EY679688

Overview
NameEY679688
Unique NameEY679688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8621 contig Csv1_Contig8621:1..679. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY679688 vs. ExPASy Swiss-Prot
Match: CHL1_ARATH (Nitrate/chlorate transporter OS=Arabidopsis thaliana GN=CHL1 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.858e-31
Identity = 64/128 (50.00%), Postives = 81/128 (63.28%), Query Frame = 2
Query:   17 ARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMXXXXXXXXXXXXXXXXXXXXXXXHKVTGVKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYVYKDKR 400
            A +HG T      +PL  + L+PQ+ +VG GEA  Y GQLDFFLRECPKGMK M                        K TG   PW+AD+LN+GRLY+FYWL+A+L ALNF+I+L F++WYVYK+KR
Sbjct:  448 AHAHGPT---VKTLPLGFYLLIPQYLIVGIGEALIYTGQLDFFLRECPKGMKGMSTGLLLSTLALGFFFSSVLVTIVEKFTGKAHPWIADDLNKGRLYNFYWLVAVLVALNFLIFLVFSKWYVYKEKR 572          
BLAST of EY679688 vs. ExPASy Swiss-Prot
Match: PTR5_ARATH (Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.412e-22
Identity = 54/126 (42.86%), Postives = 73/126 (57.94%), Query Frame = 2
Query:   20 RSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMXXXXXXXXXXXXXXXXXXXXXXXHKVT--GVKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYVYK 391
            ++H L N+ T  IP+++FW VPQ+FLVG  E FT+IGQL+FF  + P  M+++                        KVT  G +  W+A NLN G L  F+WLLA LS LNF++YL  A+WY YK
Sbjct:  440 QTHNLYNEET--IPMTIFWQVPQYFLVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTAIAFGNYLSTFLVTLVTKVTRSGGRPGWIAKNLNNGHLDYFFWLLAGLSFLNFLVYLWIAKWYTYK 563          
BLAST of EY679688 vs. ExPASy Swiss-Prot
Match: PTR1_ARATH (Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.640e-16
Identity = 43/115 (37.39%), Postives = 64/115 (55.65%), Query Frame = 2
Query:   53 EIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMXXXXXXXXXXXXXXXXXXXXXXXHKVT--GVKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYVYK 391
            +I +S+FW +PQ+ L+G  E FT+IGQL+FF  + P  M+++                        K+T    K  W+ DNLN+G L  F++LLA LS LNF++YL  ++ Y YK
Sbjct:  449 QIHMSIFWQIPQYLLIGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVALGNYLSTVLVTVVMKITKKNGKPGWIPDNLNRGHLDYFFYLLATLSFLNFLVYLWISKRYKYK 563          
BLAST of EY679688 vs. ExPASy Swiss-Prot
Match: PTR3B_ARATH (Peptide transporter PTR3-B OS=Arabidopsis thaliana GN=PTR3-B PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.139e-16
Identity = 41/126 (32.54%), Postives = 69/126 (54.76%), Query Frame = 2
Query:   17 ARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMXXXXXXXXXXXXXXXXXXXXXXXHKVTGVK-KPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYVYK 391
            A  HGLT+     IPLS+F L+PQ+ L+G  +AF  I +L+FF  + P+ MK++                        ++T  + + W+ +NLN+ RL ++Y   A+L+ LNF+++L   R+Y Y+
Sbjct:  439 AAEHGLTHQTAVPIPLSIFTLLPQYVLMGLADAFIEIAKLEFFYDQAPESMKSLGTSYTSTSMAVGYFMSSILLSSVSQITKKQGRGWIQNNLNESRLDNYYMFFAVLNLLNFILFLVVIRFYEYR 564          
BLAST of EY679688 vs. ExPASy Swiss-Prot
Match: PTR3A_ARATH (Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.466e-14
Identity = 37/126 (29.37%), Postives = 69/126 (54.76%), Query Frame = 2
Query:   17 ARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMXXXXXXXXXXXXXXXXXXXXXXXHKVTGVK-KPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYVYK 391
