EY744747

Overview
NameEY744747
Unique NameEY744747
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length550
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12886 contig Csv1_Contig12886:1..549. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY744747 vs. ExPASy Swiss-Prot
Match: FBK30_ARATH (F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana GN=At1g80440 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.198e-13
Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = -3 
Query:  213 ETATCPRSCAGVDSNDLYMCREGEVMALRCNTWQAVARLPADVCSVAFVTTWQGKLMVTGS----ARFGEPHMSYLLDLKSCKWTRTVTPDEFSGHVQSGCYLEI 515
            +T + P   AG    DLY C  G+VM    + WQ V ++PADV +V +V    G L+V G+    A +GE  + Y+ DL S +W +  T     GHVQ+GC+LE+
Sbjct:  256 DTVSPPTCVAG---GDLYACWGGDVMMFLNDKWQKVGQIPADVYNVTYVAVRPGMLIVIGNGKALAGYGEATVGYICDLSSSRWVKLET---HGGHVQAGCFLEV 354
The following BLAST results are available for this feature:
BLAST of EY744747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FBK30_ARATH4.198e-1339.05F-box/kelch-repeat protein At1g80440 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-B02-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744747 ID=EY744747; Name=EY744747; organism=Citrus sinensis; type=EST; length=550bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGCCCTTTTTTTTTT
TTTTTGATCATGAAAATTTCTCATTAACTATTTTATAAAAAAAAACAACA
ATACAAATTCTATTTTAATTTTAAAAAGGAAAAAAAAAAACTATTTTTCC
TTTTTTATTTTATTTTTATGTTCATGTATTTGTACGTAAAAAAACGAGCA
ATCGTCTCTTCAGATCTCCAAGTAACAACCAGATTGAACATGTCCTGAAA
ATTCATCAGGAGTCACCGTTCGTGTCCACTTGCAGCTCTTCAAATCCAAC
AAGTAACTCATGTGGGGCTCACCGAATCTAGCCGAACCGGTCACCATCAA
CTTCCCCTGCCACGTCGTCACGAATGCCACGCTGCACACATCAGCAGGTA
GCCTCGCCACAGCTTGCCACGTGTTACATCTCAGTGCCATCACCTCGCCT
TCCCGACACATGTACAAATCATTGCTGTCGACACCCGCGCATGACCTGGG
ACACGTGGCCGTTTCCATGTATTCCTCTTCAACCCTAGTTCTAAATCGCG
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