Identity = 70/173 (40.46%), Postives = 97/173 (56.07%), Query Frame = 3
Query:  189 GVNYGRIANNLPSASKVVQLLKSQGIERVKVFDTDAAVLKALSGSGIKVTVDLPN-ELLFSAAKRPSFAFSWVQKNVAAYHPDTQIEAIGVGNEVFVDPHNTTKFLLPAMKNVHEALVKYNLHSSIKVSSPIALERFAKFLTVISRIFPNPNWIEPLFQPIVEFPPAQPGPFL 704
            GV YG + +NLPS S VVQL KS+ I  +++++ D   L AL GSGI + +D+   + +    + PS+A  WV+ NV AY+PD  I  I VGNEV   P   T  +L AM+NVH AL   NL SSIKVS+ +  +         S +F +P+ +     PI  F  +   PFL
Sbjct:    6 GVCYGMVGDNLPSRSDVVQLYKSRNIHAMRIYNPDQEALTALRGSGIFLILDVGGVDEVRRLGRDPSYAAGWVRSNVQAYYPDVLIRYIAVGNEV---PAGDTGIILLAMQNVHNALASANLSSSIKVSTAVRFDVITNSFPPSSGVFRDPSGL----VPIARFLDSTGAPFL 171          
BLAST of EY744754 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.615e-25
Identity = 63/177 (35.59%), Postives = 102/177 (57.63%), Query Frame = 3
Query:  177 AGSIGVNYGRIANNLPSASKVVQLLKSQGIERVKVFDTDAAVLKALSGSGIKVTVDLPNELLFSAAKRPSFAFSWVQKNVAAYHPDTQIEAIGVGNEVFVDPHNTTKFLLPAMKNVHEALVKYNLHSSIKVSSPIALERFAKFLTVISRIFPNPNWIEPLFQPIVEFPPAQPGPFLM 707
            A  IG+ YGR A+NLPS ++V +L++   I+ V+++D +  VLKA + +GI++ + +PN  L + A+  S   +W+  N+  Y+P T+I +I VG EV   P N T  +LPAM+N+H AL K  L   IK+SS  +L   ++     S  F   +      +P++EF      PF++
Sbjct:   24 ASKIGICYGRNADNLPSPNRVSELIQHLNIKFVRIYDANIDVLKAFANTGIELMIGVPNADLLAFAQFQSNVDTWLSNNILPYYPSTKITSISVGLEVTEAPDNATGLVLPAMRNIHTALKKSGLDKKIKISSSHSLAILSRSFPPSSASFSKKH--SAFLKPMLEFLVENESPFMI 198          
BLAST of EY744754 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.753e-24
Identity = 58/138 (42.03%), Postives = 89/138 (64.49%), Query Frame = 3
Query:  174 DAGS-IGVNYGRIANNLPSASKVVQLLKSQGIERVKVFDTDAAVLKALSGSGIKVTVDLPNELLFSAAKRPSFAFSWVQKNVAAYHPDTQIEAIGVGNEVFVDPHNTTKFLLPAMKNVHEALVKYNLHSSIKVSSPIA 584
            D GS IGVN G   +++P  ++VV LLK+Q I  +++++ D  +L AL+ +GIKV + +PN+ L    +  S A +WV++NV A++P T I A+ VG+EV     N    L+ A+KNVH AL+  NL   IKVS+P++
Sbjct:   27 DEGSYIGVNIGTDLSDMPHPTQVVALLKAQEIRHIRLYNADPGLLIALANTGIKVIISIPNDQLLGIGQSNSTAANWVKRNVIAHYPATMITAVSVGSEVLTSLSNAAPVLVSAIKNVHAALLSANLDKLIKVSTPLS 164          
BLAST of EY744754 vs. ExPASy Swiss-Prot
Match: E1310_ARATH (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.753e-24
Identity = 78/211 (36.97%), Postives = 111/211 (52.61%), Query Frame = 3
Query:  183 SIGVNYGRIANNLPSASKVVQLLKSQGIERVKVFDTDAAVLKALSGSGIKVTVDLPNELLFSAAKRPSFAFSWVQKNVAAYHPDTQIEAIGVGNEVFVDPHNT-TKFLLPAMKNVHEALVKYNLHSSIKVSSPIALERFAKFLTVISRIFPNPNWIEPLFQPIVEFPPAQPG--PFLMGQWLTHFSPYEIKTLEPLPF*NNPFLFREKPPR 806
            SIG+NYG++ANNLP    V+ LLKS G  +VK++D D   L+A +GSG ++TV L NE L +    P  A  WV++NV AY P+T+I AI VGNEV     +  T  L PAM+++H ALV   L+  I V++       A  L ++                 V +PP+       L+G  LT    + +KT  P+     PF   E+ P+
Sbjct:   26 SIGINYGQVANNLPPPKNVIPLLKSVGATKVKLYDADPQALRAFAGSGFELTVALGNEYL-AQMSDPIKAQGWVKENVQAYLPNTKIVAIVVGNEVLTSNQSALTAALFPAMQSIHGALVDCGLNKQIFVTT-------AHSLAILD----------------VSYPPSATSFRRDLLGS-LTPILDFHVKTGSPILINAYPFFAYEENPK 211          
BLAST of EY744754 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.024e-23
Identity = 66/183 (36.07%), Postives = 108/183 (59.02%), Query Frame = 3
Query:  180 GSIGVNYGRIANNLPSASKVVQLLKSQGIERVKVFDTDAAVLKALSGSGIKVTVDLPNELLFSAAKRPSFAFSWVQKNVAAYHPDTQIEAIGVGNEVFVDPH-NTTKFLLPAMKNVHEALVKYNLHSSIKVSSPIALERFAKFLTVISRIFP------NPNWIEPLFQPIVEFPPAQPGPFLM 707