            A  HGL +    ++PL++F L+PQF L+G  ++F  + +L+FF  + P+ MK++                        ++T  + + W+ +NLN+ RL  +Y   A+L+ +NFV++L   ++YVY+
Sbjct:  439 AADHGLIHQTGVKLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFMSSFLLSTVSEITKKRGRGWILNNLNESRLDYYYLFFAVLNLVNFVLFLVVVKFYVYR 564          
BLAST of EY679688 vs. ExPASy Swiss-Prot
Match: PTR2X_ARATH (Probable peptide transporter At1g52190 OS=Arabidopsis thaliana GN=At1g52190 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.466e-14
Identity = 43/123 (34.96%), Postives = 62/123 (50.41%), Query Frame = 2
Query:   17 ARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMXXXXXXXXXXXXXXXXXXXXXXXHKVT--GVKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARW 379
            A S G  N+  A + +S  WLVPQ+ L G  EA T IGQ +FF  E PK M ++                       +++T    K+ W++DN+N+G    +YW+LAI+S +N VIY     W
Sbjct:  443 AISQGYANNSNAVVDISAMWLVPQYVLHGLAEALTAIGQTEFFYTEFPKSMSSIAASLFGLGMAVASLLASVVLNAVNELTSRNGKESWVSDNINKGHYNYYYWVLAIMSFIN-VIYYVICSW 564          
BLAST of EY679688 vs. ExPASy Swiss-Prot
Match: PTR2_ARATH (Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.697e-13
Identity = 40/116 (34.48%), Postives = 59/116 (50.86%), Query Frame = 2
Query:   50 AEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMXXXXXXXXXXXXXXXXXXXXXXXHKVT--GVKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYVYK 391
            A +P+SV W +PQ+F++GA E F +IGQL+FF  + P  M+++                          T    ++ W++DNLN G L  F+WLLA LS +N  +Y   A  Y  K
Sbjct:  466 APVPISVLWQIPQYFILGAAEVFYFIGQLEFFYDQSPDAMRSLCSALALLTNALGNYLSSLILTLVTYFTTRNGQEGWISDNLNSGHLDYFFWLLAGLSLVNMAVYFFSAARYKQK 581          
The following BLAST results are available for this feature:
BLAST of EY679688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
CHL1_ARATH6.858e-3150.00Nitrate/chlorate transporter OS=Arabidopsis thalia... [more]
PTR5_ARATH3.412e-2242.86Peptide transporter PTR5 OS=Arabidopsis thaliana G... [more]
PTR1_ARATH1.640e-1637.39Peptide transporter PTR1 OS=Arabidopsis thaliana G... [more]
PTR3B_ARATH8.139e-1632.54Peptide transporter PTR3-B OS=Arabidopsis thaliana... [more]
PTR3A_ARATH4.466e-1429.37Peptide transporter PTR3-A OS=Arabidopsis thaliana... [more]
PTR2X_ARATH4.466e-1434.96Probable peptide transporter At1g52190 OS=Arabidop... [more]
PTR2_ARATH1.697e-1334.48Peptide transporter PTR2 OS=Arabidopsis thaliana G... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-H09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679688 ID=EY679688; Name=EY679688; organism=Citrus sinensis; type=EST; length=678bp
CCACGCGTCCGGAGCCGCAAGATCACACGGTTTGACAAATGATCCAACGG
CCGAGATCCCGTTAAGCGTGTTCTGGCTAGTGCCTCAATTTTTCTTGGTG
GGTGCAGGAGAGGCCTTCACTTACATAGGGCAGCTTGATTTTTTCCTAAG
GGAGTGTCCAAAAGGGATGAAGACCATGAGTACAGGATTGTTTTTGAGTA
CACTGTCACTAGGATTTTTCGTTAGCTCTTTATTGGTCTCTCTGGTGCAC
AAAGTGACAGGGGTTAAGAAGCCATGGCTAGCAGACAATTTAAACCAAGG
GAGGCTATATGATTTCTACTGGCTGTTGGCAATTTTGAGCGCTTTGAACT
TTGTTATATACTTGGCCTTTGCTAGATGGTATGTGTACAAGGATAAGAGG
CTTGCAGAGGAGGGAATTGAATTGGAGGAACCAGAGCCCGCCTGCCATTA
ACAAGGGTTGGTCTCTTTCTGAATTTTGAAATATGTATCGGTACAAAGTC
TTTTTGGGTTTTAATAAGTTTGTAACCTTTACATGTATAAAAAAAAAAGG
AAAGGAGCAACTACTATTAAAAGGAACAAAATGTTCTTTTGGTTACCTAT
ACACACCAAGTGTCTGTACTTCAGTTTAATTTTAAAAGTACAGCCATTTA
CAGTTTTCAATAAAAAAAAAAAAAAAAA
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