EY679665
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679665 vs. ExPASy Swiss-Prot
Match: ROA2_MOUSE (Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus GN=Hnrnpa2b1 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 4.690e-12 Identity = 60/193 (31.09%), Postives = 84/193 (43.52%), Query Frame = 2 Query: 14 GFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPKEFSPGPSRSSMIGYNNFGFNRPTNLLNSFAQRYNLSPAGGFGVRMDSRFSPLATGRGGISPFG-GAGYGVGMNLDGGLSPSYGGSSNFSNSLGYGRMLGPFPGGNSNRFSTPVGFSGG-NGRGDSVLSSTTWNVWGN-GSLNSATNPASPGAFLGS 583 GFGF+T+D + VD+++ + +H +NG EV++A+ ++ S NFGF + G FG S F RGG +G G G+G G N GG P G NF S GYG G + GG + G+ GG + G S ++N +GN S P G F GS Sbjct: 154 GFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQSSRSGRGGNFGFGD------------SRGGGGNFGPGPGSNF------RGGSDGYGSGRGFGDGYNGYGG-GP---GGGNFGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGSYNDFGNYNQQPSNYGPMKSGNFGGS 324
BLAST of EY679665 vs. ExPASy Swiss-Prot
Match: ROA2_SAGOE (Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Saguinus oedipus GN=HNRNPA2B1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 6.125e-12 Identity = 60/193 (31.09%), Postives = 83/193 (43.01%), Query Frame = 2 Query: 14 GFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPKEFSPGPSRSSMIGYNNFGFNRPTNLLNSFAQRYNLSPAGGFGVRMDSRFSPLATGRGGISPFG-GAGYGVGMNLDGGLSPSYGGSSNFSNSLGYGRMLGPFPGGNSNRFSTPVGFSGG-NGRGDSVLSSTTWNVWGN-GSLNSATNPASPGAFLGS 583 GFGF+T+D + VD+++ + +H +NG EV++A+ ++ S NFGF + G FG S F RGG +G G G+G G N GG P G NF S GYG G + GG + G+ GG + G S +N +GN S P G F GS Sbjct: 142 GFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQSSRSGRGGNFGFGD------------SRGGGGNFGPGPGSNF------RGGSDGYGSGRGFGDGYNGYGG-GP---GGGNFGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYNDFGNYNQQPSNYGPMKSGNFGGS 312
BLAST of EY679665 vs. ExPASy Swiss-Prot
Match: ROA2_HUMAN (Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Homo sapiens GN=HNRNPA2B1 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 6.125e-12 Identity = 60/193 (31.09%), Postives = 83/193 (43.01%), Query Frame = 2 Query: 14 GFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPKEFSPGPSRSSMIGYNNFGFNRPTNLLNSFAQRYNLSPAGGFGVRMDSRFSPLATGRGGISPFG-GAGYGVGMNLDGGLSPSYGGSSNFSNSLGYGRMLGPFPGGNSNRFSTPVGFSGG-NGRGDSVLSSTTWNVWGN-GSLNSATNPASPGAFLGS 583 GFGF+T+D + VD+++ + +H +NG EV++A+ ++ S NFGF + G FG S F RGG +G G G+G G N GG P G NF S GYG G + GG + G+ GG + G S +N +GN S P G F GS Sbjct: 154 GFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQSSRSGRGGNFGFGD------------SRGGGGNFGPGPGSNF------RGGSDGYGSGRGFGDGYNGYGG-GP---GGGNFGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYNDFGNYNQQPSNYGPMKSGNFGGS 324
BLAST of EY679665 vs. ExPASy Swiss-Prot
