EY679658

Overview
NameEY679658
Unique NameEY679658
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1008
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679658 vs. ExPASy Swiss-Prot
Match: ICS_CATRO (Isochorismate synthase, chloroplastic OS=Catharanthus roseus PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 3.241e-58
Identity = 111/191 (58.12%), Postives = 138/191 (72.25%), Query Frame = 2
Query:   56 RYQSCSLSMAMMNGCKGDPRLPVGIIDSCTLPAVPSPALALEKLHSAIFGLKSNPPPFTSGIIRLQVPIEEQIQAIDWLHAQHQ--LLPRCFFSGRSRKKDSDI-SVVFPNGNGQSSVTH-----------NLVSVAGVGSAVFFRNLHPFSYNDWRSIKRFISTECPMIRAYGAMRFDARANISSEWERF 586
            +Y  CS S++M NGC GDPR PVG I++ TLPAV +PALA+E+L SA+  LKS  P   SGIIRL+VPIEE I+A+DWLH+Q Q  LLPRC+FSGRS+   SD  S    N NG ++  H           NLVSVAGVGSAV FR+ +PFS++DW SIKRF+S  CP+IRAYGA+RFDAR +I+ EW+ F
Sbjct:   45 KYIFCSTSLSM-NGCNGDPRAPVGTIETRTLPAVSTPALAMERLSSAVANLKSTLPSAQSGIIRLEVPIEEHIEALDWLHSQDQKNLLPRCYFSGRSQVTFSDFTSNDLTNRNGSAANGHLQRISTSSDDKNLVSVAGVGSAVLFRSPNPFSFDDWLSIKRFLSKNCPLIRAYGAIRFDARPHIAPEWKAF 234          

HSP 2 Score: 40.817 bits (94), Expect = 3.241e-58
Identity = 19/35 (54.29%), Postives = 24/35 (68.57%), Query Frame = 3
Query:  579 KDFGSFYFMIPQILNDRLSFDELERSSTLAVTLAW 683
            K FGSFYF++PQ+      FDEL  SS +A T+AW
Sbjct:  232 KAFGSFYFVVPQV-----EFDELHGSSMIAATVAW 261          
BLAST of EY679658 vs. ExPASy Swiss-Prot
Match: ICS2_ARATH (Isochorismate synthase 2, chloroplastic OS=Arabidopsis thaliana GN=ICS2 PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 4.600e-57
Identity = 106/189 (56.08%), Postives = 138/189 (73.02%), Query Frame = 2
Query:   20 VSSRHSLQKFHHRYQSCSLSMAMMNGCKGDPRLPVGIIDSCTLPAVPSPALALEKLHSAIFGLKSNPPPFTSGIIRLQVPIEEQIQAIDWLHAQHQLLPRCFFSGRSRKKDSDISVVFPNGNGQSSVTHNLVSVAGVGSAVFFRNLHPFSYNDWRSIKRFISTECPMIRAYGAMRFDARANISSEWERF 586
            +SSR S Q+F      C+LSM   NGC+ D + P+G +++ TL  VPSPA A E+L +A+  LKS PPPF+SGI+RLQVPIE++I AIDWLHAQ+++LPR FFS RS     D+   F + NG S   HN VSVAG+GSAVFFR+L PFS++DWRSI+RF+S++ P+IRAYG +RFD    I+ EWE F
Sbjct:   35 LSSRVSRQRFLR----CTLSM---NGCEADHKAPLGTVETRTLSTVPSPAAATERLITAVSDLKSQPPPFSSGIVRLQVPIEQKIGAIDWLHAQNEILPRSFFSRRSDSGRPDLLQDFSSDNGSSD--HNPVSVAGIGSAVFFRDLDPFSHDDWRSIRRFLSSKSPLIRAYGGLRFDPTGKIAVEWEHF 214          

