EY679662 | Citrus Genome Database

Overview


Name	EY679662
Unique Name	EY679662
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	1010

Libraries


Library Name	Type
Sweet orange leaf, young greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY679662 vs. ExPASy Swiss-Prot
Match: H2AZ_SCHPO (Histone H2A.Z OS=Schizosaccharomyces pombe GN=pht1 PE=2 SV=2)

HSP 1 Score: 62.7734 bits (151), Expect = 4.361e-17
Identity = 33/53 (62.26%), Postives = 36/53 (67.92%), Query Frame = 2

Query:  383 LQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLK 541
            LQFPVGRV R LK               Y+AA+LEYLTAEVLELAGNA+KDLK
Sbjct:   33 LQFPVGRVRRFLKAKTQNNMRVGAKSAVYSAAVLEYLTAEVLELAGNAAKDLK 85

HSP 2 Score: 33.8834 bits (76), Expect = 4.361e-17
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 3

Query:  519 GMLARI*KVKRITPRHLQLAIR 584
            G  A+  KVKRITPRHLQLAIR
Sbjct:   78 GNAAKDLKVKRITPRHLQLAIR 99

HSP 3 Score: 32.7278 bits (73), Expect = 4.361e-17
Identity = 15/24 (62.50%), Postives = 18/24 (75.00%), Query Frame = 1

Query:  574 LLSEGDEKLDTLI*GTIAGGRIIP 645
            L   GDE+LDTLI  TIAGG ++P
Sbjct:   96 LAIRGDEELDTLIRATIAGGGVLP 119

[Close]

BLAST of EY679662 vs. ExPASy Swiss-Prot
Match: H2AZ_USTMA (Histone H2A.Z OS=Ustilago maydis GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 5.818e-16
Identity = 33/53 (62.26%), Postives = 37/53 (69.81%), Query Frame = 2

Query:  383 LQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLK 541
            LQFPVGR+HR LK               YT+AILEYLTAEVLELAGNASKD++
Sbjct:   32 LQFPVGRIHRHLKSRTQNHVRIGAKAAVYTSAILEYLTAEVLELAGNASKDMR 84

HSP 2 Score: 30.8018 bits (68), Expect = 5.818e-16
Identity = 13/15 (86.67%), Postives = 15/15 (100.00%), Query Frame = 3

Query:  540 KVKRITPRHLQLAIR 584
            ++KRITPRHLQLAIR
Sbjct:   84 RLKRITPRHLQLAIR 98

HSP 3 Score: 30.0314 bits (66), Expect = 5.818e-16
Identity = 12/24 (50.00%), Postives = 18/24 (75.00%), Query Frame = 1

Query:  574 LLSEGDEKLDTLI*GTIAGGRIIP 645
            L   GDE+LD+++  TIAGG ++P
Sbjct:   95 LAIRGDEELDSMVRATIAGGGVLP 118

[Close]

BLAST of EY679662 vs. ExPASy Swiss-Prot
Match: H2AZ_YARLI (Histone H2A.Z OS=Yarrowia lipolytica GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 2.107e-15
Identity = 30/53 (56.60%), Postives = 36/53 (67.92%), Query Frame = 2

Query:  383 LQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLK 541
            LQFPVGR+ R +K+              Y AA+LEYLTAEVLELAGNA++DLK
Sbjct:   38 LQFPVGRIKRYMKKSVQNKVRVGAKAAIYIAAVLEYLTAEVLELAGNAARDLK 90

HSP 2 Score: 35.039 bits (79), Expect = 2.107e-15
Identity = 18/22 (81.82%), Postives = 18/22 (81.82%), Query Frame = 3

Query:  519 GMLARI*KVKRITPRHLQLAIR 584
            G  AR  KVKRITPRHLQLAIR
Sbjct:   83 GNAARDLKVKRITPRHLQLAIR 104

HSP 3 Score: 28.8758 bits (63), Expect = 2.107e-15
Identity = 14/24 (58.33%), Postives = 17/24 (70.83%), Query Frame = 1

Query:  574 LLSEGDEKLDTLI*GTIAGGRIIP 645
            L   GDE+LDTLI  TIA G ++P
Sbjct:  101 LAIRGDEELDTLIQATIAYGGVMP 124

[Close]

