EY679673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679673 vs. ExPASy Swiss-Prot
Match: RH50_ARATH (DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis thaliana GN=RH50 PE=2 SV=2) HSP 1 Score: 387.111 bits (993), Expect = 8.563e-107 Identity = 189/258 (73.26%), Postives = 221/258 (85.66%), Query Frame = 3 Query: 12 GILQLINLRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNKIETCRKVENILKRFDRKETRVRVLPFHAALDQETRLANMKEFTTSRSKEARLFLVCTDRASRGIDFAGVDHVVLFDFPRDPSEYXXXXXXXXXXXXXXXKAFIFVVGKQVSLAQRIMKKNRKAHPLHNVPSAF 785 GIL L NLRCAILDEVDILF D++FE ALQ+LI+SSPVTAQYLFVTATLP+EIYNKLVEVFPDC+VVMGP +HR+S LEEFLVDCSGD ++KTPETAF NKK+ALLQ++E++PVSKTI+FCNKIETCRKVENI KR DRKE ++ VLPFHAAL QE+RL NM+EFT+S+ +E LFLVCTDRASRGIDF+GVDHVVLFDFPRDPSEY KAFIFVVGKQV LA+RI+++N K HP+H+VP+A+ Sbjct: 520 GILGLSNLRCAILDEVDILFGDDEFEAALQNLINSSPVTAQYLFVTATLPLEIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLVDCSGDDNAEKTPETAFQNKKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHVLPFHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYVRRVGRTARGARGKGKAFIFVVGKQVGLARRIIERNEKGHPVHDVPNAY 777
BLAST of EY679673 vs. ExPASy Swiss-Prot
Match: RH50_ORYSJ (DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica GN=Os03g0108600 PE=2 SV=2) HSP 1 Score: 345.51 bits (885), Expect = 2.857e-94 Identity = 164/255 (64.31%), Postives = 205/255 (80.39%), Query Frame = 3 Query: 12 GILQLINLRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNKIETCRKVENILKRFDRKETRVRVLPFHAALDQETRLANMKEFTTSRSKEARLFLVCTDRASRGIDFAGVDHVVLFDFPRDPSEYXXXXXXXXXXXXXXXKAFIFVVGKQVSLAQRIMKKNRKAHPLHNVP 776 G +QL NLRC +LDEVDIL+ +E FE L LI+ +P+T QYLFVTATLP++IYNK+VE FPDC+++MGPG+HR S LEE LVDCSGD +K PETAF NKKSAL+++IE+SPV KTI+FCNKIETCRKVEN L+R DRK ++++VLPFHAALDQ+ R+AN+KEF ++ ++ +FLVCTDRASRGIDFA V+HVVLFD+PRDPSEY KAF+F VGKQVSLA+R+M++N K HPLH+VP Sbjct: 386 GFVQLNNLRCVVLDEVDILYGEESFEQVLHQLITVAPLTTQYLFVTATLPLDIYNKVVETFPDCELIMGPGVHRTSSRLEEILVDCSGDDNEEKNPETAFSNKKSALVKIIEESPVRKTIIFCNKIETCRKVENALRRVDRKASQIKVLPFHAALDQQQRIANIKEFLNKQTADS-MFLVCTDRASRGIDFANVNHVVLFDYPRDPSEYVRRVGRTARGASGNGKAFVFAVGKQVSLARRVMERNIKGHPLHDVP 639
BLAST of EY679673 vs. ExPASy Swiss-Prot
Match: RH39_ARATH (DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana GN=RH39 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 4.988e-14 Identity = 60/208 (28.85%), Postives = 99/208 (47.60%), Query Frame = 3 Query: 45 ILDEVDILFNDEDFEVALQSLISSSPVTA--------QYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPV--SKTIVFCNKIETCRKVENILKRFDRKETRVRVLPFHAALDQETRLANMKEFTTSRSKEARLFLVCTDRASRGIDFAGVDHVVLFDFPRDPSEY 638 +LDE D +F D F ++ ++ A Q + VTAT+ + + + E F + + +H+ + SG ++ K ALLQ++E S SK +VFCN + + R V++ L E ++ + +H + E R+ N+K+F L VCTD A+RG+D VDHVV+FDFP++ +Y Sbjct: 268 VLDEADTMF-DRGFGPEIRKFLAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIANARHDFIKLSGGED-----------KLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLS-----ENQISTVNYHGEVPAEQRVENLKKFKDEEGDCPTL--VCTDLAARGLDL-DVDHVVMFDFPKNSIDY 455
BLAST of EY679673 vs. ExPASy Swiss-Prot