            G +GV YGR A++LP+ SKVVQL++   I+ V+++D ++ VLKA   + I++ + +PN  L + ++  S   +W++ +V  Y+P T+I  I VG E   DPH N + F++PAM+NV  AL K  L   IKVS+ ++       L ++SR FP      N ++     +P++EF      PF++
Sbjct:   24 GKVGVCYGRSADDLPTPSKVVQLIQQHNIKYVRIYDYNSQVLKAFGNTSIELMIGVPNSDLNAFSQSQSNVDTWLKNSVLPYYPTTKITYITVGAESTDDPHINASSFVVPAMQNVLTALRKVGLSRRIKVSTTLS-------LGILSRSFPPSAGAFNSSYAY-FLRPMLEFLAENKSPFMI 198          
BLAST of EY744754 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.608e-22
Identity = 56/132 (42.42%), Postives = 87/132 (65.91%), Query Frame = 3
Query:  186 IGVNYGRIANNLPSASKVVQLLKSQGIERVKVFDTDAAVLKALSGSGIKVTVDLPNELLFSAAKRPSFAFSWVQKNVAAYHPDTQIEAIGVGNEVFV--DPHNTTKFLLPAMKNVHEALVKYNLHSSIKVSS 575
            IGVNYG++A+NLP  S+ V+LL+S  I++V+++  D A++KAL+G+G+ + +   N  + S A  P+ A  W+  NV  ++P ++I  I VGNE+ +  DP N    LLPAM+NV +AL   +L   IKVS+
Sbjct:   26 IGVNYGQVADNLPPPSETVKLLQSTSIQKVRLYGADPAIIKALAGTGVGIVIGAANGDVPSLASDPNAATQWINSNVLPFYPASKIMLITVGNEILMSNDP-NLVNQLLPAMQNVQKALEAVSLGGKIKVST 156          
The following BLAST results are available for this feature:
BLAST of EY744754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
E133_ARATH1.023e-2638.76Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
GUB_NICPL5.078e-2639.13Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2... [more]
E134_ARATH5.078e-2639.88Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
E1311_ARATH2.520e-2538.38Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis... [more]
E13E_HORVU5.615e-2540.46Glucan endo-1,3-beta-glucosidase GV OS=Hordeum vul... [more]
E1312_ARATH5.615e-2535.59Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E132_ARATH4.753e-2442.03Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
E1310_ARATH4.753e-2436.97Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis... [more]
E1313_ARATH4.024e-2336.07Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E137_ARATH2.608e-2242.42Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-B09-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744754 ID=EY744754; Name=EY744754; organism=Citrus sinensis; type=EST; length=936bp
TCCCACATTTCTCTTGGCTTGCACACAAAACCAGAACTCCCAAACCCTCT
CTCTCTCTTTCCCTCTCTCTCTTTCCCTCTCTCTCTTTCATGCTCTGCTT
CACCAAGAACCAGAGCATGGATCGTCTATTTGCTTTCTACTTTTTCTTAC
TTCTCTCCAGTTTCATTATTGCAGACGCGGGATCAATAGGAGTGAACTAC
GGCCGCATAGCCAACAACTTACCATCAGCATCCAAAGTCGTGCAGCTCCT
CAAATCTCAAGGCATTGAACGCGTCAAAGTATTCGACACCGACGCGGCAG
TCCTTAAAGCCCTATCCGGATCCGGAATCAAAGTCACCGTCGACTTACCC
AACGAGCTTCTATTCTCCGCAGCCAAACGCCCCTCCTTTGCCTTCTCATG
GGTCCAAAAAAACGTCGCCGCTTACCACCCAGATACCCAAATCGAAGCCA
TTGGCGTCGGCAATGAAGTGTTCGTCGACCCGCATAACACCACCAAGTTT
CTCCTACCCGCCATGAAAAACGTCCACGAAGCTCTTGTCAAGTACAATCT
CCACTCTTCCATTAAAGTCTCGTCACCCATTGCCCTTGAGCGCTTTGCAA
AATTCTTAACCGTCATCAGCCGGATCTTTCCGAACCCGAATTGGATCGAA
CCCCTTTTCCAGCCCATTGTTGAGTTTCCTCCCGCCCAACCGGGGCCTTT
CCTAATGGGTCAATGGCTAACCCATTTTTCCCCCTACGAAATCAAAACCC
TGGAACCTCTCCCCTTTTAAAATAACCCTTTTTTGTTTAGGGAAAAACCC
CCCCGCGGGTTTTGGGAAAGCGGGGTAAACGCGGGGTTTAACTTTATTTT
TCCCCCCCTTTTTCCAAAACGCCCACAATTACAACCCCCGCTTTTTTCCC
CCGCCCCTTTTTGTTCCCCCTCTTTGAAAAAAAAAA
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