BLAST of EY679662 vs. ExPASy Swiss-Prot
Match: H2AZ_GIBZE (Histone H2A.Z OS=Gibberella zeae GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 3.501e-15
Identity = 31/53 (58.49%), Postives = 34/53 (64.15%), Query Frame = 2

Query:  383 LQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLK 541
            LQFP GRV R LK+              Y  A+LEYLTAEVLELAGNA+KDLK
Sbjct:   37 LQFPCGRVKRFLKQNTQQKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLK 89

HSP 2 Score: 33.8834 bits (76), Expect = 3.501e-15
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 3

Query:  519 GMLARI*KVKRITPRHLQLAIR 584
            G  A+  KVKRITPRHLQLAIR
Sbjct:   82 GNAAKDLKVKRITPRHLQLAIR 103

HSP 3 Score: 29.261 bits (64), Expect = 3.501e-15
Identity = 14/24 (58.33%), Postives = 17/24 (70.83%), Query Frame = 1

Query:  574 LLSEGDEKLDTLI*GTIAGGRIIP 645
            L   GDE+LDTLI  TIA G ++P
Sbjct:  100 LAIRGDEELDTLIRATIAYGGVLP 123

[Close]

BLAST of EY679662 vs. ExPASy Swiss-Prot
Match: H2AZ_NEUCR (Histone H2A.Z OS=Neurospora crassa GN=htz-1 PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 3.515e-15
Identity = 31/53 (58.49%), Postives = 34/53 (64.15%), Query Frame = 2

Query:  383 LQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLK 541
            LQFP GRV R LK+              Y  A+LEYLTAEVLELAGNA+KDLK
Sbjct:   36 LQFPCGRVKRFLKQNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLK 88

HSP 2 Score: 33.8834 bits (76), Expect = 3.515e-15
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 3

Query:  519 GMLARI*KVKRITPRHLQLAIR 584
            G  A+  KVKRITPRHLQLAIR
Sbjct:   81 GNAAKDLKVKRITPRHLQLAIR 102

HSP 3 Score: 29.261 bits (64), Expect = 3.515e-15
Identity = 14/24 (58.33%), Postives = 17/24 (70.83%), Query Frame = 1

Query:  574 LLSEGDEKLDTLI*GTIAGGRIIP 645
            L   GDE+LDTLI  TIA G ++P
Sbjct:   99 LAIRGDEELDTLIRATIAFGGVLP 122

[Close]

BLAST of EY679662 vs. ExPASy Swiss-Prot
Match: H2AZ_MAGGR (Histone H2A.Z OS=Magnaporthe grisea GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 3.515e-15
Identity = 31/53 (58.49%), Postives = 34/53 (64.15%), Query Frame = 2

Query:  383 LQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLK 541
            LQFP GRV R LK+              Y  A+LEYLTAEVLELAGNA+KDLK
Sbjct:   35 LQFPCGRVKRFLKQNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLK 87

HSP 2 Score: 33.8834 bits (76), Expect = 3.515e-15
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 3

Query:  519 GMLARI*KVKRITPRHLQLAIR 584
            G  A+  KVKRITPRHLQLAIR
Sbjct:   80 GNAAKDLKVKRITPRHLQLAIR 101

HSP 3 Score: 29.261 bits (64), Expect = 3.515e-15
Identity = 14/24 (58.33%), Postives = 17/24 (70.83%), Query Frame = 1

Query:  574 LLSEGDEKLDTLI*GTIAGGRIIP 645
            L   GDE+LDTLI  TIA G ++P
Sbjct:   98 LAIRGDEELDTLIRATIAFGGVLP 121

[Close]

BLAST of EY679662 vs. ExPASy Swiss-Prot
Match: H2AZ_CHAGB (Histone H2A.Z OS=Chaetomium globosum GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 3.515e-15
Identity = 31/53 (58.49%), Postives = 34/53 (64.15%), Query Frame = 2

Query:  383 LQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLK 541
            LQFP GRV R LK+              Y  A+LEYLTAEVLELAGNA+KDLK
Sbjct:   36 LQFPCGRVKRFLKQNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLK 88