Match: ROA2_BOVIN (Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Bos taurus GN=HNRNPA2B1 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 6.125e-12 Identity = 60/193 (31.09%), Postives = 83/193 (43.01%), Query Frame = 2 Query: 14 GFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPKEFSPGPSRSSMIGYNNFGFNRPTNLLNSFAQRYNLSPAGGFGVRMDSRFSPLATGRGGISPFG-GAGYGVGMNLDGGLSPSYGGSSNFSNSLGYGRMLGPFPGGNSNRFSTPVGFSGG-NGRGDSVLSSTTWNVWGN-GSLNSATNPASPGAFLGS 583 GFGF+T+D + VD+++ + +H +NG EV++A+ ++ S NFGF + G FG S F RGG +G G G+G G N GG P G NF S GYG G + GG + G+ GG + G S +N +GN S P G F GS Sbjct: 142 GFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQSSRSGRGGNFGFGD------------SRGGGGNFGPGPGSNF------RGGSDGYGSGRGFGDGYNGYGG-GP---GGGNFGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYNDFGNYNQQPSNYGPMKSGNFGGS 312
BLAST of EY679665 vs. ExPASy Swiss-Prot
Match: ROA1_HUMAN (Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens GN=HNRNPA1 PE=1 SV=5) HSP 1 Score: 72.0182 bits (175), Expect = 6.125e-12 Identity = 60/201 (29.85%), Postives = 91/201 (45.27%), Query Frame = 2 Query: 14 GFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPKE--FSPGPSRSSMIGYNNFGFNRPTNL--LNSFAQRYNLSPAGGFGVRMDSRFSPLATGRGGISPFGGAGYGV-GMNLDGGL---SPSYGGSSN--FSNSLGYGRMLGPFPG-GNSNRFSTPVGFSGGNGRGDSVLSSTTWNVWGN-GSLNSATNPASPGAFLG 580 GF F+T+D ++VD+++ + +H +NG EV++A+ K+ S S+ G NFG R ++F + N S GGFG G G +GG+G G G DGG P Y G S S GYG + G G+ + ++ G G G G + ++N +GN + +S P G F G Sbjct: 147 GFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFG------------GSRGGGGYGGSGDGYNGFGNDGGYGGGGPGYSGGSRGYGSGGQGYGNQGSGYGGSGSYDSYNNGGGGGFGGGSGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGG 335
BLAST of EY679665 vs. ExPASy Swiss-Prot
Match: ROA2_RAT (Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus GN=Hnrnpa2b1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 8.000e-12 Identity = 60/193 (31.09%), Postives = 82/193 (42.49%), Query Frame = 2 Query: 14 GFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPKEFSPGPSRSSMIGYNNFGFNRPTNLLNSFAQRYNLSPAGGFGVRMDSRFSPLATGRGGISPFG-GAGYGVGMNLDGGLSPSYGGSSNFSNSLGYGRMLGPFPGGNSNRFSTPVGFSGG-NGRGDSVLSSTTWNVWGN-GSLNSATNPASPGAFLGS 583 GFGF+T+D + VD++ + +H +NG EV++A+ ++ S NFGF + G FG S F RGG +G G G+G G N GG P G NF S GYG G + GG + G+ GG + G S +N +GN S P G F GS Sbjct: 154 GFGFVTFDDHDPVDKIFLQKYHTINGHNAEVRKALSRQEMQEVQSSRSGRGGNFGFGD------------SRGGGGNFGPGPGSNF------RGGSDGYGSGRGFGDGYNGYGG-GP---GGGNFGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYNDFGNYNQQPSNYGPMKSGNFGGS 324
BLAST of EY679665 vs. ExPASy Swiss-Prot
Match: ROA2_PONAB (Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Pongo abelii GN=HNRNPA2B1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.782e-11 Identity = 60/193 (31.09%), Postives = 82/193 (42.49%), Query Frame = 2 Query: 14 GFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPKEFSPGPSRSSMIGYNNFGFNRPTNLLNSFAQRYNLSPAGGFGVRMDSRFSPLATGRGGISPFG-GAGYGVGMNLDGGLSPSYGGSSNFSNSLGYGRMLGPFPGGNSNRFSTPVGFSGG-NGRGDSVLSSTTWNVWGN-GSLNSATNPASPGAFLGS 583 GFGF+T+D + VD+++ + H +NG EV++A+ ++ S NFGF + G FG S F RGG +G G G+G G N GG P G NF S GYG G + GG + G+ GG + G S +N +GN S P G F GS Sbjct: 154 GFGFVTFDDHDPVDKIVLQKHHTINGHNAEVRKALSRQEMQEVQSSRSGRGGNFGFGD------------SRGGGGNFGPGPGSNF------RGGSDGYGSGRGFGDGYNGYGG-GP---GGGNFGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYNDFGNYNQQPSNYGPMKSGNFGGS 324