Match: RH39_ORYSJ (DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica GN=Os01g0184500 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.475e-13 Identity = 72/259 (27.80%), Postives = 115/259 (44.40%), Query Frame = 3 Query: 30 NLRCAILDEVDILFNDEDFEVALQSLISSSPVTA--------QYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPV--SKTIVFCNKIETCRKVENILKRFDRKETRVRVLPFHAALDQETRLANMKEFTTSRSKEARL-FLVCTDRASRGIDFAGVDHVVLFDFPRDPSEYXXXXXXXXXXXXXXXKAFIFVVGKQVSLAQRI---MKKNRKAHPL 764 +++ +LDE D +F D+ F ++ ++ A Q + VTAT+ + + E F + + + SG + NK ALLQ++E S +K +VFCN + + R V++ L E ++ + +H + E R+ N+ +F R++E LVCTD A+RG+D VDHV++FDFP + +Y K V K V+LA RI MKKN L Sbjct: 261 DIKYLVLDEADTMF-DQGFGPDIRKFLAPLKNRAAKPGDQGFQTVLVTATMTKAVQKLIDEEFEGIVHLRTTTFQKRVATARHDFIKLSGSE-----------NKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLT-----ENQISTVNYHGEVPAEERVENLNKF---RNEEGDCPTLVCTDLAARGLDL-DVDHVIMFDFPSNSIDY-LHRTGRTARMGAKGKVTSLVAKKDVTLATRIEEAMKKNESLEAL 497
BLAST of EY679673 vs. ExPASy Swiss-Prot
Match: IF4A_CRYPV (Eukaryotic initiation factor 4A OS=Cryptosporidium parvum GN=EIF4-A PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.229e-12 Identity = 56/209 (26.79%), Postives = 93/209 (44.50%), Query Frame = 3 Query: 12 GILQLINLRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNKIETCRKVENILKRFDRKETRVRVLPFHAALDQETRLANMKEFTTSRSKEARLFLVCTDRASRGIDFAGVDHVVLFDFPRDPSEY 638 G L++ NL+ ILDE D + + F+V + + P Q +AT+P EI + + D K ++ G+ +F V D+ K L+ L E + + I++CN T R+V+ + K+ +E H +DQ+ R M++F + S+ L+ TD +RGID V V+ +D P P Y Sbjct: 167 GYLRVDNLKLFILDEADEMLS-RGFKVQIHDIFKKLPQDVQVALFSATMPNEILHLTTQFMRDPKRILVKQEELTLEGIRQFYVGVEKDEW-----------KMDTLIDLYETLTIVQAIIYCN---TRRRVDQLTKQM--RERDFTCSSMHGDMDQKDREVIMRQFRSGSSR----VLITTDLLARGIDVQQVSLVINYDLPVSPETY 354
BLAST of EY679673 vs. ExPASy Swiss-Prot
Match: RRP3_ENCCU (ATP-dependent rRNA helicase RRP3 OS=Encephalitozoon cuniculi GN=RRP3 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.575e-12 Identity = 62/202 (30.69%), Postives = 88/202 (43.56%), Query Frame = 3 Query: 33 LRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNKIETCRKVENILKRFDRKETRVRVLPFHAALDQETRLANMKEFTTSRSKEARLFLVCTDRASRGIDFAGVDHVVLFDFPRDPSEY 638 +R +LDE D F ++DF L+++I S Q L TAT+ EI + K + + P L+E+ + A K SAL++L+E S IVF + T R + L R + H L QE R M+ F SR LVCTD SRG+D + VD V+ FD P+ +Y Sbjct: 144 VRKFVLDEADRFF-EQDFVEDLETIIPSLREKRQTLLFTATMSDEISKLSSSILKRPKTIRTAEKYETVPALKEYYLF------------VAMKWKNSALVELLEMSQGMSVIVFVSMCVTARVMSLALARLGFCSEAL-----HGELSQEKREEAMRSFKESRFN----VLVCTDLGSRGLDISHVDLVINFDVPKSGKDY 323
BLAST of EY679673 vs. ExPASy Swiss-Prot
Match: DDX18_DICDI (Probable ATP-dependent RNA helicase ddx18 OS=Dictyostelium discoideum GN=ddx18 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.026e-11 Identity = 59/232 (25.43%), Postives = 96/232 (41.38%), Query Frame = 3 Query: 30 NLRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHR---ISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNKIETCRKVENILKRFDRKETRVRVLPFHAALDQETRLANMKEFTTSRSKEARLFLVCTDRASRGIDFAGVDHVVLFDFPRDPSEYXXXXXXXXXXXXXXXKAFIFVVGKQV 716 NL+C I+DE D + + FE + +I P T Q + +AT ++ + + V +G R GLE+ V C ++ FL L ++K+ K IVF + + +L D + VL H Q+ R EF + L+CTD A+RG+D VD ++ +D P DP EY +A +F++ K++ Sbjct: 266 NLKCLIIDEADRIL-EVGFEEEMHQIIKKVPKTRQTMLFSATQTRKVDDIAKVSLNNSPVYVGVDDEREISTVEGLEQGYVVCPSERR--------FL----LLYTFLKKNLSKKIIVFLSSCNAVKYTAELLNYID-----IPVLELHGRQKQQKRTNTFYEFVNAEKG----ILICTDVAARGLDIPSVDWIIQYDPPDDPKEYIHRVGRTARGVGKKGRALLFLLPKEL 475