HSP 2 Score: 33.8834 bits (76), Expect = 3.515e-15
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 3

Query:  519 GMLARI*KVKRITPRHLQLAIR 584
            G  A+  KVKRITPRHLQLAIR
Sbjct:   81 GNAAKDLKVKRITPRHLQLAIR 102

HSP 3 Score: 29.261 bits (64), Expect = 3.515e-15
Identity = 14/24 (58.33%), Postives = 17/24 (70.83%), Query Frame = 1

Query:  574 LLSEGDEKLDTLI*GTIAGGRIIP 645
            L   GDE+LDTLI  TIA G ++P
Sbjct:   99 LAIRGDEELDTLIRATIAFGGVLP 122

[Close]

BLAST of EY679662 vs. ExPASy Swiss-Prot
Match: H2AZ_NEOFI (Histone H2A.Z OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=htz1 PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 5.916e-15
Identity = 31/53 (58.49%), Postives = 33/53 (62.26%), Query Frame = 2

Query:  383 LQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLK 541
            LQFP GRV R LK               Y  A+LEYLTAEVLELAGNA+KDLK
Sbjct:   32 LQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLK 84

HSP 2 Score: 33.8834 bits (76), Expect = 5.916e-15
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 3

Query:  519 GMLARI*KVKRITPRHLQLAIR 584
            G  A+  KVKRITPRHLQLAIR
Sbjct:   77 GNAAKDLKVKRITPRHLQLAIR 98

HSP 3 Score: 29.261 bits (64), Expect = 5.916e-15
Identity = 14/24 (58.33%), Postives = 17/24 (70.83%), Query Frame = 1

Query:  574 LLSEGDEKLDTLI*GTIAGGRIIP 645
            L   GDE+LDTLI  TIA G ++P
Sbjct:   95 LAIRGDEELDTLIRATIAFGGVLP 118

[Close]

BLAST of EY679662 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPOR (Histone H2A.Z OS=Aspergillus oryzae GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 5.916e-15
Identity = 31/53 (58.49%), Postives = 33/53 (62.26%), Query Frame = 2

Query:  383 LQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLK 541
            LQFP GRV R LK               Y  A+LEYLTAEVLELAGNA+KDLK
Sbjct:   32 LQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLK 84

HSP 2 Score: 33.8834 bits (76), Expect = 5.916e-15
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 3

Query:  519 GMLARI*KVKRITPRHLQLAIR 584
            G  A+  KVKRITPRHLQLAIR
Sbjct:   77 GNAAKDLKVKRITPRHLQLAIR 98

HSP 3 Score: 29.261 bits (64), Expect = 5.916e-15
Identity = 14/24 (58.33%), Postives = 17/24 (70.83%), Query Frame = 1

Query:  574 LLSEGDEKLDTLI*GTIAGGRIIP 645
            L   GDE+LDTLI  TIA G ++P
Sbjct:   95 LAIRGDEELDTLIRATIAFGGVLP 118

[Close]

BLAST of EY679662 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPNC (Histone H2A.Z OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 5.916e-15
Identity = 31/53 (58.49%), Postives = 33/53 (62.26%), Query Frame = 2

Query:  383 LQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLK 541
            LQFP GRV R LK               Y  A+LEYLTAEVLELAGNA+KDLK
Sbjct:   32 LQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLK 84

HSP 2 Score: 33.8834 bits (76), Expect = 5.916e-15
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 3

Query:  519 GMLARI*KVKRITPRHLQLAIR 584
            G  A+  KVKRITPRHLQLAIR
Sbjct:   77 GNAAKDLKVKRITPRHLQLAIR 98

HSP 3 Score: 29.261 bits (64), Expect = 5.916e-15
Identity = 14/24 (58.33%), Postives = 17/24 (70.83%), Query Frame = 1

Query:  574 LLSEGDEKLDTLI*GTIAGGRIIP 645
            L   GDE+LDTLI  TIA G ++P
Sbjct:   95 LAIRGDEELDTLIRATIAFGGVLP 118

The following BLAST results are available for this feature:

BLAST of EY679662 vs. ExPASy Swiss-Prot

BLAST of EY679662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34


Match Name	E-value	Identity	Description
H2AZ_SCHPO	4.361e-17	62.26	Histone H2A.Z OS=Schizosaccharomyces pombe GN=pht1...	[more]
H2AZ_USTMA	5.818e-16	62.26	Histone H2A.Z OS=Ustilago maydis GN=HTZ1 PE=3 SV=1	[more]
H2AZ_YARLI	2.107e-15	56.60	Histone H2A.Z OS=Yarrowia lipolytica GN=HTZ1 PE=3 ...	[more]
H2AZ_GIBZE	3.501e-15	58.49	Histone H2A.Z OS=Gibberella zeae GN=HTZ1 PE=3 SV=1	[more]
H2AZ_NEUCR	3.515e-15	58.49	Histone H2A.Z OS=Neurospora crassa GN=htz-1 PE=3 S...	[more]
H2AZ_MAGGR	3.515e-15	58.49	Histone H2A.Z OS=Magnaporthe grisea GN=HTZ1 PE=3 S...	[more]
H2AZ_CHAGB	3.515e-15	58.49	Histone H2A.Z OS=Chaetomium globosum GN=HTZ1 PE=3 ...	[more]
H2AZ_NEOFI	5.916e-15	58.49	Histone H2A.Z OS=Neosartorya fischeri (strain ATCC...	[more]
H2AZ_ASPOR	5.916e-15	58.49	Histone H2A.Z OS=Aspergillus oryzae GN=HTZ1 PE=3 S...	[more]
H2AZ_ASPNC	5.916e-15	58.49	Histone H2A.Z OS=Aspergillus niger (strain CBS 513...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-650-002-F07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY679662 ID=EY679662; Name=EY679662; organism=Citrus sinensis; type=EST; length=1010bp
CCACGCGTCCGTAGATTTCTTAGTGAGTCCATTATAAATGCGGTTAAGAG
TAAAGAAAATATTTAATGCTTTTTGTAAAGTGGTAAAACTTTCGACATGG
TTTTGATTGACTAATGGCATCTCTGTTTGAGCTATTTGAATGTTGACTGT
TCTTACGAGCTGGTTGTTGAGCCTGATAATATTTTTTTTTTTTTGACTTT
TGTTTCCAATGGGTGTATTTGTTATGGCAGAAGTTAGTTGCAGTAACGTT
TCCAGATTTGTAGCCTTTATCATGTCAAGGCACAGTAGGTGCCCTATTCA
AGATGTGCTCAGACAGGATTATGCAAACTCCCTGAATTTCCTTCAGTTTT
TTCGTATTGTATAAGTTAGTTACATTTGTTCCTTGCAGTTCCCAGTGGGA
AGGGTCCATCGTCTACTAAAGGAAAGGGCTGCTGCTCACGGAAGGGTTGG
CGCAACAGCTGCTGTTTATACAGCAGCCATTTTGGAATATCTAACTGCCG
AAGTGTTGGAGTTGGCAGGGAATGCTAGCAAGGATTTGAAAGGTCAAACG
TATTACTCCAAGGCATTTGCAGCTTGCTATCCGAAGGAGATGAAAAACTT
GACACTCTCATTTAAGGAACCATAGCCGGGGGAAGAATTATTCCCTCATA
TCCCCAATCCCCTCATCCATAAAATCCTCCCAAAGAGTAATTTCGTGACC
CCCTCCTCCCCTCGGCTTTTTTTATGGGTTGAATTTTTTCCTTGGCTAAA
ATATCTAAATTGAAAAATGGATGGCCAAAATTGTTTTAATGGCTAGGAAA
TCTGCTTTCCTCCCACCCACATTTTCAGGAAGCCACCAAAATTTGGGGGC
CTGGTTTTTTTCCCCATTTTGGGATTTTGAAACAGTGTTAACTCTTTTAT
TTTAAAAAAAAATTTTTAAATTCTTTTCTCCTTTTGTTTTTCTATCTTCA
AGATAAAAAACAGAAATAAAAAAAGAGGGGGGGGGGCCGCGCTTTATTAG
GGAAGAATAT