BLAST of EY679665 vs. ExPASy Swiss-Prot
Match: ROA3_HUMAN (Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens GN=HNRNPA3 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 2.328e-11 Identity = 61/200 (30.50%), Postives = 86/200 (43.00%), Query Frame = 2 Query: 14 GFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPKE--FSPGPSRSSMIGYNNFGFNRPTNL---LNSFAQRYNLSPAGGFGVRMDSRFSPLATGRGGISPFGGAGYGVGMNLDGGLSPSYGGSSNFSNSLGYGRMLGPFPGGNSNRFSTPVGF----SGGNGRGDSVLSSTTWNVWGN--GSLNSATNPASPGAFLG 580 GF F+T+D + VD+++ + +H +NG EVK+A+ K+ S G R G NF R N +F + N GG+G G GG + FGG DGG +YGG +S+ GYG GP G + G+ GGN G + +N +GN G S P G+F G Sbjct: 168 GFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSGNF-MGRGGNFGGGGGNFGRGGNFGGRGGYGGGGGGSRGSYGGGDGGYNGFGG---------DGG---NYGGGPGYSSRGGYGGG-GPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKGGSFGG 353
BLAST of EY679665 vs. ExPASy Swiss-Prot
Match: RO31_XENLA (Heterogeneous nuclear ribonucleoprotein A3 homolog 1 OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.328e-11 Identity = 61/201 (30.35%), Postives = 84/201 (41.79%), Query Frame = 2 Query: 14 GFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPKE--FSPGPSRSSMIGYNNFGFNRPTNLLNSFAQRYNLSPAGGFGVRMDSRFSPLATGRGGISPFGGAGY---GVGMNLDGGLSPSYG-----GSSNFSNSLGYGRMLGPFPGGNSNRFSTPVGFSGGNGRGDSVLSSTTWNVWGN--GSLNSATNPASPGAFLG 580 GF F+T+D + VD+++ + +H +NG EVK+A+ K+ + R G +NF R N + GGFG R G GG GG GY G G N GG +YG G + S GYG G + GG G+ G N G+ +N +GN G S P G+F G Sbjct: 160 GFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMQTASAQRGRGGGGSNF-MGRGGNYGGGDGGNFGRGGGGGFGNR---------GGYGGGGGRGGGGYGGGGDGYNGFGGDGGNYGGGPGYGGRGYGGSPGYGNQGGGYGGGGG-------GYDGYNESGN--FGGGNYNDFGNYGGQQQSNYGPMKGGSFSG 341
BLAST of EY679665 vs. ExPASy Swiss-Prot
Match: RO21_XENLA (Heterogeneous nuclear ribonucleoprotein A2 homolog 1 OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.772e-11 Identity = 55/195 (28.21%), Postives = 80/195 (41.03%), Query Frame = 2 Query: 14 GFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPKEFSPGPSRSSMIGYNNFGFNRPTNLLNSFAQRYNLSPAGGFGVRMDSRFSPLATGRGGISPFGGAGYGVGMNLDGGLSPSYGG--SSNFSNSLGYGRMLGPFPGGNSNRFSTPVGFSGGNGRGDSVLSSTTWNVWGNGSLNSAT-NPASPGAFLGSGK 589 GF F+T+D + VD+++ + +H +NG EV++A+ K+ + NFGF + P G F D G G + +GG G G G N GG PSYGG + GYG G + GG N + GGN G +N +GN + S+ P G G + Sbjct: 142 GFAFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQEMQDVQNTRNNRGGNFGFGDSRG-----GGNFGSGPGGNFRGGSDGYGGGRGYGDNGYNGYGG-GQG-GGNYGGG--PSYGGGRGGGYGGGAGYGNQGGGYGGGYDN-------YGGGNYGGGG-----NYNDFGNYNQQSSNYGPMKSGGNFGGNR 315 The following BLAST results are available for this feature:
BLAST of EY679665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679665 ID=EY679665; Name=EY679665; organism=Citrus sinensis; type=EST; length=1006bpback to top |