HSP 2 Score: 37.3502 bits (85), Expect = 4.600e-57
Identity = 18/33 (54.55%), Postives = 21/33 (63.64%), Query Frame = 3
Query:  585 FGSFYFMIPQILNDRLSFDELERSSTLAVTLAW 683
            FGSFYF +PQ+      FDE   SS LA T+AW
Sbjct:  214 FGSFYFTVPQV-----EFDEFGGSSMLAATVAW 241          
BLAST of EY679658 vs. ExPASy Swiss-Prot
Match: ICS1_ARATH (Isochorismate synthase 1, chloroplastic OS=Arabidopsis thaliana GN=ICS1 PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 2.456e-55
Identity = 107/205 (52.20%), Postives = 140/205 (68.29%), Query Frame = 2
Query:    2 HASAQPVSSRHSLQKF----HHRYQSCSLSMAMMNGCKGDPRLPVGIIDSCTLPAVPSPALALEKLHSAIFGLKSNPPPFTSGIIRLQVPIEEQIQAIDWLHAQHQLLPRCFFSGRSRKKDSDISVVFP------NGNGQSSVTHNLVSVAGVGSAVFFRNLHPFSYNDWRSIKRFISTECPMIRAYGAMRFDARANISSEWERF 586
            H+S   +S  +S   F      +Y+SCS+SM   NGC GD + P+G +++ T+ AV SPA A E+L SA+  LKS PP F+SG++RLQVPI++QI AIDWL AQ+++ PRCFFS RS     D+ +         NGNG  S   NLVSVAG+GSAVFFR+L PFS++DWRSI+RF+S+  P+IRAYG MRFD    I+ EWE F
Sbjct:   18 HSSIISISRSYSPTPFTRFSRKKYESCSMSM---NGCDGDFKTPLGTVETRTMTAVLSPAAATERLISAVSELKSQPPSFSSGVVRLQVPIDQQIGAIDWLQAQNEIQPRCFFSRRSDVGRPDLLLDLANENGNGNGNGTVSSDRNLVSVAGIGSAVFFRDLDPFSHDDWRSIRRFLSSTSPLIRAYGGMRFDPNGKIAVEWEPF 219          

HSP 2 Score: 34.6538 bits (78), Expect = 2.456e-55
Identity = 16/33 (48.48%), Postives = 21/33 (63.64%), Query Frame = 3
Query:  585 FGSFYFMIPQILNDRLSFDELERSSTLAVTLAW 683
            FG+FYF +PQ+      F+E   SS LA T+AW
Sbjct:  219 FGAFYFSVPQV-----EFNEFGGSSMLAATIAW 246          
The following BLAST results are available for this feature:
BLAST of EY679658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ICS_CATRO3.241e-5858.12Isochorismate synthase, chloroplastic OS=Catharant... [more]
ICS2_ARATH4.600e-5756.08Isochorismate synthase 2, chloroplastic OS=Arabido... [more]
ICS1_ARATH2.456e-5552.20Isochorismate synthase 1, chloroplastic OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-F03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679658 ID=EY679658; Name=EY679658; organism=Citrus sinensis; type=EST; length=1008bp
CCACGCGTCCGCCCAACCAGTTTCCAGCAGGCACTCCCTTCAAAAATTTC
ACCATAGATATCAATCGTGTTCATTGTCCATGGCCATGATGAATGGTTGC
AAAGGAGACCCTCGGCTGCCTGTGGGTATCATTGACAGTTGTACGTTACC
TGCAGTTCCATCTCCAGCGCTGGCCTTGGAGAAACTTCACTCTGCCATTT
TCGGGTTGAAATCCAACCCACCTCCATTCACCTCTGGCATCATAAGGCTA
CAAGTGCCTATTGAAGAACAAATCCAAGCAATTGATTGGCTCCATGCTCA
GCACCAACTTCTTCCACGCTGTTTCTTTTCTGGTCGAAGCCGAAAAAAGG
ATTCTGATATTTCCGTTGTCTTTCCCAACGGTAATGGCCAAAGCTCAGTC
ACCCACAATTTGGTCAGCGTAGCTGGTGTGGGGTCTGCTGTCTTCTTCCG
AAATCTCCATCCATTTTCTTACAATGATTGGAGGTCTATTAAGAGGTTTA
TCTCTACAGAATGCCCTATGATTCGCGCTTACGGGGCAATGCGTTTCGAT
GCAAGGGCCAATATATCATCTGAATGGGAAAGATTTTGGTTCCTTCTACT
TTATGATTCCTCAGATACTAAATGACAGGTTGAGTTTTGATGAGCTTGAA
CGGAGTTCTACGCTTGCTGTCACTCTTGCATGGGGACGAAGCCCTTTTCC
GGAAATGGGCAAAGGCCCATTTCCACACTTGAATCCTCAAGGGGAAAAGG
TTTCTTCCAAAAATGTAAGGGTTTAAAAAAAAATTTTCAAGAAATTTTAT
CCTTAAGTAATCCTCCAAACTCCCAATAAAAAATCATTGGGGGATCTTTG
TTGTTAAAAAAACTTTTGGAAAAAATTTAAATAAAAATTAACCACCCCCT
CTTTCCCAGGGGGCCTTAAAATCCCCGCGAAGCCCCCAAAAATAAAATAA
TGGGCCATAATGGATATTTTTGTTCTTCTAATAAACATGGGTTTTTATTT
GTTGTTTT
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