BLAST of EY679673 vs. ExPASy Swiss-Prot
Match: IF4A_YARLI (ATP-dependent RNA helicase eIF4A OS=Yarrowia lipolytica GN=TIF1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.741e-11 Identity = 59/208 (28.37%), Postives = 95/208 (45.67%), Query Frame = 3 Query: 15 ILQLINLRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNKIETCRKVENILKRFDRKETRVRVLPFHAALDQETRLANMKEFTTSRSKEARLFLVCTDRASRGIDFAGVDHVVLFDFPRDPSEY 638 IL+ ++ ILDE D + + E F+ + + ++ P T Q + ++AT+P E+ + + D ++ G+++F +D +QES K L L E VS+ ++FCN T RKV+ + + E V H +Q R MK F T S+ L+ TD +RGID V V+ FD P + Y Sbjct: 159 ILKTDLIKMFILDEADEMLSRE-FKDPIYDIFTTLPETTQTVLLSATMPAEVLDITGKFMRDPVRILVKKDELTLEGIKQFYIDV--EQESYKF---------EVLCDLYETINVSQAVIFCN---TRRKVDYLTQALT--EADFTVSSMHGETEQSQRDVIMKAFRTGSSR----ILITTDLLARGIDVQQVSLVINFDLPSNRENY 345
BLAST of EY679673 vs. ExPASy Swiss-Prot
Match: IF4A_KLULA (ATP-dependent RNA helicase eIF4A OS=Kluyveromyces lactis GN=TIF1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.741e-11 Identity = 53/208 (25.48%), Postives = 96/208 (46.15%), Query Frame = 3 Query: 15 ILQLINLRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNKIETCRKVENILKRFDRKETRVRVLPFHAALDQETRLANMKEFTTSRSKEARLFLVCTDRASRGIDFAGVDHVVLFDFPRDPSEY 638 I + N++ ILDE D + + F+ + ++ + P T+Q + ++AT+P ++ + D ++ G+ ++ V+ +Q K L L + V++ ++FCN T RKVE + +R +E V ++ L Q+ R MKEF + S+ L+ TD +RGID V V+ +D P + Y Sbjct: 159 IFKTDNIKMFILDEADEMLST-GFKEQIYNIFTMLPPTSQVVLLSATMPGDVLEVTSKFMKDPVRILVKKDELTLEGIGQYYVNVEEEQY-----------KYDCLTDLYDSISVTQAVIFCN---TRRKVEELTERL--RENNFTVSAIYSDLQQQERDTIMKEFRSGSSR----ILISTDLLARGIDVQQVSLVINYDLPSNKENY 345
BLAST of EY679673 vs. ExPASy Swiss-Prot
Match: DBP8_ASPNC (ATP-dependent RNA helicase dbp8 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dbp8 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 8.804e-11 Identity = 70/217 (32.26%), Postives = 94/217 (43.32%), Query Frame = 3 Query: 24 LINLRCAILDEVDILFND------EDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPDCKV------VMGPGMHRISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNKIETCRKVENILKRFDRKETRVRVLPFHAALDQETRLANMKEFTTSRSKEARLFLVCTDRASRGIDFAGVDHVVLFDFPRDPSEY 638 L +R +LDE D L D E L +L SS Q L TATL E+ P K + I P L++ + + T AFL+ +L E + I+FCN +T +E +L+R RV H+ L Q R AN+ F R+ ARL LV TD ASRG+D V+ VV FD PR+P +Y Sbjct: 236 LKRVRMVVLDEADRLLAPGHGSMLPDVETCLSALPPSSE--RQTLLFTATLTPEVRALKSMPRPSTKPPIFVTEISTENNASIPPTLKQTYL------KVPMTHREAFLH----VLLSTEANASKPAIIFCNHTKTADLLERMLRRLSH-----RVTSLHSLLPQSERNANLARF---RASAARL-LVATDVASRGLDIPSVELVVNFDVPRNPDDY 431 The following BLAST results are available for this feature:
BLAST of EY679673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY679673 ID=EY679673; Name=EY679673; organism=Citrus sinensis; type=EST; length=1005bpback to top |